HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:26.4 nTPM
HPA Brain:153.5 nTPM
GTEx:26.4 nTPM
FANTOM5:102.3 Scaled Tags Per Million
Pig:91.6 nTPM
Mouse:45.5 nTPM
Allen mouse:5.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 153.5
Sample id Sample description nTPM
Hippocampus
nTPM: 105.3
2148 Female, age 91, left hemisphere 178.1
2621 Female, age 67, right hemisphere 116.1
1911 Female, age 85, right hemisphere 98.5
1855 Male, age 76, left hemisphere 92.0
1898 Male, age 80, left hemisphere 75.9
2529 Female, age 94, left hemisphere 70.9
Dentate gyrus
nTPM: 125.4
2531 Female, age 67, both hemispheres 266.6
1927 Female, age 91, both hemispheres 172.9
2246 Female, age 85, both hemispheres 96.8
2528 Male, age 74, both hemispheres 96.6
2010 Male, age 76, both hemispheres 76.9
2530 Female, age 94, left hemisphere 42.7
Entorhinal gyrus
nTPM: 69.3
2686 Male, age 75, right hemisphere 79.9
2764 Male, age 80, right hemisphere 78.0
2613 Female, age 94, left hemisphere 75.0
1787 Male, age 76, left hemisphere 63.6
1938 Female, age 85, left hemisphere 63.4
2117 Female, age 91, right hemisphere 55.5
Hippocampus, CA1
nTPM: 111.7
2045 Male, age 76, both hemispheres 225.8
1873 Female, age 85, both hemispheres 118.3
2749 Male, age 80, left hemisphere 80.8
2527 Male, age 74, both hemispheres 71.9
2082 Female, age 91, right hemisphere 61.8
Hippocampus, CA2
nTPM: 64.2
1892 Male, age 76, both hemispheres 99.1
1940 Female, age 85, left hemisphere 65.7
2113 Female, age 91, right hemisphere 64.6
2437 Female, age 94, left hemisphere 56.0
2249 Male, age 74, both hemispheres 51.5
1963 Male, age 80, left hemisphere 48.5
Hippocampus, CA3
nTPM: 153.5
2620 Female, age 94, left hemisphere 338.3
2861 Female, age 67, both hemispheres 196.4
2137 Male, age 80, left hemisphere 114.9
1891 Female, age 85, both hemispheres 110.6
1867 Male, age 76, both hemispheres 110.2
2436 Male, age 74, both hemispheres 50.6
Parahippocampal cortex
nTPM: 78.2
2693 Female, age 94, both hemispheres 98.7
1850 Male, age 80, both hemispheres 91.3
2245 Female, age 91, both hemispheres 85.7
2622 Female, age 67, right hemisphere 83.7
1933 Female, age 85, both hemispheres 80.6
2532 Female, age 72, left hemisphere 76.9
2018 Male, age 76, both hemispheres 74.7
2692 Male, age 74, both hemispheres 69.6
2250 Female, age 67, right hemisphere 61.7
1990 Female, age 91, right hemisphere 58.6
Perirhinal gyrus
nTPM: 103.2
2521 Female, age 94, right hemisphere 111.5
1841 Female, age 85, right hemisphere 109.6
1794 Male, age 80, right hemisphere 104.6
2848 Male, age 76, right hemisphere 104.1
1847 Female, age 91, left hemisphere 86.3
Subiculum
nTPM: 72.7
2729 Female, age 91, right hemisphere 130.7
1901 Male, age 80, both hemispheres 73.0
1977 Female, age 85, both hemispheres 71.8
2619 Male, age 74, both hemispheres 63.5
2042 Male, age 76, both hemispheres 48.9
2438 Female, age 94, left hemisphere 48.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 26.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.4
Samples: 255

Max nTPM: 118.2
Min nTPM: 4.1
Std nTPM: 18.0
Median nTPM: 20.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 118.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 113.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 106.6
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 102.9
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 89.4
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 82.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 79.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 77.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 77.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 74.8
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 67.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 102.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.3
FF:10169-103B7 60 years, female 131.8
FF:10153-102I9 76 years, female 72.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 91.6
Pig sample Sample description nTPM
Subiculum
nTPM: 73.1
Samples: 4

Max nTPM: 91.3
Min nTPM: 64.2
Sample A Female 91.3
Sample B Female 66.5
Sample C Male 70.3
Sample D Male 64.2
Dorsal hippocampus
nTPM: 91.7
Samples: 4

Max nTPM: 141.3
Min nTPM: 65.6
Sample A Female 69.0
Sample B Female 90.7
Sample C Male 65.6
Sample D Male 141.3
Entorhinal cortex
nTPM: 72.5
Samples: 4

Max nTPM: 81.1
Min nTPM: 60.1
Sample A Female 81.1
Sample B Female 60.1
Sample C Male 74.6
Sample D Male 74.1
Ventral hippocampus
nTPM: 83.2
Samples: 4

Max nTPM: 90.0
Min nTPM: 74.5
Sample A Female 82.1
Sample B Female 90.0
Sample C Male 74.5
Sample D Male 86.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 45.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.2
Samples: 4

Max nTPM: 36.1
Min nTPM: 29.3
Sample A Male 30.3
Sample B Male 29.3
Sample C Female 36.1
Sample D Female 33.2
Hippocampal formation
nTPM: 45.5
Samples: 4

Max nTPM: 51.6
Min nTPM: 40.3
Sample A Male 41.9
Sample B Male 51.6
Sample C Female 48.2
Sample D Female 40.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
71496504 Antisense, RP_050913_04_F10, Mouse strain C57BL/6J (56 days, male) 5.2

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