We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CHN1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CHN1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:130.5 nTPM
HPA Brain:210.7 nTPM
GTEx:130.5 nTPM
Pig:126.2 nTPM
Mouse:91.7 nTPM
Allen mouse:11.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

210.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 203.1
2226 Male, age 75, left hemisphere 269.8
1961 Female, age 42, unknown 136.5
Dorsomedial nucleus
nTPM: 159.9
1989 Male, age 62, unknown 221.5
2041 Female, age 72, unknown 130.7
2017 Female, age 42, unknown 127.4
Lateral hypothalamic area
nTPM: 210.7
2271 Male, age 75, both hemispheres 303.8
2228 Male, age 66, unknown 225.2
1791 Male, age 80, right hemisphere 217.6
2412 Male, age 62, unknown 96.1
Mammillary body
nTPM: 137.9
1923 Female, age 72, unknown 180.7
2413 Male, age 66, unknown 146.9
1948 Female, age 72, unknown 130.9
1945 Male, age 80, right hemisphere 129.7
1834 Female, age 42, unknown 101.0
Paraventricular nucleus
nTPM: 121.4
2700 Male, age 62, unknown 121.4
Preoptic area
nTPM: 125.1
1907 Male, age 80, right hemisphere 152.4
2414 Female, age 72, unknown 124.2
1861 Female, age 42, unknown 98.6
Supraoptic nucleus
nTPM: 117.8
1894 Female, age 72, unknown 159.1
2835 Female, age 72, unknown 107.2
2043 Male, age 62, unknown 87.0
Ventromedial nucleus
nTPM: 166.3
1982 Female, age 72, unknown 184.8
1822 Female, age 42, unknown 147.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 130.5
Samples: 257

Max nTPM: 891.1
Min nTPM: 39.6
Std nTPM: 86.6
Median nTPM: 111.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 891.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 609.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 604.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 501.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 498.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 361.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 346.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 304.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 295.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 279.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 254.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 248.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 243.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 222.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 220.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 218.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 205.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 202.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 201.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 200.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 197.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 189.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 188.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 184.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 184.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 183.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 182.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 181.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 177.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 177.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 176.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 175.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 174.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 174.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 174.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 173.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 173.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 168.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 168.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 166.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 164.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 161.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 160.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 160.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 160.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 158.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 157.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 157.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 157.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 155.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 155.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 154.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 153.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 152.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 151.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 150.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 150.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 149.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 149.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 147.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 146.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 146.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 146.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 146.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 146.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 146.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 145.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 145.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 144.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 144.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 143.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 143.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 141.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 140.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 139.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 139.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 137.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 137.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 137.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 136.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 136.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 135.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 135.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 134.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 134.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 133.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 132.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 132.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 132.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 132.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 131.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 130.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 129.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 129.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 129.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 128.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 126.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 125.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 125.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 125.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 125.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 125.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 124.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 124.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 123.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 123.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 123.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 123.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 121.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 121.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 120.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 119.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 119.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 118.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 118.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 116.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 116.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 115.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 115.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 115.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 114.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 114.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 113.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 113.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 112.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 112.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 112.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 112.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 111.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 111.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 110.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 110.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 110.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 110.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 109.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 109.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 108.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 108.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 107.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 107.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 106.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 105.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 105.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 105.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 105.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 104.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 104.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 104.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 104.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 103.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 103.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 103.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 103.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 103.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 102.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 102.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 102.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 101.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 101.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 101.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 101.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 100.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 100.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 100.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 100.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 99.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 99.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 99.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 99.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 98.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 98.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 98.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 98.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 98.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 97.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 97.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 96.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 95.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 95.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 95.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 95.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 94.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 94.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 94.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 94.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 93.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 93.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 93.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 92.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 92.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 91.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 91.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 90.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 90.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 89.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 89.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 88.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 87.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 86.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 86.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 85.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 85.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 84.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 83.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 82.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 81.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 80.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 80.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 79.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 79.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 79.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 78.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 78.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 78.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 77.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 77.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 77.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 76.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 76.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 76.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 75.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 75.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 75.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 75.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 74.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 74.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 73.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 73.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 73.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 73.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 72.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 71.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 71.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 71.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 70.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 68.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 68.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 68.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 67.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 67.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 65.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 64.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 63.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 63.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 62.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 62.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 61.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 59.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 57.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 54.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 54.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 50.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 43.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 43.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 42.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 42.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 39.6
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 126.2
Samples: 4

Max nTPM: 174.7
Min nTPM: 88.5
Sample A Female 174.7
Sample B Female 144.7
Sample C Male 96.9
Sample D Male 88.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 91.8
Samples: 4

Max nTPM: 106.6
Min nTPM: 84.8
Sample A Male 89.3
Sample B Male 106.6
Sample C Female 86.3
Sample D Female 84.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.2
69838711 Antisense, RP_050317_04_F05, Mouse strain C57BL/6J (56 days, male) 13.9
73718053 Antisense, RP_051121_04_C07, Mouse strain C57BL/6J (56 days, male) 8.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo