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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
54.2
nTPM
Monaco:
104.5
nTPM
Schmiedel:
2.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.2
HPA sample
nTPM
gdT-cell nTPM: 20.1
Samples: 6
Max nTPM: 25.0
Min nTPM: 13.1
P10809_1007
13.1
P10809_1022
23.7
P10809_1041
17.9
P10809_1060
17.0
P10809_1077
25.0
P10809_1098
23.9
MAIT T-cell nTPM: 47.0
Samples: 6
Max nTPM: 53.8
Min nTPM: 34.6
P10809_1006
51.8
P10809_1024
53.8
P10809_1043
34.6
P10809_1062
45.8
P10809_1083
48.0
P10809_1097
48.1
Memory CD4 T-cell nTPM: 37.6
Samples: 6
Max nTPM: 47.0
Min nTPM: 23.3
P10809_1014
47.0
P10809_1026
43.4
P10809_1045
39.8
P10809_1064
23.3
P10809_1086
29.5
P10809_1113
42.8
Memory CD8 T-cell nTPM: 39.2
Samples: 5
Max nTPM: 57.0
Min nTPM: 15.3
P10809_1012
57.0
P10809_1027
36.1
P10809_1046
46.2
P10809_1065
15.3
P10809_1111
41.5
Naive CD4 T-cell nTPM: 51.8
Samples: 6
Max nTPM: 71.1
Min nTPM: 40.3
P10809_1015
51.6
P10809_1030
42.9
P10809_1049
40.3
P10809_1068
71.1
P10809_1085
45.7
P10809_1112
59.0
Naive CD8 T-cell nTPM: 42.6
Samples: 6
Max nTPM: 60.4
Min nTPM: 22.4
P10809_1016
60.4
P10809_1031
55.0
P10809_1050
40.0
P10809_1069
22.4
P10809_1087
23.4
P10809_1110
54.4
T-reg nTPM: 54.2
Samples: 6
Max nTPM: 66.0
Min nTPM: 40.0
P10809_1018
66.0
P10809_1037
65.4
P10809_1056
53.6
P10809_1075
50.1
P10809_1094
50.3
P10809_1106
40.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.0
Samples: 4
Max nTPM: 119.4
Min nTPM: 66.3
RHH5202_R3573
66.3
RHH5230_R3602
119.4
RHH5259_R3631
99.2
RHH5288_R3660
95.0
Effector memory CD8 T-cell nTPM: 81.6
Samples: 4
Max nTPM: 95.9
Min nTPM: 69.8
RHH5203_R3574
84.7
RHH5231_R3603
69.8
RHH5260_R3632
95.9
RHH5289_R3661
75.9
MAIT T-cell nTPM: 101.6
Samples: 4
Max nTPM: 114.1
Min nTPM: 84.2
RHH5233_R3605
111.1
RHH5205_R3576
97.1
RHH5262_R3634
84.2
RHH5297_R3663
114.1
Memory CD4 T-cell TFH nTPM: 83.2
Samples: 4
Max nTPM: 112.0
Min nTPM: 55.4
RHH5300_R3666
112.0
RHH5236_R3608
55.4
RHH5265_R3637
91.6
RHH5208_R3579
73.7
Memory CD4 T-cell Th1 nTPM: 99.8
Samples: 4
Max nTPM: 111.6
Min nTPM: 93.4
RHH5210_R3581
111.6
RHH5302_R3668
98.4
RHH5238_R3610
95.7
RHH5267_R3639
93.4
Memory CD4 T-cell Th1/Th17 nTPM: 102.1
Samples: 4
Max nTPM: 114.0
Min nTPM: 95.0
RHH5303_R3669
103.6
RHH5211_R3582
114.0
RHH5239_R3611
95.6
RHH5268_R3640
95.0
Memory CD4 T-cell Th17 nTPM: 93.9
Samples: 4
Max nTPM: 124.9
Min nTPM: 70.4
RHH5304_R3670
124.9
RHH5212_R3583
70.4
RHH5240_R3612
105.1
RHH5269_R3641
75.2
Memory CD4 T-cell Th2 nTPM: 70.5
Samples: 4
Max nTPM: 82.7
Min nTPM: 58.7
RHH5305_R3671
82.7
RHH5213_R3584
60.4
RHH5241_R3613
80.3
RHH5270_R3642
58.7
Naive CD4 T-cell nTPM: 104.5
Samples: 4
Max nTPM: 121.9
Min nTPM: 83.2
RHH5306_R3672
113.8
RHH5214_R3585
83.2
RHH5242_R3614
121.9
RHH5271_R3643
99.2
Naive CD8 T-cell nTPM: 102.8
Samples: 4
Max nTPM: 125.7
Min nTPM: 62.2
RHH5201_R3572
62.2
RHH5229_R3601
100.2
RHH5258_R3630
123.1
RHH5287_R3659
125.7
Non-Vd2 gdTCR nTPM: 56.5
Samples: 4
Max nTPM: 65.8
Min nTPM: 48.4
RHH5235_R3607
65.8
RHH5264_R3636
60.1
RHH5207_R3578
48.4
RHH5299_R3665
51.8
T-reg nTPM: 97.4
Samples: 4
Max nTPM: 106.1
Min nTPM: 85.1
RHH5301_R3667
97.6
RHH5237_R3609
106.1
RHH5266_R3638
100.7
RHH5209_R3580
85.1
Terminal effector memory CD4 T-cell nTPM: 45.6
Samples: 2
Max nTPM: 48.1
Min nTPM: 43.0
RHH5243_R3615
48.1
RHH5272_R3644
43.0
Terminal effector memory CD8 T-cell nTPM: 51.7
Samples: 4
Max nTPM: 74.0
Min nTPM: 22.7
RHH5232_R3604
74.0
RHH5204_R3575
22.7
RHH5261_R3633
47.5
RHH5296_R3662
62.4
Vd2 gdTCR nTPM: 81.2
Samples: 4
Max nTPM: 128.6
Min nTPM: 25.7
RHH5234_R3606
89.0
RHH5206_R3577
25.7
RHH5263_R3635
128.6
RHH5298_R3664
81.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
