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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
284.2
nTPM
Monaco:
530.0
nTPM
Schmiedel:
303.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
284.2
HPA sample
nTPM
gdT-cell nTPM: 121.9
Samples: 6
Max nTPM: 134.1
Min nTPM: 106.8
P10809_1007
134.1
P10809_1022
127.6
P10809_1041
106.8
P10809_1060
110.7
P10809_1077
119.5
P10809_1098
132.4
MAIT T-cell nTPM: 200.9
Samples: 6
Max nTPM: 253.8
Min nTPM: 126.5
P10809_1006
253.8
P10809_1024
232.1
P10809_1043
126.5
P10809_1062
198.6
P10809_1083
167.1
P10809_1097
227.3
Memory CD4 T-cell nTPM: 223.0
Samples: 6
Max nTPM: 293.2
Min nTPM: 180.7
P10809_1014
293.2
P10809_1026
221.1
P10809_1045
207.1
P10809_1064
210.2
P10809_1086
180.7
P10809_1113
225.6
Memory CD8 T-cell nTPM: 179.6
Samples: 5
Max nTPM: 231.4
Min nTPM: 133.2
P10809_1012
231.4
P10809_1027
173.8
P10809_1046
133.2
P10809_1065
168.4
P10809_1111
191.1
Naive CD4 T-cell nTPM: 284.2
Samples: 6
Max nTPM: 434.8
Min nTPM: 225.3
P10809_1015
434.8
P10809_1030
242.9
P10809_1049
225.3
P10809_1068
297.9
P10809_1085
240.2
P10809_1112
264.2
Naive CD8 T-cell nTPM: 241.5
Samples: 6
Max nTPM: 371.4
Min nTPM: 161.6
P10809_1016
371.4
P10809_1031
262.9
P10809_1050
179.5
P10809_1069
204.1
P10809_1087
161.6
P10809_1110
269.5
T-reg nTPM: 266.1
Samples: 6
Max nTPM: 305.8
Min nTPM: 167.1
P10809_1018
302.0
P10809_1037
305.8
P10809_1056
167.1
P10809_1075
274.1
P10809_1094
269.1
P10809_1106
278.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
530.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 374.7
Samples: 4
Max nTPM: 472.5
Min nTPM: 223.3
RHH5202_R3573
472.5
RHH5230_R3602
350.1
RHH5259_R3631
223.3
RHH5288_R3660
452.8
Effector memory CD8 T-cell nTPM: 318.4
Samples: 4
Max nTPM: 416.6
Min nTPM: 200.1
RHH5203_R3574
416.6
RHH5231_R3603
306.6
RHH5260_R3632
200.1
RHH5289_R3661
350.3
MAIT T-cell nTPM: 364.8
Samples: 4
Max nTPM: 466.1
Min nTPM: 244.3
RHH5233_R3605
433.6
RHH5205_R3576
244.3
RHH5262_R3634
315.3
RHH5297_R3663
466.1
Memory CD4 T-cell TFH nTPM: 438.4
Samples: 4
Max nTPM: 488.7
Min nTPM: 419.8
RHH5300_R3666
423.2
RHH5236_R3608
421.7
RHH5265_R3637
419.8
RHH5208_R3579
488.7
Memory CD4 T-cell Th1 nTPM: 385.4
Samples: 4
Max nTPM: 538.4
Min nTPM: 231.1
RHH5210_R3581
471.3
RHH5302_R3668
538.4
RHH5238_R3610
231.1
RHH5267_R3639
300.8
Memory CD4 T-cell Th1/Th17 nTPM: 357.3
Samples: 4
Max nTPM: 503.7
Min nTPM: 203.5
RHH5303_R3669
503.7
RHH5211_R3582
419.9
RHH5239_R3611
203.5
RHH5268_R3640
301.9
Memory CD4 T-cell Th17 nTPM: 342.3
Samples: 4
Max nTPM: 464.1
Min nTPM: 255.5
RHH5304_R3670
385.1
RHH5212_R3583
464.1
RHH5240_R3612
264.5
RHH5269_R3641
255.5
Memory CD4 T-cell Th2 nTPM: 469.6
Samples: 4
Max nTPM: 635.3
Min nTPM: 355.7
RHH5305_R3671
498.0
RHH5213_R3584
389.3
RHH5241_R3613
635.3
RHH5270_R3642
355.7
Naive CD4 T-cell nTPM: 523.5
Samples: 4
Max nTPM: 588.1
Min nTPM: 383.8
RHH5306_R3672
581.9
RHH5214_R3585
540.1
RHH5242_R3614
588.1
RHH5271_R3643
383.8
Naive CD8 T-cell nTPM: 530.0
Samples: 4
Max nTPM: 674.4
Min nTPM: 282.5
RHH5201_R3572
595.8
RHH5229_R3601
282.5
RHH5258_R3630
674.4
RHH5287_R3659
567.3
Non-Vd2 gdTCR nTPM: 265.0
Samples: 4
Max nTPM: 343.5
Min nTPM: 190.7
RHH5235_R3607
190.7
RHH5264_R3636
293.5
RHH5207_R3578
232.4
RHH5299_R3665
343.5
T-reg nTPM: 401.7
Samples: 4
Max nTPM: 546.5
Min nTPM: 283.8
RHH5301_R3667
546.5
RHH5237_R3609
464.1
RHH5266_R3638
283.8
RHH5209_R3580
312.4
Terminal effector memory CD4 T-cell nTPM: 274.9
Samples: 2
Max nTPM: 374.5
Min nTPM: 175.2
RHH5243_R3615
175.2
RHH5272_R3644
374.5
Terminal effector memory CD8 T-cell nTPM: 280.0
Samples: 4
Max nTPM: 321.3
Min nTPM: 181.5
RHH5232_R3604
321.3
RHH5204_R3575
297.1
RHH5261_R3633
181.5
RHH5296_R3662
320.1
Vd2 gdTCR nTPM: 330.8
Samples: 4
Max nTPM: 377.3
Min nTPM: 225.6
RHH5234_R3606
370.6
RHH5206_R3577
349.7
RHH5263_R3635
225.6
RHH5298_R3664
377.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.