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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1173.2
nTPM
Monaco:
354.3
nTPM
Schmiedel:
323.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1173.2
HPA sample
nTPM
gdT-cell nTPM: 701.9
Samples: 6
Max nTPM: 818.4
Min nTPM: 572.1
P10809_1007
679.0
P10809_1022
794.6
P10809_1041
818.4
P10809_1060
572.1
P10809_1077
662.6
P10809_1098
684.8
MAIT T-cell nTPM: 869.9
Samples: 6
Max nTPM: 1027.5
Min nTPM: 663.2
P10809_1006
663.2
P10809_1024
1027.5
P10809_1043
975.4
P10809_1062
829.5
P10809_1083
764.4
P10809_1097
959.1
Memory CD4 T-cell nTPM: 933.3
Samples: 6
Max nTPM: 1162.6
Min nTPM: 754.0
P10809_1014
819.6
P10809_1026
1162.6
P10809_1045
1060.8
P10809_1064
871.6
P10809_1086
754.0
P10809_1113
931.2
Memory CD8 T-cell nTPM: 833.3
Samples: 5
Max nTPM: 990.0
Min nTPM: 709.2
P10809_1012
709.2
P10809_1027
919.2
P10809_1046
990.0
P10809_1065
787.3
P10809_1111
760.8
Naive CD4 T-cell nTPM: 1173.2
Samples: 6
Max nTPM: 1527.3
Min nTPM: 989.8
P10809_1015
989.8
P10809_1030
1358.6
P10809_1049
1527.3
P10809_1068
1092.7
P10809_1085
1019.8
P10809_1112
1051.1
Naive CD8 T-cell nTPM: 971.7
Samples: 6
Max nTPM: 1163.2
Min nTPM: 686.1
P10809_1016
1163.2
P10809_1031
1023.2
P10809_1050
1017.6
P10809_1069
991.7
P10809_1087
686.1
P10809_1110
948.6
T-reg nTPM: 1109.3
Samples: 6
Max nTPM: 1408.6
Min nTPM: 801.3
P10809_1018
801.3
P10809_1037
1219.1
P10809_1056
1408.6
P10809_1075
953.5
P10809_1094
1171.3
P10809_1106
1101.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
354.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 232.9
Samples: 4
Max nTPM: 320.2
Min nTPM: 151.5
RHH5202_R3573
151.5
RHH5230_R3602
201.2
RHH5259_R3631
258.8
RHH5288_R3660
320.2
Effector memory CD8 T-cell nTPM: 136.1
Samples: 4
Max nTPM: 195.7
Min nTPM: 75.7
RHH5203_R3574
142.1
RHH5231_R3603
130.9
RHH5260_R3632
195.7
RHH5289_R3661
75.7
MAIT T-cell nTPM: 205.2
Samples: 4
Max nTPM: 269.5
Min nTPM: 172.5
RHH5233_R3605
172.5
RHH5205_R3576
188.1
RHH5262_R3634
190.7
RHH5297_R3663
269.5
Memory CD4 T-cell TFH nTPM: 259.7
Samples: 4
Max nTPM: 407.7
Min nTPM: 196.9
RHH5300_R3666
235.9
RHH5236_R3608
407.7
RHH5265_R3637
196.9
RHH5208_R3579
198.1
Memory CD4 T-cell Th1 nTPM: 317.2
Samples: 4
Max nTPM: 455.2
Min nTPM: 178.8
RHH5210_R3581
178.8
RHH5302_R3668
455.2
RHH5238_R3610
370.6
RHH5267_R3639
264.3
Memory CD4 T-cell Th1/Th17 nTPM: 255.6
Samples: 4
Max nTPM: 329.1
Min nTPM: 216.6
RHH5303_R3669
329.1
RHH5211_R3582
229.0
RHH5239_R3611
216.6
RHH5268_R3640
247.6
Memory CD4 T-cell Th17 nTPM: 224.9
Samples: 4
Max nTPM: 287.5
Min nTPM: 199.3
RHH5304_R3670
287.5
RHH5212_R3583
204.5
RHH5240_R3612
199.3
RHH5269_R3641
208.3
Memory CD4 T-cell Th2 nTPM: 255.2
Samples: 4
Max nTPM: 321.4
Min nTPM: 207.3
RHH5305_R3671
321.4
RHH5213_R3584
220.8
RHH5241_R3613
271.1
RHH5270_R3642
207.3
Naive CD4 T-cell nTPM: 354.3
Samples: 4
Max nTPM: 504.6
Min nTPM: 229.1
RHH5306_R3672
422.1
RHH5214_R3585
504.6
RHH5242_R3614
261.4
RHH5271_R3643
229.1
Naive CD8 T-cell nTPM: 271.4
Samples: 4
Max nTPM: 296.8
Min nTPM: 209.0
RHH5201_R3572
209.0
RHH5229_R3601
296.7
RHH5258_R3630
296.8
RHH5287_R3659
282.9
Non-Vd2 gdTCR nTPM: 198.5
Samples: 4
Max nTPM: 264.2
Min nTPM: 130.5
RHH5235_R3607
189.7
RHH5264_R3636
209.4
RHH5207_R3578
130.5
RHH5299_R3665
264.2
T-reg nTPM: 271.6
Samples: 4
Max nTPM: 377.8
Min nTPM: 232.1
RHH5301_R3667
377.8
RHH5237_R3609
232.1
RHH5266_R3638
233.5
RHH5209_R3580
243.0
Terminal effector memory CD4 T-cell nTPM: 185.8
Samples: 2
Max nTPM: 189.0
Min nTPM: 182.6
RHH5243_R3615
182.6
RHH5272_R3644
189.0
Terminal effector memory CD8 T-cell nTPM: 271.0
Samples: 4
Max nTPM: 533.1
Min nTPM: 133.1
RHH5232_R3604
133.1
RHH5204_R3575
533.1
RHH5261_R3633
221.5
RHH5296_R3662
196.3
Vd2 gdTCR nTPM: 318.1
Samples: 4
Max nTPM: 450.5
Min nTPM: 198.2
RHH5234_R3606
213.2
RHH5206_R3577
450.5
RHH5263_R3635
198.2
RHH5298_R3664
410.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.