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  • TISSUE

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  • SLAIN1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:73.7 nTPM
HPA Brain:345.6 nTPM
GTEx:73.7 nTPM
Pig:82.7 nTPM
Mouse:54.6 nTPM
Allen mouse:14.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

345.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 77.2
2226 Male, age 75, left hemisphere 97.8
1961 Female, age 42, unknown 56.7
Dorsomedial nucleus
nTPM: 146.4
2017 Female, age 42, unknown 212.2
1989 Male, age 62, unknown 149.9
2041 Female, age 72, unknown 77.2
Lateral hypothalamic area
nTPM: 232.5
2228 Male, age 66, unknown 354.5
2271 Male, age 75, both hemispheres 238.4
2412 Male, age 62, unknown 184.9
1791 Male, age 80, right hemisphere 152.1
Mammillary body
nTPM: 345.6
1945 Male, age 80, right hemisphere 440.7
1948 Female, age 72, unknown 384.9
1834 Female, age 42, unknown 378.8
1923 Female, age 72, unknown 268.1
2413 Male, age 66, unknown 255.5
Paraventricular nucleus
nTPM: 342.0
2700 Male, age 62, unknown 342.0
Preoptic area
nTPM: 250.2
2414 Female, age 72, unknown 388.8
1861 Female, age 42, unknown 257.3
1907 Male, age 80, right hemisphere 104.3
Supraoptic nucleus
nTPM: 226.7
2043 Male, age 62, unknown 298.4
1894 Female, age 72, unknown 220.4
2835 Female, age 72, unknown 161.4
Ventromedial nucleus
nTPM: 69.7
1982 Female, age 72, unknown 79.2
1822 Female, age 42, unknown 60.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 73.7
Samples: 257

Max nTPM: 314.3
Min nTPM: 16.2
Std nTPM: 54.2
Median nTPM: 54.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 314.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 302.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 279.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 263.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 263.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 233.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 225.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 223.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 217.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 193.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 191.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 188.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 188.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 184.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 181.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 176.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 173.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 169.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 167.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 163.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 162.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 155.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 154.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 150.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 148.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 143.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 142.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 142.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 139.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 138.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 136.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 135.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 135.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 135.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 132.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 131.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 131.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 128.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 125.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 123.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 123.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 123.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 119.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 117.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 116.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 116.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 114.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 110.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 109.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 107.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 106.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 105.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 104.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 102.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 102.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 100.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 99.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 99.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 98.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 98.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 97.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 96.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 95.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 94.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 92.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 92.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 91.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 90.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 89.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 88.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 87.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 86.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 84.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 83.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 82.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 81.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 81.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 81.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 81.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 81.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 80.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 79.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 79.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 78.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 78.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 78.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 77.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 77.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 76.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 75.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 74.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 73.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 72.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 71.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 70.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 70.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 70.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 68.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 67.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 67.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 66.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 66.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 66.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 65.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 65.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 64.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 64.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 64.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 64.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 64.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 64.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 64.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 64.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 62.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 62.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 62.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 62.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 62.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 62.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 61.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 60.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 59.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 59.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 59.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 56.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 56.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 55.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 55.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 54.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 54.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 53.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 53.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 52.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 52.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 52.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 51.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 50.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 49.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 49.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 48.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 47.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 47.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 47.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 47.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 47.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 47.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 47.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 47.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 46.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 46.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 46.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 46.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 45.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 45.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 45.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 44.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 44.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 44.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 43.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 43.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 43.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 43.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 42.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 42.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 42.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 42.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 41.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 41.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 41.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 41.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 41.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 40.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 40.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 40.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 39.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 38.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 38.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 38.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 37.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 37.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 37.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 37.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 37.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 36.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 36.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 36.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 35.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 35.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 35.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 35.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 35.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 35.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 35.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 34.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 34.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 34.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 33.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 33.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 33.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 33.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 33.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 33.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 33.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 33.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 32.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 32.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 32.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 31.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 31.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 31.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 31.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 31.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 31.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 31.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 31.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 31.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 30.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 30.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 30.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 30.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 30.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 30.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 30.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 30.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 29.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 29.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 29.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 29.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 29.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 29.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 28.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 28.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 28.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 28.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 28.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 28.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 28.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 28.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 27.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 27.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 27.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 26.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 26.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 25.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 25.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 24.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 24.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 23.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 23.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 22.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 21.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 21.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 20.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 20.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 20.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 19.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 16.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 82.7
Samples: 4

Max nTPM: 103.4
Min nTPM: 50.0
Sample A Female 84.4
Sample B Female 103.4
Sample C Male 92.8
Sample D Male 50.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 54.6
Samples: 4

Max nTPM: 57.9
Min nTPM: 49.0
Sample A Male 49.0
Sample B Male 54.0
Sample C Female 57.9
Sample D Female 57.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.7
68080699 Antisense, RP_040929_01_F07, Mouse strain C57BL/6J (56 days, male) 14.7

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