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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:22.9 nTPM
HPA Brain:136.6 nTPM
GTEx:22.9 nTPM
FANTOM5:117.8 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:3.1 nTPM
Allen mouse:0.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA019010Antibody HPA019070Antibody HPA026643
Glial cells Not detectedNot detectedLow
Neuronal cells LowNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 85.7
2481 Female, age 94, left hemisphere 114.9
2289 Male, age 61, right hemisphere 114.2
2290 Female, age 72, unknown 92.7
1854 Male, age 80, left hemisphere 84.0
1857 Female, age 85, left hemisphere 74.7
1781 Male, age 74, unknown 72.8
2288 Male, age 75, left hemisphere 70.0
2846 Female, age 79, unknown 62.1
Globus pallidus, externus
nTPM: 114.9
2646 Male, age 61, right hemisphere 192.8
1996 Male, age 80, right hemisphere 110.9
2772 Female, age 79, unknown 100.2
2395 Male, age 75, both hemispheres 86.9
2567 Female, age 72, unknown 83.7
Globus pallidus, internus
nTPM: 102.9
2111 Female, age 85, right hemisphere 124.2
2483 Female, age 94, right hemisphere 112.4
2778 Female, age 91, both hemispheres 110.6
2037 Male, age 80, right hemisphere 104.2
1818 Male, age 74, unknown 97.5
2287 Male, age 75, right hemisphere 86.9
2566 Female, age 72, unknown 84.8
Nucleus accumbens
nTPM: 80.2
2732 Male, age 80, right hemisphere 104.4
2391 Female, age 94, left hemisphere 87.2
2824 Male, age 61, right hemisphere 87.2
2698 Female, age 72, unknown 83.7
2286 Male, age 75, left hemisphere 75.0
1806 Female, age 85, left hemisphere 74.9
1856 Female, age 91, right hemisphere 65.0
1783 Male, age 74, unknown 63.9
Nucleus basalis of Meynert
nTPM: 136.6
2569 Male, age 61, both hemispheres 217.1
2393 Male, age 80, right hemisphere 119.7
2484 Female, age 94, left hemisphere 105.4
2821 Male, age 75, both hemispheres 104.1
Nucleus of the diagonal band
nTPM: 114.5
1812 Female, age 91, both hemispheres 190.5
1979 Male, age 74, unknown 118.0
2775 Male, age 80, right hemisphere 94.4
2195 Female, age 85, both hemispheres 92.9
2029 Male, age 61, right hemisphere 76.7
Putamen
nTPM: 82.9
2647 Male, age 75, left hemisphere 112.2
2489 Female, age 72, unknown 102.1
2482 Female, age 94, left hemisphere 96.8
1829 Male, age 74, unknown 80.4
1937 Female, age 91, right hemisphere 65.3
1838 Male, age 80, right hemisphere 64.3
2466 Female, age 79, unknown 59.3
Septal nuclei
nTPM: 127.7
2199 Male, age 80, right hemisphere 199.7
2009 Female, age 91, both hemispheres 149.8
2059 Female, age 85, both hemispheres 145.7
2629 Female, age 94, right hemisphere 126.5
2394 Male, age 61, left hemisphere 113.1
1960 Male, age 74, unknown 79.8
2031 Female, age 72, unknown 79.5
Stria terminalis, bed nucleus
nTPM: 90.1
1974 Female, age 91, both hemispheres 99.4
2201 Male, age 74, unknown 88.6
2486 Female, age 94, both hemispheres 82.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 22.9
Samples: 246

Max nTPM: 55.2
Min nTPM: 6.1
Std nTPM: 9.6
Median nTPM: 21.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 55.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 52.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 52.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 51.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 51.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 49.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 48.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 47.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 46.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 44.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 44.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 43.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 43.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 42.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 42.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 39.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 38.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 38.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 38.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 38.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 37.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 36.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 36.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 35.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 34.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 34.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 34.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 33.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 33.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 32.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 32.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 32.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 32.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 31.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 31.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 31.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 31.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 30.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 30.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 30.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 30.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 30.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 30.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 29.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 29.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 29.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 29.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 29.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 29.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 28.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 28.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 28.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 28.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 28.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 28.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 28.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 28.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 27.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 27.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 27.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 27.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 27.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 27.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 27.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 27.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 27.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 26.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 26.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 26.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 26.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 26.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 26.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 25.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 25.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 25.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 25.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 25.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 25.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 25.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 25.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 25.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 25.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 24.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 24.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 24.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 24.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 24.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 23.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 23.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 23.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 23.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 23.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 23.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 23.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 23.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 23.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 23.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 23.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 23.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 23.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 22.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 22.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 22.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 22.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 22.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 22.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 22.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 21.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 21.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 21.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 21.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 21.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 21.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 21.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 21.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 21.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 21.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 21.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 21.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 21.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 21.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 21.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 21.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 21.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 20.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 20.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 20.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 20.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 20.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 20.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 20.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 20.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 20.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 20.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 20.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 20.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 20.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 20.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 19.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 19.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 19.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 19.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 19.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 19.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 19.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 19.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 19.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 19.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 19.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 19.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 19.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 19.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 19.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 19.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 19.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 18.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 18.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 18.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 18.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 18.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 18.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 18.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 18.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 17.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 17.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 17.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 17.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 17.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 17.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 17.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 17.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 17.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 17.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 17.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 17.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 17.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 16.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 16.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 16.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 16.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 16.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 16.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 16.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 16.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 16.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 15.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 15.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 15.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 15.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 15.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 15.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 15.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 15.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 15.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 14.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 14.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 14.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 14.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 14.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 14.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 14.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 14.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 14.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 14.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 14.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 13.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 13.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 13.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 13.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 13.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 13.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 13.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 12.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 12.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 12.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 12.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 12.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 12.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 12.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 11.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 11.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 11.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 11.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 11.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 11.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 11.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 11.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 11.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 11.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 11.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 10.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 10.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 10.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 10.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 10.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 9.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 9.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 9.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 8.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 8.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 7.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 7.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 6.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 6.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 20.1
Samples: 246

Max nTPM: 57.6
Min nTPM: 5.1
Std nTPM: 8.7
Median nTPM: 18.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 57.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 49.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 48.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 46.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 45.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 44.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 42.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 40.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 40.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 40.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 39.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 38.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 38.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 37.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 36.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 36.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 35.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 35.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 35.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 34.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 34.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 34.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 33.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 33.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 32.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 32.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 32.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 32.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 32.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 32.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 31.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 31.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 31.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 29.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 29.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 29.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 29.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 28.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 28.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 27.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 27.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 27.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 27.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 27.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 27.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 27.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 26.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 26.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 25.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 25.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 25.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 25.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 25.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 25.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 24.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 24.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 24.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 24.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 24.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 24.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 23.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 23.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 23.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 23.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 23.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 22.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 22.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 22.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 22.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 22.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 22.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 22.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 22.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 21.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 21.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 21.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 21.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 21.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 21.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 20.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 20.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 20.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 20.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 20.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 20.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 20.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 20.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 20.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 20.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 19.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 19.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 19.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 19.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 19.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 19.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 19.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 19.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 19.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 19.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 19.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 19.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 19.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 18.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 18.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 18.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 18.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 18.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 18.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 18.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 18.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 18.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 18.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 18.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 18.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 18.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 18.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 18.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 18.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 18.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 18.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 18.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 18.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 18.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 18.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 17.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 17.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 17.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 17.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 17.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 17.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 17.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 17.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 17.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 17.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 17.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 17.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 17.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 17.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 17.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 17.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 16.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 16.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 16.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 16.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 16.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 16.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 16.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 16.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 16.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 16.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 16.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 16.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 15.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 15.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 15.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 15.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 15.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 15.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 15.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 15.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 15.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 15.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 15.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 15.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 15.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 15.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 15.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 15.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 15.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 15.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 15.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 15.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 15.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 14.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 14.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 14.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 14.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 14.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 14.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 14.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 14.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 14.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 14.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 14.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 14.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 14.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 14.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 14.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 13.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 13.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 13.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 13.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 13.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 13.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 13.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 13.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 13.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 13.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 13.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 13.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 13.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 13.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 13.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 13.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 13.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 13.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 12.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 12.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 12.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 12.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 12.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 12.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 12.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 12.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 12.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 11.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 11.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 11.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 11.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 11.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 11.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 11.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 11.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 11.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 11.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 11.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 10.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 10.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 10.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 10.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 10.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 10.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 10.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 9.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 9.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 9.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 9.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 9.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 9.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 8.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 8.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 8.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 8.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 7.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 7.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 5.1
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Brain - Putamen (basal ganglia)
Average nTPM: 19.5
Samples: 205

Max nTPM: 47.5
Min nTPM: 4.2
Std nTPM: 7.5
Median nTPM: 18.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 47.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 46.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 43.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 38.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 38.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 36.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 35.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 35.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 32.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 32.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 31.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 31.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 31.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 31.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 31.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 31.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 31.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 31.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 30.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 29.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 29.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 29.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 29.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 28.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 28.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 28.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 27.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 27.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 27.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 27.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 26.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 26.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 26.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 26.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 26.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 25.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 25.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 25.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 25.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 25.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 25.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 25.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 24.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 24.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 24.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 24.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 24.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 24.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 24.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 24.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 23.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 23.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 23.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 23.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 23.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 23.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 23.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 23.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 23.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 22.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 22.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 22.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 22.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 22.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 22.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 21.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 21.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 21.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 21.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 21.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 21.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 21.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 21.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 21.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 21.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 21.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 20.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 20.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 20.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 20.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 20.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 20.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 20.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 20.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 20.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 20.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 19.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 19.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 19.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 19.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 19.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 19.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 19.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 19.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 19.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 19.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 19.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 19.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 19.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 19.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 18.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 18.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 18.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 18.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 18.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 18.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 18.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 18.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 18.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 18.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 18.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 18.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 17.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 17.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 17.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 17.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 17.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 17.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 17.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 17.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 17.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 16.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 16.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 16.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 16.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 16.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 16.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 16.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 16.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 16.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 16.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 16.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 16.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 15.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 15.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 15.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 15.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 15.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 15.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 15.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 15.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 15.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 15.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 15.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 15.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 15.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 15.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 14.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 14.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 14.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 14.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 14.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 14.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 14.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 14.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 14.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 14.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 14.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 13.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 13.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 13.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 13.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 13.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 13.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 13.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 13.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 12.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 12.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 12.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 12.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 12.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 12.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 12.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 12.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 11.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 11.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 11.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 11.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 11.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 11.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 11.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 11.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 10.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 10.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 10.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 10.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 10.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 10.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 10.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 10.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 9.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 9.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 9.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 9.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 9.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 8.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 8.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 8.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 8.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 7.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 7.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 7.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 6.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 4.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

117.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 88.9
FF:10164-103B2 76 years, female 88.9
Nucleus accumbens
Scaled Tags Per Million: 79.7
FF:10037-101F1 23-56 years, mixed 79.7
Putamen
Scaled Tags Per Million: 78.6
FF:10176-103C5 60 years, female 78.6
Globus pallidus
Scaled Tags Per Million: 117.8
FF:10161-103A8 76 years, female 131.3
FF:10175-103C4 60 years, female 104.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.2
Pig sample Sample description nTPM
Caudate
nTPM: 26.8
Samples: 4

Max nTPM: 31.5
Min nTPM: 20.8
Sample A Female 20.8
Sample B Female 24.0
Sample C Male 31.5
Sample D Male 30.9
Putamen
nTPM: 25.9
Samples: 4

Max nTPM: 34.4
Min nTPM: 20.4
Sample A Female 20.4
Sample B Female 20.4
Sample C Male 34.4
Sample D Male 28.5
Septum
nTPM: 27.3
Samples: 4

Max nTPM: 36.1
Min nTPM: 20.3
Sample A Female 20.3
Sample B Female 25.2
Sample C Male 36.1
Sample D Male 27.4
Ventral pallidum
nTPM: 26.3
Samples: 4

Max nTPM: 30.8
Min nTPM: 17.1
Sample A Female 17.1
Sample B Female 30.8
Sample C Male 30.7
Sample D Male 26.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 3.0
Samples: 4

Max nTPM: 3.5
Min nTPM: 2.5
Sample A Male 2.5
Sample B Male 2.6
Sample C Female 3.5
Sample D Female 3.4
Septum
nTPM: 1.9
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.3
Sample A Male 2.4
Sample B Male 1.3
Sample C Female 1.7
Sample D Female 2.1
Ventral forebrain
nTPM: 3.1
Samples: 4

Max nTPM: 3.2
Min nTPM: 3.0
Sample A Male 3.0
Sample B Male 3.1
Sample C Female 3.2
Sample D Female 3.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.3
70812687 Antisense, RP_050712_02_D08, Mouse strain C57BL/6J (56 days, male) 0.5
68523294 Antisense, RP_050118_02_E01, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
70812687 Antisense, RP_050712_02_D08, Mouse strain C57BL/6J (56 days, male) 0.2
68523294 Antisense, RP_050118_02_E01, Mouse strain C57BL/6J (56 days, male) 0.1

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