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  • TISSUE

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  • LSM4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:100.6 nTPM
HPA Brain:77.3 nTPM
GTEx:100.6 nTPM
Pig:40.9 nTPM
Mouse:29.3 nTPM
Allen mouse:3.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 56.3
2226 Male, age 75, left hemisphere 64.6
1961 Female, age 42, unknown 47.9
Dorsomedial nucleus
nTPM: 61.1
1989 Male, age 62, unknown 80.4
2041 Female, age 72, unknown 60.4
2017 Female, age 42, unknown 42.3
Lateral hypothalamic area
nTPM: 77.3
1791 Male, age 80, right hemisphere 95.2
2271 Male, age 75, both hemispheres 77.6
2228 Male, age 66, unknown 75.7
2412 Male, age 62, unknown 60.8
Mammillary body
nTPM: 65.5
1923 Female, age 72, unknown 79.6
2413 Male, age 66, unknown 71.5
1945 Male, age 80, right hemisphere 63.1
1948 Female, age 72, unknown 62.1
1834 Female, age 42, unknown 51.4
Paraventricular nucleus
nTPM: 51.1
2700 Male, age 62, unknown 51.1
Preoptic area
nTPM: 59.1
1907 Male, age 80, right hemisphere 65.9
2414 Female, age 72, unknown 57.3
1861 Female, age 42, unknown 54.0
Supraoptic nucleus
nTPM: 62.4
2835 Female, age 72, unknown 71.3
1894 Female, age 72, unknown 59.2
2043 Male, age 62, unknown 56.8
Ventromedial nucleus
nTPM: 55.3
1982 Female, age 72, unknown 63.1
1822 Female, age 42, unknown 47.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 100.6
Samples: 257

Max nTPM: 230.6
Min nTPM: 27.7
Std nTPM: 25.3
Median nTPM: 96.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 230.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 196.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 177.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 177.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 172.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 170.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 165.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 165.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 160.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 157.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 152.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 149.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 143.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 141.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 139.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 138.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 137.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 137.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 137.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 136.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 136.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 134.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 132.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 132.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 131.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 130.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 129.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 129.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 129.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 128.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 127.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 126.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 126.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 125.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 125.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 125.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 124.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 124.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 124.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 124.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 124.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 124.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 123.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 123.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 123.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 120.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 120.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 119.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 119.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 119.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 119.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 118.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 118.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 118.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 117.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 116.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 115.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 115.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 114.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 114.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 114.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 113.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 113.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 113.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 113.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 112.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 112.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 111.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 111.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 111.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 110.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 110.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 110.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 110.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 110.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 109.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 109.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 109.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 108.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 108.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 108.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 108.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 108.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 107.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 106.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 106.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 106.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 106.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 106.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 105.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 104.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 104.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 104.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 104.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 104.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 104.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 103.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 102.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 102.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 102.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 102.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 102.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 102.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 101.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 101.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 101.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 101.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 100.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 100.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 100.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 100.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 99.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 99.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 98.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 98.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 98.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 98.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 98.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 98.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 97.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 97.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 97.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 97.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 97.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 97.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 97.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 97.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 96.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 96.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 96.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 96.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 96.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 96.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 95.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 95.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 95.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 95.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 95.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 95.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 94.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 94.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 94.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 94.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 94.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 94.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 93.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 93.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 93.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 93.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 92.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 92.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 92.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 92.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 92.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 91.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 91.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 91.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 90.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 90.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 90.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 90.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 90.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 90.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 89.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 89.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 89.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 88.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 88.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 88.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 87.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 87.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 87.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 86.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 86.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 86.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 86.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 86.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 86.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 86.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 86.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 86.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 85.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 85.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 85.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 85.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 84.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 84.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 84.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 84.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 84.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 84.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 83.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 83.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 83.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 83.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 83.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 83.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 82.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 82.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 82.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 82.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 82.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 81.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 81.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 81.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 80.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 80.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 80.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 80.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 80.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 80.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 80.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 79.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 79.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 79.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 79.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 79.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 78.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 78.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 77.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 76.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 76.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 76.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 76.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 76.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 76.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 76.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 74.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 74.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 74.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 74.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 73.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 73.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 73.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 72.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 72.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 72.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 71.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 71.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 70.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 69.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 69.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 69.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 69.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 67.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 66.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 65.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 63.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 63.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 63.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 62.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 62.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 62.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 60.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 59.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 58.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 27.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 40.9
Samples: 4

Max nTPM: 53.3
Min nTPM: 32.0
Sample A Female 53.3
Sample B Female 39.7
Sample C Male 38.5
Sample D Male 32.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 29.3
Samples: 4

Max nTPM: 31.0
Min nTPM: 27.4
Sample A Male 29.8
Sample B Male 31.0
Sample C Female 27.4
Sample D Female 28.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.8
68637844 Antisense, RP_050126_01_G02, Mouse strain C57BL/6J (56 days, male) 3.8

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