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SH3BGRL3
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  • SH3BGRL3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:253.7 nTPM
HPA Brain:218.0 nTPM
GTEx:253.7 nTPM
Pig:312.3 nTPM
Mouse:161.1 nTPM
Allen mouse:2.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

218.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 132.2
2226 Male, age 75, left hemisphere 168.2
1961 Female, age 42, unknown 96.2
Dorsomedial nucleus
nTPM: 120.5
1989 Male, age 62, unknown 159.7
2041 Female, age 72, unknown 111.3
2017 Female, age 42, unknown 90.5
Lateral hypothalamic area
nTPM: 218.0
2271 Male, age 75, both hemispheres 265.1
2228 Male, age 66, unknown 207.6
1791 Male, age 80, right hemisphere 206.6
2412 Male, age 62, unknown 192.6
Mammillary body
nTPM: 151.7
2413 Male, age 66, unknown 189.5
1945 Male, age 80, right hemisphere 152.9
1948 Female, age 72, unknown 146.1
1923 Female, age 72, unknown 145.2
1834 Female, age 42, unknown 124.9
Paraventricular nucleus
nTPM: 146.5
2700 Male, age 62, unknown 146.5
Preoptic area
nTPM: 131.0
2414 Female, age 72, unknown 152.8
1861 Female, age 42, unknown 128.0
1907 Male, age 80, right hemisphere 112.2
Supraoptic nucleus
nTPM: 209.2
2835 Female, age 72, unknown 288.1
2043 Male, age 62, unknown 175.6
1894 Female, age 72, unknown 163.9
Ventromedial nucleus
nTPM: 96.6
1982 Female, age 72, unknown 107.0
1822 Female, age 42, unknown 86.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

253.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 253.7
Samples: 257

Max nTPM: 588.8
Min nTPM: 91.2
Std nTPM: 76.7
Median nTPM: 235.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 588.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 578.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 472.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 462.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 456.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 448.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 433.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 424.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 417.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 405.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 399.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 398.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 394.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 390.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 389.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 388.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 384.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 383.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 383.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 381.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 378.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 377.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 372.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 367.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 363.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 363.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 361.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 358.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 358.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 357.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 350.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 349.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 348.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 346.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 341.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 340.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 337.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 337.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 336.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 328.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 328.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 326.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 323.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 322.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 322.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 319.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 319.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 316.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 315.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 315.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 313.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 307.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 306.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 306.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 303.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 300.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 299.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 299.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 298.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 297.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 297.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 293.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 292.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 292.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 291.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 290.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 289.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 289.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 288.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 288.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 288.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 286.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 284.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 283.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 283.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 283.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 282.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 282.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 278.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 277.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 277.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 277.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 272.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 272.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 272.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 271.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 268.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 267.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 265.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 264.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 264.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 262.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 262.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 262.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 262.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 262.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 260.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 259.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 259.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 257.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 256.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 255.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 255.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 255.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 255.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 254.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 254.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 254.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 253.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 253.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 253.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 252.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 252.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 252.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 250.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 250.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 248.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 245.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 245.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 244.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 244.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 239.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 238.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 238.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 238.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 237.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 237.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 236.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 235.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 233.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 232.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 231.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 230.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 230.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 229.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 229.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 229.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 228.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 228.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 227.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 227.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 227.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 227.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 227.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 225.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 225.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 224.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 224.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 224.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 224.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 223.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 222.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 221.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 220.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 220.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 219.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 219.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 219.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 218.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 218.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 217.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 216.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 216.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 216.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 215.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 214.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 214.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 213.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 212.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 212.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 212.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 211.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 210.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 210.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 210.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 210.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 209.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 207.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 207.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 206.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 206.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 206.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 206.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 205.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 204.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 204.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 204.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 203.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 203.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 203.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 203.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 201.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 201.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 200.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 200.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 199.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 199.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 199.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 198.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 197.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 197.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 195.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 194.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 194.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 194.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 192.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 191.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 191.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 191.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 191.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 190.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 188.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 188.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 187.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 187.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 187.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 187.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 186.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 185.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 185.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 185.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 182.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 182.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 180.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 179.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 179.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 178.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 176.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 175.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 175.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 173.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 172.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 172.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 171.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 168.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 168.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 167.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 166.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 161.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 160.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 160.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 159.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 159.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 157.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 157.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 156.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 152.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 150.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 150.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 148.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 147.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 145.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 142.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 138.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 131.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 118.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 91.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

312.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 312.3
Samples: 4

Max nTPM: 414.1
Min nTPM: 204.7
Sample A Female 414.1
Sample B Female 324.5
Sample C Male 305.8
Sample D Male 204.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 161.1
Samples: 4

Max nTPM: 171.8
Min nTPM: 146.9
Sample A Male 146.9
Sample B Male 171.8
Sample C Female 169.6
Sample D Female 156.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.9
69873708 Antisense, RP_050512_01_G10, Mouse strain C57BL/6J (56 days, male) 2.9

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