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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
90.6
nTPM
HPA Brain:
58.7
nTPM
GTEx:
90.6
nTPM
FANTOM5:
35.4
Scaled Tags Per Million
Pig:
24.0
nTPM
Mouse:
3.1
nTPM
Allen mouse:
0.0
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
58.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 57.2
2586
Male, age 75, left hemisphere
106.1
2019
Male, age 18, unknown
60.1
2828
Female, age 72, unknown
58.9
1827
Male, age 72, unknown
57.7
1870
Female, age 42, unknown
53.0
2411
Female, age 72, unknown
50.5
1830
Male, age 51, unknown
49.0
1833
Male, age 53, unknown
48.9
2666
Male, age 74, left hemisphere
47.6
2219
Male, age 76, both hemispheres
40.2
Dorsal raphe nucleus nTPM: 48.2
2016
Female, age 72, unknown
50.6
1828
Male, age 53, unknown
50.1
2047
Male, age 72, unknown
48.9
2298
Female, age 72, unknown
46.9
2750
Male, age 76, both hemispheres
44.5
Inferior colliculus nTPM: 53.4
2849
Male, age 72, unknown
61.7
1848
Female, age 42, unknown
54.3
1890
Male, age 53, unknown
54.2
2097
Female, age 72, unknown
43.5
Median raphe nucleus nTPM: 46.3
2220
Male, age 76, midline
46.3
Periaquaductal grey, anterior nTPM: 57.9
2502
Female, age 75, unknown
65.0
1795
Male, age 51, unknown
60.5
1947
Male, age 18, unknown
48.3
Periaquaductal grey, dorsal nTPM: 56.2
1840
Male, age 53, unknown
64.6
1831
Male, age 72, unknown
56.9
2850
Male, age 76, both hemispheres
52.0
2464
Female, age 72, unknown
51.4
Periaquaductal grey, lateral nTPM: 48.7
2140
Male, age 76, both hemispheres
55.4
2053
Male, age 18, unknown
51.8
2272
Male, age 74, both hemispheres
38.8
Pretectal area nTPM: 53.8
2007
Male, age 72, unknown
68.0
1816
Male, age 51, unknown
63.8
2407
Male, age 75, both hemispheres
57.8
1817
Female, age 42, unknown
57.5
2825
Male, age 18, unknown
54.2
2316
Male, age 76, right hemisphere
53.7
1815
Male, age 53, unknown
53.1
1944
Female, age 72, unknown
51.9
2667
Female, age 75, unknown
44.2
2224
Female, age 72, unknown
43.8
2273
Male, age 74, both hemispheres
43.1
Red nucleus nTPM: 57.0
2584
Male, age 75, left hemisphere
72.5
2588
Male, age 74, left hemisphere
65.0
2503
Female, age 72, unknown
58.4
2785
Male, age 18, unknown
58.1
2769
Male, age 72, unknown
57.4
2227
Male, age 72, unknown
57.1
1904
Male, age 53, unknown
55.7
2823
Male, age 76, right hemisphere
54.4
1954
Female, age 42, unknown
53.3
2725
Female, age 75, unknown
51.5
1865
Male, age 51, unknown
51.3
1821
Female, age 72, unknown
49.6
Substantia nigra nTPM: 51.1
2583
Male, age 75, right hemisphere
66.3
2590
Female, age 75, unknown
60.5
2665
Male, age 74, both hemispheres
59.9
1889
Female, age 72, unknown
51.4
1916
Female, age 42, unknown
49.0
2699
Male, age 18, unknown
48.1
2409
Female, age 72, unknown
47.6
1851
Male, age 51, unknown
47.5
1941
Male, age 53, unknown
46.7
2241
Male, age 72, unknown
34.0
Superior colliculus nTPM: 58.7
2664
Male, age 75, both hemispheres
102.5
1796
Male, age 53, unknown
60.0
1839
Male, age 51, unknown
58.4
2261
Male, age 18, unknown
58.4
2668
Female, age 75, unknown
55.8
2087
Female, age 72, unknown
53.7
1995
Male, age 72, unknown
51.8
1913
Female, age 42, unknown
50.6
2587
Male, age 74, left hemisphere
47.9
1895
Male, age 76, right hemisphere
47.5
Ventral tegmental area nTPM: 48.6
1915
Female, age 42, unknown
55.5
2223
Female, age 72, unknown
50.3
1942
Male, age 51, unknown
49.6
2021
Male, age 53, unknown
46.9
2410
Female, age 72, unknown
46.0
2218
Male, age 76, both hemispheres
43.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
90.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 90.6
Samples: 139
Max nTPM: 304.4
Min nTPM: 32.4
Std nTPM: 40.7
Median nTPM: 81.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
304.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
247.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
205.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
197.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
186.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
177.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
177.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
169.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
158.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
157.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
151.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
146.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
141.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
140.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
137.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
131.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
130.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
129.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
129.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
127.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
124.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
124.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
123.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
121.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
117.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
116.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
113.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
112.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
112.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
111.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
111.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
111.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
108.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
108.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
107.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
106.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
106.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
106.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
103.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
100.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
98.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
98.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
97.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
95.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
94.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
93.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
93.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
91.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
91.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
90.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
90.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
90.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
90.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
89.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
89.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
88.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
87.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
87.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
86.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
86.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
85.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
84.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
84.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
84.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
84.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
84.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
83.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
82.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
81.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
81.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
81.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
79.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
78.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
78.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
78.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
77.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
77.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
77.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
76.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
76.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
75.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
75.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
74.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
73.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
73.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
73.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
73.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
72.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
72.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
72.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
71.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
71.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
71.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
71.0
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
71.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
68.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
68.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
68.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
68.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
66.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
66.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
65.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
65.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
65.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
65.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
64.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
64.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
63.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
63.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
63.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
61.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
61.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
59.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
58.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
57.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
57.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
56.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
55.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
54.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
53.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
53.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
53.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
53.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
52.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
52.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
51.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
51.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
50.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
50.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
48.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
47.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
45.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
45.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
42.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
41.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
40.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
39.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
38.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
32.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
3.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 3.2
Samples: 4
Max nTPM: 4.3
Min nTPM: 2.3
Sample A
Male
4.3
Sample B
Male
3.2
Sample C
Female
2.3
Sample D
Female
2.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.