We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
EMC7
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • EMC7
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:84.9 nTPM
HPA Brain:69.3 nTPM
GTEx:84.9 nTPM
Pig:70.6 nTPM
Mouse:50.3 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 69.3
2226 Male, age 75, left hemisphere 82.8
1961 Female, age 42, unknown 55.8
Dorsomedial nucleus
nTPM: 54.6
2041 Female, age 72, unknown 68.2
2017 Female, age 42, unknown 48.0
1989 Male, age 62, unknown 47.7
Lateral hypothalamic area
nTPM: 62.0
1791 Male, age 80, right hemisphere 80.3
2228 Male, age 66, unknown 62.6
2271 Male, age 75, both hemispheres 57.6
2412 Male, age 62, unknown 47.5
Mammillary body
nTPM: 63.0
1923 Female, age 72, unknown 80.9
2413 Male, age 66, unknown 60.8
1948 Female, age 72, unknown 60.4
1945 Male, age 80, right hemisphere 59.6
1834 Female, age 42, unknown 53.3
Paraventricular nucleus
nTPM: 53.8
2700 Male, age 62, unknown 53.8
Preoptic area
nTPM: 57.3
1907 Male, age 80, right hemisphere 70.5
1861 Female, age 42, unknown 50.8
2414 Female, age 72, unknown 50.4
Supraoptic nucleus
nTPM: 67.1
1894 Female, age 72, unknown 79.8
2043 Male, age 62, unknown 64.6
2835 Female, age 72, unknown 56.9
Ventromedial nucleus
nTPM: 55.7
1982 Female, age 72, unknown 59.5
1822 Female, age 42, unknown 51.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 84.9
Samples: 257

Max nTPM: 190.1
Min nTPM: 44.7
Std nTPM: 18.4
Median nTPM: 84.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 190.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 136.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 135.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 129.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 123.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 121.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 121.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 121.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 121.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 120.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 118.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 118.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 117.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 114.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 113.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 113.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 111.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 109.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 109.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 109.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 108.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 108.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 107.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 106.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 105.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 105.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 105.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 104.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 104.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 104.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 104.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 104.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 103.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 102.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 102.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 102.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 102.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 102.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 101.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 101.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 101.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 101.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 101.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 101.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 100.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 100.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 100.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 100.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 100.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 99.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 99.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 99.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 99.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 99.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 99.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 98.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 98.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 98.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 98.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 97.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 97.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 97.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 96.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 96.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 96.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 96.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 95.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 95.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 95.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 94.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 94.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 94.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 93.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 93.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 93.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 93.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 93.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 93.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 93.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 92.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 92.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 92.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 92.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 91.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 91.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 91.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 91.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 91.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 90.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 90.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 90.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 90.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 90.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 90.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 90.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 90.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 90.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 90.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 90.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 89.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 89.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 89.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 89.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 88.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 88.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 88.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 88.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 87.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 87.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 87.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 87.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 87.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 87.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 86.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 86.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 86.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 86.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 86.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 85.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 85.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 85.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 85.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 84.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 84.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 84.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 84.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 84.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 84.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 84.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 84.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 83.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 83.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 83.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 83.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 83.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 82.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 82.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 82.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 82.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 82.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 82.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 82.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 82.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 82.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 81.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 81.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 81.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 81.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 81.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 81.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 81.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 81.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 81.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 81.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 80.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 80.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 80.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 79.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 79.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 79.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 78.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 78.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 78.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 78.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 77.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 77.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 77.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 77.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 77.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 77.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 76.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 76.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 76.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 76.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 75.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 75.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 75.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 75.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 75.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 74.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 74.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 74.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 73.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 73.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 73.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 73.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 73.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 73.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 73.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 72.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 72.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 72.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 72.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 71.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 71.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 71.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 71.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 71.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 71.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 70.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 70.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 70.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 70.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 70.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 70.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 70.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 69.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 69.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 69.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 69.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 68.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 68.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 68.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 68.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 67.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 67.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 66.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 66.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 66.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 66.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 66.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 66.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 66.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 66.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 66.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 65.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 64.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 64.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 64.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 64.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 64.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 64.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 63.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 62.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 61.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 61.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 59.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 58.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 58.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 57.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 57.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 56.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 56.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 56.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 55.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 55.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 54.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 53.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 53.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 53.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 52.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 50.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 50.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 47.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 45.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 44.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 44.7
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 70.6
Samples: 4

Max nTPM: 84.9
Min nTPM: 59.0
Sample A Female 84.9
Sample B Female 70.9
Sample C Male 67.7
Sample D Male 59.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 50.3
Samples: 4

Max nTPM: 53.9
Min nTPM: 47.6
Sample A Male 47.6
Sample B Male 53.9
Sample C Female 50.8
Sample D Female 48.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
71493129 Antisense, RP_050913_02_C01, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo