HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:184.6 nTPM
HPA Brain:637.4 nTPM
GTEx:184.6 nTPM
FANTOM5:467.7 Scaled Tags Per Million
Pig:446.9 nTPM
Mouse:173.0 nTPM
Allen mouse:21.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018790Antibody HPA048800
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 637.4
Sample id Sample description nTPM
Hippocampus
nTPM: 426.3
1898 Male, age 80, left hemisphere 502.2
2621 Female, age 67, right hemisphere 500.5
2148 Female, age 91, left hemisphere 426.8
1855 Male, age 76, left hemisphere 384.8
2529 Female, age 94, left hemisphere 379.6
1911 Female, age 85, right hemisphere 364.2
Dentate gyrus
nTPM: 449.4
1927 Female, age 91, both hemispheres 521.5
2530 Female, age 94, left hemisphere 477.7
2246 Female, age 85, both hemispheres 477.3
2531 Female, age 67, both hemispheres 440.6
2528 Male, age 74, both hemispheres 405.9
2010 Male, age 76, both hemispheres 373.6
Entorhinal gyrus
nTPM: 571.9
2613 Female, age 94, left hemisphere 689.5
2764 Male, age 80, right hemisphere 670.2
1938 Female, age 85, left hemisphere 619.4
1787 Male, age 76, left hemisphere 579.5
2686 Male, age 75, right hemisphere 470.6
2117 Female, age 91, right hemisphere 402.4
Hippocampus, CA1
nTPM: 468.1
2749 Male, age 80, left hemisphere 703.5
2082 Female, age 91, right hemisphere 453.6
2527 Male, age 74, both hemispheres 415.0
1873 Female, age 85, both hemispheres 401.8
2045 Male, age 76, both hemispheres 366.4
Hippocampus, CA2
nTPM: 465.9
1892 Male, age 76, both hemispheres 547.1
1963 Male, age 80, left hemisphere 491.3
1940 Female, age 85, left hemisphere 465.9
2437 Female, age 94, left hemisphere 458.2
2113 Female, age 91, right hemisphere 424.0
2249 Male, age 74, both hemispheres 408.8
Hippocampus, CA3
nTPM: 482.0
2137 Male, age 80, left hemisphere 628.5
2620 Female, age 94, left hemisphere 613.9
2861 Female, age 67, both hemispheres 521.2
1867 Male, age 76, both hemispheres 410.9
1891 Female, age 85, both hemispheres 365.8
2436 Male, age 74, both hemispheres 351.6
Parahippocampal cortex
nTPM: 540.6
1850 Male, age 80, both hemispheres 630.2
2245 Female, age 91, both hemispheres 590.8
1990 Female, age 91, right hemisphere 568.5
2622 Female, age 67, right hemisphere 548.9
2532 Female, age 72, left hemisphere 548.2
2693 Female, age 94, both hemispheres 545.6
2250 Female, age 67, right hemisphere 543.2
1933 Female, age 85, both hemispheres 538.9
2692 Male, age 74, both hemispheres 502.9
2018 Male, age 76, both hemispheres 388.4
Perirhinal gyrus
nTPM: 637.4
1794 Male, age 80, right hemisphere 738.2
1847 Female, age 91, left hemisphere 703.9
1841 Female, age 85, right hemisphere 611.7
2848 Male, age 76, right hemisphere 584.8
2521 Female, age 94, right hemisphere 548.3
Subiculum
nTPM: 426.9
1977 Female, age 85, both hemispheres 544.0
1901 Male, age 80, both hemispheres 475.2
2619 Male, age 74, both hemispheres 460.1
2438 Female, age 94, left hemisphere 438.6
2042 Male, age 76, both hemispheres 333.8
2729 Female, age 91, right hemisphere 309.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 184.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 184.6
Samples: 255

Max nTPM: 374.4
Min nTPM: 74.7
Std nTPM: 59.4
Median nTPM: 180.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 374.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 348.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 342.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 340.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 334.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 328.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 328.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 315.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 313.8
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 313.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 312.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 467.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 467.7
FF:10169-103B7 60 years, female 525.5
FF:10153-102I9 76 years, female 410.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 446.9
Pig sample Sample description nTPM
Subiculum
nTPM: 386.5
Samples: 4

Max nTPM: 492.7
Min nTPM: 317.4
Sample A Female 492.7
Sample B Female 329.5
Sample C Male 406.3
Sample D Male 317.4
Dorsal hippocampus
nTPM: 428.6
Samples: 4

Max nTPM: 513.8
Min nTPM: 323.2
Sample A Female 498.3
Sample B Female 513.8
Sample C Male 379.1
Sample D Male 323.2
Entorhinal cortex
nTPM: 444.4
Samples: 4

Max nTPM: 514.5
Min nTPM: 403.7
Sample A Female 514.5
Sample B Female 420.1
Sample C Male 439.1
Sample D Male 403.7
Ventral hippocampus
nTPM: 446.9
Samples: 4

Max nTPM: 559.4
Min nTPM: 296.3
Sample A Female 426.0
Sample B Female 296.3
Sample C Male 559.4
Sample D Male 505.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 173.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 173.0
Samples: 4

Max nTPM: 208.3
Min nTPM: 155.9
Sample A Male 161.1
Sample B Male 166.8
Sample C Female 155.9
Sample D Female 208.3
Hippocampal formation
nTPM: 148.7
Samples: 4

Max nTPM: 164.8
Min nTPM: 131.8
Sample A Male 131.8
Sample B Male 153.8
Sample C Female 164.8
Sample D Female 144.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 21.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.8
385775 Antisense, RP_040625_01_E03, Mouse strain C57BL/6J (56 days, male) 21.8

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