HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:110.1 nTPM
HPA Brain:38.9 nTPM
GTEx:110.1 nTPM
FANTOM5:66.3 Scaled Tags Per Million
Pig:28.7 nTPM
Mouse:86.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044602
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.9
Sample id Sample description nTPM
Hippocampus
nTPM: 36.2
1898 Male, age 80, left hemisphere 45.2
1855 Male, age 76, left hemisphere 38.4
1911 Female, age 85, right hemisphere 37.7
2529 Female, age 94, left hemisphere 35.5
2621 Female, age 67, right hemisphere 34.8
2148 Female, age 91, left hemisphere 25.5
Dentate gyrus
nTPM: 33.9
2530 Female, age 94, left hemisphere 39.8
2010 Male, age 76, both hemispheres 37.2
1927 Female, age 91, both hemispheres 34.1
2528 Male, age 74, both hemispheres 33.5
2246 Female, age 85, both hemispheres 30.6
2531 Female, age 67, both hemispheres 28.4
Entorhinal gyrus
nTPM: 36.4
2117 Female, age 91, right hemisphere 46.2
1938 Female, age 85, left hemisphere 39.6
2764 Male, age 80, right hemisphere 35.9
2686 Male, age 75, right hemisphere 34.6
1787 Male, age 76, left hemisphere 33.7
2613 Female, age 94, left hemisphere 28.3
Hippocampus, CA1
nTPM: 37.1
2749 Male, age 80, left hemisphere 45.2
1873 Female, age 85, both hemispheres 37.4
2082 Female, age 91, right hemisphere 36.9
2527 Male, age 74, both hemispheres 34.4
2045 Male, age 76, both hemispheres 31.8
Hippocampus, CA2
nTPM: 38.1
2249 Male, age 74, both hemispheres 49.4
1963 Male, age 80, left hemisphere 41.8
1892 Male, age 76, both hemispheres 38.8
1940 Female, age 85, left hemisphere 34.1
2113 Female, age 91, right hemisphere 33.0
2437 Female, age 94, left hemisphere 31.8
Hippocampus, CA3
nTPM: 32.7
1867 Male, age 76, both hemispheres 42.1
1891 Female, age 85, both hemispheres 40.1
2436 Male, age 74, both hemispheres 39.1
2137 Male, age 80, left hemisphere 32.3
2620 Female, age 94, left hemisphere 23.0
2861 Female, age 67, both hemispheres 20.0
Parahippocampal cortex
nTPM: 33.7
2018 Male, age 76, both hemispheres 40.3
1933 Female, age 85, both hemispheres 39.8
1850 Male, age 80, both hemispheres 38.6
1990 Female, age 91, right hemisphere 37.9
2692 Male, age 74, both hemispheres 34.4
2250 Female, age 67, right hemisphere 33.6
2532 Female, age 72, left hemisphere 33.2
2245 Female, age 91, both hemispheres 29.7
2693 Female, age 94, both hemispheres 29.0
2622 Female, age 67, right hemisphere 21.0
Perirhinal gyrus
nTPM: 36.6
1794 Male, age 80, right hemisphere 40.6
1841 Female, age 85, right hemisphere 40.3
1847 Female, age 91, left hemisphere 39.8
2521 Female, age 94, right hemisphere 31.1
2848 Male, age 76, right hemisphere 31.1
Subiculum
nTPM: 38.9
1977 Female, age 85, both hemispheres 48.0
1901 Male, age 80, both hemispheres 46.2
2042 Male, age 76, both hemispheres 42.6
2619 Male, age 74, both hemispheres 35.5
2729 Female, age 91, right hemisphere 31.4
2438 Female, age 94, left hemisphere 29.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 110.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 110.1
Samples: 197

Max nTPM: 213.1
Min nTPM: 57.0
Std nTPM: 26.4
Median nTPM: 106.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 213.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 204.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 194.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 190.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 173.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 171.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 169.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 167.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 163.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 157.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 156.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 66.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.3
FF:10169-103B7 60 years, female 68.5
FF:10153-102I9 76 years, female 64.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.7
Pig sample Sample description nTPM
Subiculum
nTPM: 20.6
Samples: 4

Max nTPM: 27.5
Min nTPM: 14.9
Sample A Female 27.5
Sample B Female 21.3
Sample C Male 14.9
Sample D Male 18.5
Dorsal hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 43.0
Min nTPM: 16.6
Sample A Female 43.0
Sample B Female 23.6
Sample C Male 31.4
Sample D Male 16.6
Entorhinal cortex
nTPM: 20.9
Samples: 4

Max nTPM: 27.2
Min nTPM: 16.8
Sample A Female 20.6
Sample B Female 27.2
Sample C Male 19.0
Sample D Male 16.8
Ventral hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 27.1
Min nTPM: 15.6
Sample A Female 26.7
Sample B Female 15.6
Sample C Male 27.1
Sample D Male 23.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 86.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.1
Samples: 4

Max nTPM: 80.0
Min nTPM: 63.4
Sample A Male 73.6
Sample B Male 75.5
Sample C Female 80.0
Sample D Female 63.4
Hippocampal formation
nTPM: 86.1
Samples: 4

Max nTPM: 99.8
Min nTPM: 74.5
Sample A Male 99.8
Sample B Male 84.2
Sample C Female 85.7
Sample D Female 74.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74635126 Antisense, RP_060215_03_D06, Mouse strain C57BL/6J (56 days, male) 0.0

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