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  • TISSUE

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  • SRP14
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:374.9 nTPM
HPA Brain:198.4 nTPM
GTEx:374.9 nTPM
Pig:104.5 nTPM
Mouse:240.5 nTPM
Allen mouse:3.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

198.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 154.0
2226 Male, age 75, left hemisphere 193.8
1961 Female, age 42, unknown 114.1
Dorsomedial nucleus
nTPM: 115.9
2041 Female, age 72, unknown 131.5
1989 Male, age 62, unknown 112.2
2017 Female, age 42, unknown 104.0
Lateral hypothalamic area
nTPM: 156.2
2228 Male, age 66, unknown 186.8
1791 Male, age 80, right hemisphere 169.0
2271 Male, age 75, both hemispheres 161.7
2412 Male, age 62, unknown 107.3
Mammillary body
nTPM: 157.8
1948 Female, age 72, unknown 197.9
1923 Female, age 72, unknown 164.2
1945 Male, age 80, right hemisphere 152.6
2413 Male, age 66, unknown 139.6
1834 Female, age 42, unknown 134.9
Paraventricular nucleus
nTPM: 198.4
2700 Male, age 62, unknown 198.4
Preoptic area
nTPM: 142.5
2414 Female, age 72, unknown 164.3
1907 Male, age 80, right hemisphere 139.1
1861 Female, age 42, unknown 124.1
Supraoptic nucleus
nTPM: 169.2
2835 Female, age 72, unknown 178.5
2043 Male, age 62, unknown 172.8
1894 Female, age 72, unknown 156.3
Ventromedial nucleus
nTPM: 116.9
1982 Female, age 72, unknown 127.9
1822 Female, age 42, unknown 105.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

374.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 374.9
Samples: 257

Max nTPM: 761.0
Min nTPM: 238.6
Std nTPM: 72.0
Median nTPM: 366.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 761.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 739.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 701.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 687.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 597.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 552.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 534.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 529.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 528.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 523.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 514.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 513.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 491.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 487.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 482.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 469.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 467.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 463.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 461.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 459.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 458.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 457.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 455.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 455.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 455.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 447.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 445.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 443.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 442.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 442.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 441.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 439.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 436.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 436.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 434.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 433.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 431.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 428.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 428.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 427.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 423.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 421.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 420.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 419.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 418.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 417.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 417.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 416.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 416.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 414.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 413.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 411.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 410.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 410.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 410.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 409.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 409.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 408.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 407.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 407.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 407.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 404.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 403.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 403.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 403.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 398.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 398.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 397.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 397.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 397.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 397.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 396.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 396.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 396.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 396.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 395.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 394.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 394.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 393.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 392.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 392.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 391.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 391.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 390.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 390.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 389.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 388.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 387.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 386.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 385.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 384.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 384.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 383.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 383.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 383.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 382.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 382.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 381.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 381.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 379.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 379.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 378.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 378.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 377.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 377.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 376.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 376.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 376.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 375.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 375.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 374.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 374.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 374.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 374.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 373.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 373.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 373.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 373.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 371.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 371.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 370.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 370.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 370.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 369.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 369.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 368.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 367.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 367.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 366.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 366.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 366.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 366.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 366.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 365.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 364.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 363.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 363.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 362.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 362.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 362.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 362.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 360.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 360.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 360.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 360.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 360.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 359.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 358.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 357.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 357.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 357.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 357.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 355.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 355.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 354.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 354.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 353.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 353.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 353.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 352.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 351.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 351.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 350.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 349.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 348.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 347.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 347.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 346.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 345.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 344.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 344.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 344.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 344.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 343.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 343.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 343.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 340.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 339.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 337.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 336.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 336.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 336.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 335.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 335.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 334.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 334.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 334.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 333.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 333.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 333.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 332.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 331.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 331.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 331.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 331.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 331.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 330.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 329.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 328.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 328.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 327.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 326.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 325.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 325.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 324.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 324.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 323.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 322.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 320.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 319.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 318.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 318.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 318.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 317.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 317.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 315.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 314.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 314.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 314.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 313.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 311.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 310.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 310.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 307.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 307.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 306.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 306.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 304.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 304.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 303.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 302.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 302.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 301.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 300.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 300.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 299.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 297.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 295.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 293.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 291.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 288.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 288.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 288.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 285.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 281.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 281.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 276.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 275.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 272.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 269.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 265.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 259.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 259.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 254.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 253.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 249.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 238.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 104.6
Samples: 4

Max nTPM: 142.8
Min nTPM: 74.0
Sample A Female 142.8
Sample B Female 111.0
Sample C Male 90.4
Sample D Male 74.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

240.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 240.5
Samples: 4

Max nTPM: 264.8
Min nTPM: 212.9
Sample A Male 251.4
Sample B Male 264.8
Sample C Female 232.9
Sample D Female 212.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.4
74750021 Antisense, RP_060220_05_E11, Mouse strain C57BL/6J (56 days, male) 4.0
70439183 Antisense, RP_050614_03_D02, Mouse strain C57BL/6J (56 days, male) 2.9

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