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  • TISSUE

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  • PSMB6
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:98.0 nTPM
HPA Brain:70.2 nTPM
GTEx:98.0 nTPM
Pig:91.8 nTPM
Mouse:289.2 nTPM
Allen mouse:4.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 60.9
2226 Male, age 75, left hemisphere 71.3
1961 Female, age 42, unknown 50.5
Dorsomedial nucleus
nTPM: 51.4
2041 Female, age 72, unknown 56.6
1989 Male, age 62, unknown 53.5
2017 Female, age 42, unknown 44.1
Lateral hypothalamic area
nTPM: 70.2
1791 Male, age 80, right hemisphere 89.6
2271 Male, age 75, both hemispheres 75.4
2228 Male, age 66, unknown 64.0
2412 Male, age 62, unknown 51.9
Mammillary body
nTPM: 66.4
1923 Female, age 72, unknown 88.1
2413 Male, age 66, unknown 67.9
1948 Female, age 72, unknown 64.9
1945 Male, age 80, right hemisphere 59.7
1834 Female, age 42, unknown 51.3
Paraventricular nucleus
nTPM: 55.4
2700 Male, age 62, unknown 55.4
Preoptic area
nTPM: 55.8
1907 Male, age 80, right hemisphere 62.8
1861 Female, age 42, unknown 53.4
2414 Female, age 72, unknown 51.1
Supraoptic nucleus
nTPM: 66.1
1894 Female, age 72, unknown 70.1
2043 Male, age 62, unknown 65.5
2835 Female, age 72, unknown 62.8
Ventromedial nucleus
nTPM: 56.9
1982 Female, age 72, unknown 66.7
1822 Female, age 42, unknown 47.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 98.0
Samples: 257

Max nTPM: 179.7
Min nTPM: 53.1
Std nTPM: 20.3
Median nTPM: 96.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 179.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 154.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 154.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 149.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 146.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 145.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 142.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 140.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 139.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 138.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 138.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 137.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 136.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 132.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 131.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 130.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 129.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 129.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 129.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 128.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 128.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 126.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 125.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 125.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 124.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 124.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 124.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 124.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 124.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 124.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 122.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 122.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 121.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 120.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 120.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 120.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 119.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 118.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 118.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 117.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 117.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 117.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 117.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 116.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 116.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 116.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 116.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 115.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 114.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 114.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 113.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 113.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 112.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 112.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 112.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 112.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 112.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 112.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 111.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 111.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 111.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 111.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 111.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 110.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 110.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 110.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 110.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 110.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 109.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 109.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 108.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 108.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 108.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 108.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 108.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 107.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 107.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 107.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 107.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 107.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 106.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 106.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 105.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 105.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 105.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 105.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 105.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 104.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 104.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 104.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 104.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 103.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 103.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 103.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 103.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 103.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 102.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 102.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 102.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 102.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 102.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 101.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 101.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 100.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 99.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 99.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 99.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 99.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 99.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 99.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 98.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 98.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 98.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 98.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 98.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 98.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 98.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 98.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 97.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 97.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 97.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 97.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 97.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 97.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 97.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 97.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 96.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 96.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 96.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 96.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 95.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 95.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 95.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 95.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 95.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 95.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 95.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 95.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 95.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 95.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 94.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 94.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 94.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 94.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 94.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 94.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 93.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 93.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 93.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 93.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 93.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 93.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 93.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 92.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 92.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 92.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 91.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 91.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 91.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 91.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 90.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 90.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 90.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 90.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 90.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 90.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 90.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 89.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 89.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 89.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 89.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 88.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 88.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 88.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 88.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 87.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 87.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 86.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 86.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 86.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 86.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 86.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 86.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 86.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 85.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 85.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 85.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 85.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 85.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 84.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 84.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 84.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 84.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 84.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 83.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 83.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 82.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 81.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 81.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 81.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 81.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 80.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 80.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 79.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 79.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 78.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 78.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 78.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 78.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 77.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 77.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 77.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 77.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 77.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 77.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 77.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 76.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 76.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 76.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 75.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 75.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 74.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 74.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 74.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 74.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 73.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 73.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 73.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 72.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 72.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 72.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 72.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 72.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 72.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 72.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 72.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 71.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 71.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 70.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 70.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 70.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 69.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 69.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 68.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 68.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 68.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 67.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 67.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 66.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 66.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 66.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 65.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 64.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 63.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 57.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 55.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 53.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 91.8
Samples: 4

Max nTPM: 114.3
Min nTPM: 72.7
Sample A Female 114.3
Sample B Female 93.8
Sample C Male 86.3
Sample D Male 72.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

289.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 289.3
Samples: 4

Max nTPM: 335.3
Min nTPM: 269.1
Sample A Male 275.8
Sample B Male 335.3
Sample C Female 269.1
Sample D Female 276.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.8
69080020 Antisense, RP_050324_01_D10, Mouse strain C57BL/6J (56 days, male) 4.8

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