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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:35.1 nTPM
GTEx:35.1 nTPM
FANTOM5:157.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA052625Antibody CAB004300Antibody CAB004674
Squamous epithelial cells MediumMediumMedium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 35.1
Samples: 156

Max nTPM: 65.1
Min nTPM: 16.1
Std nTPM: 8.3
Median nTPM: 34.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 65.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 58.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 53.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 52.1
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 51.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 51.0
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 50.9
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 50.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 49.9
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 49.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 48.1
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 47.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 47.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 46.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 46.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 46.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 45.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 45.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 45.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 44.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 44.6
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 44.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 44.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 44.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 43.7
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 43.6
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 43.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 43.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 43.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 43.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 42.9
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 42.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 42.3
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 42.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 42.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 41.8
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 41.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 41.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 41.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 41.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 40.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 40.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 39.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 39.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 38.9
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 38.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 38.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 38.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 38.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 38.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 37.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 37.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 37.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 37.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 37.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 36.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 36.9
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 36.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 36.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 36.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 36.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 36.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 35.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 35.8
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 35.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 35.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 35.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 35.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 35.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 34.9
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 34.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 34.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 34.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 34.4
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 34.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 34.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 34.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 34.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 34.0
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 33.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 33.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 33.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 33.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 33.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 33.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 33.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 32.8
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 32.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 32.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 32.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 32.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 32.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 32.2
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 32.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 31.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 31.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 31.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 31.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 31.5
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 31.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 31.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 31.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 31.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 31.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 31.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 31.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 31.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 31.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 30.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 30.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 30.6
GTEX-11I78-2026-SM-5987C 50-59 years, female 30.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 30.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 30.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 30.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 30.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 30.0
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 29.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 29.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 29.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 29.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 29.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 29.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 29.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 29.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 28.7
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 28.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 28.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 27.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 27.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 27.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 27.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 26.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 26.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 26.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 26.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 26.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 26.3
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 26.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 25.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 25.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 24.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 24.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 23.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 23.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 23.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 22.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 21.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 21.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 21.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 21.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 20.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 19.7
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 18.9
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 17.4
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 16.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

157.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 157.8
FF:10204-103F6 68 years, female 157.8

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