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TMEM258
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  • TMEM258
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:103.3 nTPM
HPA Brain:50.8 nTPM
GTEx:103.3 nTPM
FANTOM5:116.7 Scaled Tags Per Million
Pig:31.0 nTPM
Mouse:103.0 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044602
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 37.5
2481 Female, age 94, left hemisphere 42.0
2846 Female, age 79, unknown 41.4
1857 Female, age 85, left hemisphere 40.6
1854 Male, age 80, left hemisphere 40.4
2288 Male, age 75, left hemisphere 39.0
1781 Male, age 74, unknown 37.6
2290 Female, age 72, unknown 30.8
2289 Male, age 61, right hemisphere 28.0
Globus pallidus, externus
nTPM: 48.5
1996 Male, age 80, right hemisphere 67.3
2772 Female, age 79, unknown 65.3
2395 Male, age 75, both hemispheres 46.7
2646 Male, age 61, right hemisphere 38.3
2567 Female, age 72, unknown 24.8
Globus pallidus, internus
nTPM: 50.8
2778 Female, age 91, both hemispheres 62.5
2483 Female, age 94, right hemisphere 57.8
2287 Male, age 75, right hemisphere 57.3
1818 Male, age 74, unknown 54.9
2037 Male, age 80, right hemisphere 47.9
2111 Female, age 85, right hemisphere 40.5
2566 Female, age 72, unknown 34.8
Nucleus accumbens
nTPM: 39.4
2286 Male, age 75, left hemisphere 45.6
2391 Female, age 94, left hemisphere 45.0
1856 Female, age 91, right hemisphere 40.7
2698 Female, age 72, unknown 40.7
1806 Female, age 85, left hemisphere 38.9
2732 Male, age 80, right hemisphere 36.4
1783 Male, age 74, unknown 35.6
2824 Male, age 61, right hemisphere 32.3
Nucleus basalis of Meynert
nTPM: 37.6
2821 Male, age 75, both hemispheres 39.5
2484 Female, age 94, left hemisphere 39.1
2569 Male, age 61, both hemispheres 38.3
2393 Male, age 80, right hemisphere 33.7
Nucleus of the diagonal band
nTPM: 37.4
1812 Female, age 91, both hemispheres 49.2
2775 Male, age 80, right hemisphere 38.6
2195 Female, age 85, both hemispheres 34.6
1979 Male, age 74, unknown 32.7
2029 Male, age 61, right hemisphere 32.0
Putamen
nTPM: 34.2
2482 Female, age 94, left hemisphere 44.0
1937 Female, age 91, right hemisphere 41.1
2466 Female, age 79, unknown 36.9
2647 Male, age 75, left hemisphere 33.9
1829 Male, age 74, unknown 30.5
1838 Male, age 80, right hemisphere 30.2
2489 Female, age 72, unknown 23.1
Septal nuclei
nTPM: 36.7
1960 Male, age 74, unknown 43.1
2394 Male, age 61, left hemisphere 39.0
2031 Female, age 72, unknown 38.5
2009 Female, age 91, both hemispheres 35.4
2199 Male, age 80, right hemisphere 34.9
2059 Female, age 85, both hemispheres 33.1
2629 Female, age 94, right hemisphere 33.0
Stria terminalis, bed nucleus
nTPM: 30.4
1974 Female, age 91, both hemispheres 37.6
2201 Male, age 74, unknown 27.3
2486 Female, age 94, both hemispheres 26.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 91.0
Samples: 246

Max nTPM: 231.7
Min nTPM: 49.7
Std nTPM: 24.7
Median nTPM: 88.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 231.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 190.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 182.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 172.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 165.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 154.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 153.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 151.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 141.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 140.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 134.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 131.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 130.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 125.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 124.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 123.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 123.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 123.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 122.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 121.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 121.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 120.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 120.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 119.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 119.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 118.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 118.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 117.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 117.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 117.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 116.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 116.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 116.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 116.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 113.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 113.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 113.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 111.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 110.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 110.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 110.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 109.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 109.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 109.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 109.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 108.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 108.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 108.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 107.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 106.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 106.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 106.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 105.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 104.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 104.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 104.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 103.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 103.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 103.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 102.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 102.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 102.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 102.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 101.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 101.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 100.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 100.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 100.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 100.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 100.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 99.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 99.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 98.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 98.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 98.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 98.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 97.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 97.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 97.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 97.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 97.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 97.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 97.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 97.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 97.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 96.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 95.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 95.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 95.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 95.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 94.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 94.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 94.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 94.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 94.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 94.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 94.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 94.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 93.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 93.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 93.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 93.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 93.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 92.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 91.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 91.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 90.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 90.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 90.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 90.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 89.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 89.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 89.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 89.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 89.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 89.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 89.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 88.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 88.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 88.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 88.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 88.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 88.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 87.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 87.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 87.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 87.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 87.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 86.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 86.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 85.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 85.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 85.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 84.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 83.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 83.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 83.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 82.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 82.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 82.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 82.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 82.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 82.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 81.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 81.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 81.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 81.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 81.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 80.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 80.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 80.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 80.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 79.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 79.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 79.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 79.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 79.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 79.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 79.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 79.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 79.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 79.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 78.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 78.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 78.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 78.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 78.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 78.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 78.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 78.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 78.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 77.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 77.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 77.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 77.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 77.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 77.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 77.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 77.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 77.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 76.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 75.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 75.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 75.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 75.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 75.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 75.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 74.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 74.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 74.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 74.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 74.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 73.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 73.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 73.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 73.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 72.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 72.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 72.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 72.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 71.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 71.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 69.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 69.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 68.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 68.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 68.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 68.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 67.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 67.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 66.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 66.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 66.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 65.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 65.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 65.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 64.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 64.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 64.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 63.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 63.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 63.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 62.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 62.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 62.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 61.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 61.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 61.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 61.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 60.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 60.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 59.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 59.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 58.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 58.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 55.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 54.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 53.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 53.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 53.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 52.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 51.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 51.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 49.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 89.9
Samples: 246

Max nTPM: 275.2
Min nTPM: 39.3
Std nTPM: 29.3
Median nTPM: 83.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 275.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 232.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 204.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 192.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 158.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 156.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 154.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 153.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 150.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 149.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 148.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 144.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 140.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 140.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 139.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 138.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 136.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 133.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 132.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 131.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 130.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 127.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 125.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 125.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 124.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 124.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 123.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 122.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 121.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 121.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 116.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 116.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 115.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 112.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 112.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 111.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 111.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 110.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 109.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 109.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 109.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 108.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 108.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 108.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 108.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 107.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 106.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 105.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 105.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 105.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 104.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 104.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 104.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 103.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 103.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 103.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 103.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 102.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 102.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 101.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 101.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 101.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 100.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 100.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 99.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 99.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 99.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 99.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 99.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 99.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 98.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 98.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 98.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 98.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 98.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 97.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 97.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 97.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 96.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 96.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 95.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 95.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 95.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 95.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 94.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 94.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 94.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 94.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 94.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 93.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 93.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 93.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 92.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 92.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 92.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 91.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 91.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 91.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 90.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 90.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 89.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 88.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 88.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 88.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 88.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 87.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 87.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 87.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 87.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 87.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 87.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 86.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 86.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 85.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 85.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 85.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 85.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 84.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 84.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 84.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 84.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 83.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 83.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 83.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 83.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 83.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 82.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 82.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 82.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 82.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 82.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 81.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 81.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 81.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 81.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 81.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 81.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 81.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 80.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 80.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 80.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 80.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 80.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 79.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 79.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 79.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 79.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 79.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 78.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 78.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 78.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 78.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 78.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 78.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 78.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 77.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 77.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 77.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 77.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 76.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 76.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 76.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 75.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 75.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 75.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 75.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 75.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 75.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 74.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 74.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 74.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 74.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 73.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 73.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 73.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 73.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 73.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 73.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 73.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 73.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 72.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 72.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 72.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 72.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 71.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 71.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 71.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 70.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 70.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 69.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 69.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 69.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 69.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 69.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 68.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 68.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 68.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 68.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 68.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 68.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 67.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 67.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 67.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 67.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 66.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 65.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 65.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 65.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 65.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 64.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 64.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 64.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 64.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 64.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 63.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 63.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 62.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 62.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 62.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 62.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 61.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 60.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 60.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 59.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 59.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 59.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 58.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 58.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 58.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 57.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 57.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 57.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 56.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 56.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 56.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 55.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 54.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 54.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 54.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 54.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 53.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 52.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 50.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 46.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 45.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 39.3
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Brain - Putamen (basal ganglia)
Average nTPM: 103.3
Samples: 205

Max nTPM: 270.5
Min nTPM: 39.8
Std nTPM: 26.6
Median nTPM: 100.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 270.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 214.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 172.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 165.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 164.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 159.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 157.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 154.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 151.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 149.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 148.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 146.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 144.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 142.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 140.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 140.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 139.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 138.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 136.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 134.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 133.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 131.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 130.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 130.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 130.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 127.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 127.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 127.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 126.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 124.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 124.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 124.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 122.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 122.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 121.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 121.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 121.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 121.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 121.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 120.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 120.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 119.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 119.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 118.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 118.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 118.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 117.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 117.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 117.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 116.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 116.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 115.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 115.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 115.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 115.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 114.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 114.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 113.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 113.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 113.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 113.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 112.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 112.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 112.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 112.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 110.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 109.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 109.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 109.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 109.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 109.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 108.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 108.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 108.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 108.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 107.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 107.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 107.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 106.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 106.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 105.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 105.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 105.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 105.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 104.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 104.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 104.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 103.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 103.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 103.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 103.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 102.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 102.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 102.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 102.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 102.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 101.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 101.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 101.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 101.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 100.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 100.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 100.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 100.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 99.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 98.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 98.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 98.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 98.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 97.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 97.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 97.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 96.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 96.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 96.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 96.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 95.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 95.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 95.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 94.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 94.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 94.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 94.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 94.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 94.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 94.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 94.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 93.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 93.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 92.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 92.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 92.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 92.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 91.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 91.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 91.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 90.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 90.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 90.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 90.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 89.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 89.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 89.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 89.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 89.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 89.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 88.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 88.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 88.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 88.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 87.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 87.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 87.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 87.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 87.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 86.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 86.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 86.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 86.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 86.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 85.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 85.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 85.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 85.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 84.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 84.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 83.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 83.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 83.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 83.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 82.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 82.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 81.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 81.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 81.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 80.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 79.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 78.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 77.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 77.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 77.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 77.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 76.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 76.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 76.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 75.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 75.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 73.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 73.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 71.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 71.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 71.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 70.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 69.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 67.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 67.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 66.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 66.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 65.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 64.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 62.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 59.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 58.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 45.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 39.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

116.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 56.5
FF:10164-103B2 76 years, female 56.5
Nucleus accumbens
Scaled Tags Per Million: 55.1
FF:10037-101F1 23-56 years, mixed 55.1
Putamen
Scaled Tags Per Million: 57.6
FF:10176-103C5 60 years, female 57.6
Globus pallidus
Scaled Tags Per Million: 116.7
FF:10175-103C4 60 years, female 157.7
FF:10161-103A8 76 years, female 75.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.0
Pig sample Sample description nTPM
Caudate
nTPM: 21.9
Samples: 4

Max nTPM: 23.5
Min nTPM: 18.7
Sample A Female 23.5
Sample B Female 22.8
Sample C Male 22.4
Sample D Male 18.7
Putamen
nTPM: 31.0
Samples: 4

Max nTPM: 41.7
Min nTPM: 21.1
Sample A Female 41.7
Sample B Female 21.1
Sample C Male 33.0
Sample D Male 28.3
Septum
nTPM: 26.6
Samples: 4

Max nTPM: 32.1
Min nTPM: 23.0
Sample A Female 32.1
Sample B Female 24.2
Sample C Male 26.9
Sample D Male 23.0
Ventral pallidum
nTPM: 24.9
Samples: 4

Max nTPM: 30.3
Min nTPM: 18.2
Sample A Female 18.2
Sample B Female 30.3
Sample C Male 25.7
Sample D Male 25.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 103.0
Samples: 4

Max nTPM: 108.7
Min nTPM: 101.0
Sample A Male 101.0
Sample B Male 108.7
Sample C Female 101.0
Sample D Female 101.1
Septum
nTPM: 87.2
Samples: 4

Max nTPM: 92.9
Min nTPM: 78.5
Sample A Male 78.5
Sample B Male 85.3
Sample C Female 92.0
Sample D Female 92.9
Ventral forebrain
nTPM: 86.4
Samples: 4

Max nTPM: 95.9
Min nTPM: 73.5
Sample A Male 73.5
Sample B Male 85.2
Sample C Female 95.9
Sample D Female 91.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
74635126 Antisense, RP_060215_03_D06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
74635126 Antisense, RP_060215_03_D06, Mouse strain C57BL/6J (56 days, male) 0.0

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