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  • SUMMARY

  • TISSUE

  • BRAIN

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  • ANK2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

147.327
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:16.1 nTPM
HPA Brain:292.2 nTPM
GTEx:16.1 nTPM
Pig:140.9 nTPM
Mouse:140.3 nTPM
Allen mouse:18.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB015178
Hypothalamus mean intensity 147.327
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 107.494
Mammillary nucleus 71.630
Periventricular hypothalamic nucleus 147.327
Supraoptic nucleus 117.744
Tuberal nucleus 90.503
Ventral tuberomammillary nucleus 96.608
Lateral preoptic area 45.544
Medial preoptic area 79.832
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus 75.490
Anterior hypothalamic area, central -
Ventral medial hypothalamic nucleus 39.503
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 145.481
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 72.208
Dorsal medial hypothalamic nucleus 52.505
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

292.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 250.8
2226 Male, age 75, left hemisphere 291.3
1961 Female, age 42, unknown 210.3
Dorsomedial nucleus
nTPM: 231.5
1989 Male, age 62, unknown 301.0
2041 Female, age 72, unknown 208.2
2017 Female, age 42, unknown 185.3
Lateral hypothalamic area
nTPM: 292.2
2271 Male, age 75, both hemispheres 336.3
1791 Male, age 80, right hemisphere 305.5
2228 Male, age 66, unknown 300.3
2412 Male, age 62, unknown 226.8
Mammillary body
nTPM: 251.0
1923 Female, age 72, unknown 327.9
2413 Male, age 66, unknown 252.0
1948 Female, age 72, unknown 241.0
1945 Male, age 80, right hemisphere 233.0
1834 Female, age 42, unknown 201.0
Paraventricular nucleus
nTPM: 224.8
2700 Male, age 62, unknown 224.8
Preoptic area
nTPM: 240.6
1907 Male, age 80, right hemisphere 281.7
2414 Female, age 72, unknown 226.3
1861 Female, age 42, unknown 213.9
Supraoptic nucleus
nTPM: 235.7
1894 Female, age 72, unknown 278.4
2043 Male, age 62, unknown 216.4
2835 Female, age 72, unknown 212.4
Ventromedial nucleus
nTPM: 270.8
1982 Female, age 72, unknown 304.4
1822 Female, age 42, unknown 237.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 16.1
Samples: 257

Max nTPM: 54.6
Min nTPM: 0.9
Std nTPM: 10.4
Median nTPM: 14.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 54.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 52.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 46.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 46.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 45.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 44.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 43.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 42.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 42.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 40.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 39.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 39.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 35.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 35.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 35.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 34.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 33.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 32.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 31.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 31.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 29.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 29.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 28.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 28.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 28.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 28.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 28.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 28.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 28.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 27.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 27.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 27.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 27.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 26.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 26.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 26.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 26.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 26.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 25.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 25.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 25.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 25.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 25.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 25.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 24.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 24.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 24.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 24.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 24.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 24.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 24.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 23.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 23.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 23.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 23.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 23.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 23.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 23.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 23.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 23.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 23.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 22.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 22.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 22.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 22.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 22.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 22.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 22.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 22.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 22.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 22.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 21.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 21.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 21.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 21.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 21.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 21.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 21.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 20.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 20.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 20.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 20.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 20.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 19.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 19.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 19.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 19.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 19.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 19.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 19.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 19.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 18.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 18.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 18.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 18.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 18.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 18.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 18.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 18.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 18.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 18.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 17.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 17.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 17.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 17.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 17.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 17.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 17.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 17.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 17.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 17.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 17.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 17.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 16.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 16.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 16.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 16.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 15.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 15.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 15.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 15.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 15.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 15.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 15.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 15.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 15.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 15.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 14.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 14.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 14.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 14.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 14.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 14.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 13.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 13.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 13.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 13.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 13.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 13.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 13.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 13.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 13.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 13.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 12.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 12.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 12.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 12.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 12.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 12.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 12.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 12.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 11.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 11.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 11.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 11.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 11.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 11.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 11.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 11.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 11.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 11.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 11.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 10.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 10.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 10.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 10.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 10.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 10.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 10.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 10.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 10.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 10.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 10.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 10.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 10.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 10.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 9.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 9.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 9.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 9.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 9.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 8.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 8.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 8.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 8.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 8.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 7.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 7.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 7.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 7.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 7.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 7.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 7.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 6.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 6.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 6.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 6.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 6.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 6.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 6.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 6.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 6.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 6.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 6.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 6.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 6.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 6.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 5.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 5.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 5.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 5.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 5.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 5.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 5.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 5.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 5.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 5.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 5.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 5.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 5.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 5.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 5.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 4.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 4.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 4.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 4.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 4.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 4.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 4.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 4.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 4.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 4.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 4.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 3.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 3.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 3.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 3.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 3.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 3.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 3.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 3.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 3.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 3.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 3.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 3.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 2.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 2.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 2.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 2.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 2.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 1.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 0.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 140.9
Samples: 4

Max nTPM: 171.5
Min nTPM: 119.4
Sample A Female 171.5
Sample B Female 145.1
Sample C Male 127.6
Sample D Male 119.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 140.4
Samples: 4

Max nTPM: 164.6
Min nTPM: 121.9
Sample A Male 135.3
Sample B Male 121.9
Sample C Female 139.6
Sample D Female 164.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.4
68844707 Antisense, RP_050222_02_C04, Mouse strain C57BL/6J (56 days, male) 19.5
71924087 Antisense, RP_051017_02_H10, Mouse strain C57BL/6J (56 days, male) 17.3

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