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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
386.0
nTPM
GTEx:
386.0
nTPM
FANTOM5:
90.4
Scaled Tags Per Million
Pig:
68.9
nTPM
Mouse:
610.5
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
386.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 386.0
Samples: 105
Max nTPM: 565.0
Min nTPM: 255.9
Std nTPM: 56.2
Median nTPM: 0.0
375_1
74 years, female
565.0
237_1
82 years, male
526.6
379_1
60 years, male
518.5
386_1
76 years, male
506.1
265_1
87 years, male
494.7
396_1
62 years, male
492.2
246_1
77 years, male
474.6
384_1
83 years, male
466.8
313_1
79 years, female
464.3
229_1
69 years, female
460.5
447_1
81 years, male
456.5
243_1
75 years, male
456.4
322_1
76 years, male
455.3
452_1
88 years, female
455.2
35_1
74 years, female
447.3
389_1
86 years, female
445.0
321_1
62 years, female
442.6
217_1
76 years, male
442.1
162_1
79 years, female
440.9
120_1
70 years, female
440.3
354_1
81 years, female
437.9
4_1
88 years, female
435.8
6_1
73 years, female
433.7
347_1
72 years, male
430.2
377_1
82 years, female
429.0
254_1
77 years, female
427.6
315_1
62 years, female
424.8
142_1
61 years, female
419.9
153_1
70 years, female
418.1
394_1
75 years, female
416.3
42_1
85 years, male
412.9
177_1
74 years, male
409.4
172_1
72 years, female
407.8
490_1
67 years, female
403.7
218_1
71 years, female
402.1
414_1
84 years, female
401.2
99_1
64 years, male
398.8
17_1
71 years, male
393.9
307_1
66 years, female
393.3
264_1
73 years, female
393.1
115_1
83 years, male
391.9
468_1
89 years, male
390.6
352_1
62 years, male
389.5
319_1
81 years, male
387.2
189_1
76 years, male
386.9
173_1
67 years, male
386.8
117_1
61 years, male
385.2
499_1
55 years, female
382.2
81_1
67 years, male
381.9
145_1
84 years, male
381.1
286_1
68 years, female
380.5
324_1
76 years, male
379.3
351_1
91 years, male
379.0
501_1
88 years, male
376.2
415_1
77 years, female
375.3
425_1
59 years, female
375.3
376_1
75 years, female
374.5
266_1
85 years, male
374.4
119_1
70 years, female
373.2
163_1
78 years, male
369.7
109_1
81 years, female
369.2
491_1
89 years, female
368.3
506_1
65 years, male
366.7
126_1
63 years, male
365.2
404_1
82 years, female
365.2
466_1
57 years, female
363.1
288_1
66 years, female
361.0
480_1
63 years, male
360.8
355_1
70 years, female
360.2
526_1
61 years, male
358.8
335_1
73 years, female
357.7
308_1
70 years, female
356.5
311_1
78 years, male
355.9
9_1
66 years, female
355.5
2_1
77 years, female
354.7
518_1
75 years, female
352.7
349_1
83 years, male
349.0
348_1
84 years, male
348.7
503_1
68 years, male
348.3
405_1
91 years, male
347.7
356_1
87 years, female
344.6
353_1
82 years, female
344.3
413_1
59 years, female
343.0
350_1
84 years, female
342.6
43_1
64 years, female
340.7
295_1
61 years, female
339.3
32_1
67 years, male
338.8
137_1
83 years, male
336.9
406_1
79 years, male
336.2
316_1
62 years, male
333.7
18_1
88 years, male
330.1
495_1
57 years, female
328.1
317_1
60 years, male
327.0
320_1
89 years, female
327.0
314_1
67 years, male
324.2
41_1
94 years, female
321.3
139_1
64 years, female
317.5
251_1
78 years, male
314.2
89_1
63 years, male
311.5
291_1
76 years, male
302.7
517_1
88 years, male
300.6
318_1
68 years, male
291.9
149_1
88 years, male
276.6
292_1
71 years, male
275.2
293_1
68 years, female
255.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.