HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.4 nTPM
HPA:28.4 nTPM
GTEx:46.0 nTPM
FANTOM5:35.7 Scaled Tags Per Million
Pig:20.2 nTPM
Mouse:5.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011271Antibody HPA011272Antibody CAB013023Antibody CAB035987Antibody CAB058693
Glial cells Not detectedNot detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedMediumNot detectedNot detected











HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.4
Sample id Sample description nTPM
Hippocampus
nTPM: 24.8
1898 Male, age 80, left hemisphere 26.0
2529 Female, age 94, left hemisphere 25.6
1855 Male, age 76, left hemisphere 25.5
2621 Female, age 67, right hemisphere 25.2
1911 Female, age 85, right hemisphere 24.7
2148 Female, age 91, left hemisphere 21.7
Dentate gyrus
nTPM: 26.3
2010 Male, age 76, both hemispheres 35.8
2528 Male, age 74, both hemispheres 26.8
2530 Female, age 94, left hemisphere 24.4
2531 Female, age 67, both hemispheres 24.4
2246 Female, age 85, both hemispheres 24.0
1927 Female, age 91, both hemispheres 22.2
Entorhinal gyrus
nTPM: 21.6
2117 Female, age 91, right hemisphere 24.9
1787 Male, age 76, left hemisphere 22.8
2686 Male, age 75, right hemisphere 21.1
1938 Female, age 85, left hemisphere 21.0
2764 Male, age 80, right hemisphere 20.1
2613 Female, age 94, left hemisphere 20.0
Hippocampus, CA1
nTPM: 24.5
2082 Female, age 91, right hemisphere 30.8
2045 Male, age 76, both hemispheres 25.0
1873 Female, age 85, both hemispheres 24.5
2527 Male, age 74, both hemispheres 22.2
2749 Male, age 80, left hemisphere 20.0
Hippocampus, CA2
nTPM: 28.4
2249 Male, age 74, both hemispheres 39.4
1940 Female, age 85, left hemisphere 33.1
2113 Female, age 91, right hemisphere 26.6
2437 Female, age 94, left hemisphere 24.6
1892 Male, age 76, both hemispheres 24.3
1963 Male, age 80, left hemisphere 22.4
Hippocampus, CA3
nTPM: 24.3
1867 Male, age 76, both hemispheres 30.7
2436 Male, age 74, both hemispheres 25.6
2137 Male, age 80, left hemisphere 22.8
2620 Female, age 94, left hemisphere 22.8
1891 Female, age 85, both hemispheres 22.1
2861 Female, age 67, both hemispheres 21.9
Parahippocampal cortex
nTPM: 22.4
2018 Male, age 76, both hemispheres 28.5
2532 Female, age 72, left hemisphere 22.9
2250 Female, age 67, right hemisphere 22.3
1990 Female, age 91, right hemisphere 22.2
2245 Female, age 91, both hemispheres 22.0
2622 Female, age 67, right hemisphere 21.9
1850 Male, age 80, both hemispheres 21.7
1933 Female, age 85, both hemispheres 21.6
2693 Female, age 94, both hemispheres 21.0
2692 Male, age 74, both hemispheres 19.9
Perirhinal gyrus
nTPM: 22.2
1841 Female, age 85, right hemisphere 23.8
2521 Female, age 94, right hemisphere 22.6
1794 Male, age 80, right hemisphere 22.4
2848 Male, age 76, right hemisphere 21.7
1847 Female, age 91, left hemisphere 20.4
Subiculum
nTPM: 23.4
2042 Male, age 76, both hemispheres 29.4
2729 Female, age 91, right hemisphere 23.9
1901 Male, age 80, both hemispheres 22.6
2438 Female, age 94, left hemisphere 21.8
2619 Male, age 74, both hemispheres 21.6
1977 Female, age 85, both hemispheres 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.0
Samples: 197

Max nTPM: 364.8
Min nTPM: 4.3
Std nTPM: 57.5
Median nTPM: 26.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 364.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 351.6
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 306.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 288.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 282.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 191.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 183.1
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 171.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 168.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 161.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 151.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.7
FF:10153-102I9 76 years, female 37.9
FF:10169-103B7 60 years, female 33.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 29.1
Min nTPM: 12.3
Sample A Female 29.1
Sample B Female 12.3
Sample C Male 25.6
Sample D Male 13.9
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 10.9
Min nTPM: 6.1
Sample A Female 10.9
Sample B Female 10.8
Sample C Male 10.5
Sample D Male 6.1
Subiculum
nTPM: 11.5
Samples: 4

Max nTPM: 17.1
Min nTPM: 6.2
Sample A Female 17.1
Sample B Female 8.4
Sample C Male 6.2
Sample D Male 14.2
Ventral hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 20.6
Min nTPM: 10.0
Sample A Female 20.6
Sample B Female 10.0
Sample C Male 11.7
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.9
Sample A Male 4.9
Sample B Male 5.2
Sample C Female 5.4
Sample D Female 4.9
Hippocampal formation
nTPM: 2.4
Samples: 4

Max nTPM: 3.5
Min nTPM: 1.4
Sample A Male 3.5
Sample B Male 1.4
Sample C Female 1.9
Sample D Female 2.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70813897 Antisense, RP_050725_02_E09, Mouse strain C57BL/6J (56 days, male) 0.3
68191372 Antisense, RP_041129_01_A09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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