HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:14.3 nTPM
HPA Brain:17.1 nTPM
GTEx:14.3 nTPM
FANTOM5:90.1 Scaled Tags Per Million
Pig:70.8 nTPM
Mouse:67.1 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001032Antibody HPA027214Antibody CAB037024
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 16.5
2529 Female, age 94, left hemisphere 19.8
1898 Male, age 80, left hemisphere 17.3
2148 Female, age 91, left hemisphere 16.9
2621 Female, age 67, right hemisphere 16.8
1911 Female, age 85, right hemisphere 16.3
1855 Male, age 76, left hemisphere 11.6
Dentate gyrus
nTPM: 17.1
2530 Female, age 94, left hemisphere 18.8
2246 Female, age 85, both hemispheres 18.5
2531 Female, age 67, both hemispheres 18.4
2010 Male, age 76, both hemispheres 16.7
1927 Female, age 91, both hemispheres 15.2
2528 Male, age 74, both hemispheres 15.0
Entorhinal gyrus
nTPM: 15.5
1938 Female, age 85, left hemisphere 17.2
2686 Male, age 75, right hemisphere 17.0
2117 Female, age 91, right hemisphere 16.8
1787 Male, age 76, left hemisphere 15.4
2764 Male, age 80, right hemisphere 15.3
2613 Female, age 94, left hemisphere 11.7
Hippocampus, CA1
nTPM: 15.5
2045 Male, age 76, both hemispheres 17.3
1873 Female, age 85, both hemispheres 17.1
2527 Male, age 74, both hemispheres 15.8
2082 Female, age 91, right hemisphere 14.7
2749 Male, age 80, left hemisphere 12.7
Hippocampus, CA2
nTPM: 16.1
1940 Female, age 85, left hemisphere 19.8
2249 Male, age 74, both hemispheres 17.0
1892 Male, age 76, both hemispheres 16.7
2437 Female, age 94, left hemisphere 15.6
2113 Female, age 91, right hemisphere 13.8
1963 Male, age 80, left hemisphere 13.6
Hippocampus, CA3
nTPM: 16.7
1891 Female, age 85, both hemispheres 18.4
2436 Male, age 74, both hemispheres 18.2
2861 Female, age 67, both hemispheres 18.1
1867 Male, age 76, both hemispheres 16.8
2137 Male, age 80, left hemisphere 15.4
2620 Female, age 94, left hemisphere 13.2
Parahippocampal cortex
nTPM: 16.1
2245 Female, age 91, both hemispheres 18.8
2693 Female, age 94, both hemispheres 18.0
1933 Female, age 85, both hemispheres 17.9
1850 Male, age 80, both hemispheres 16.3
1990 Female, age 91, right hemisphere 16.3
2532 Female, age 72, left hemisphere 15.6
2018 Male, age 76, both hemispheres 15.3
2692 Male, age 74, both hemispheres 15.0
2250 Female, age 67, right hemisphere 14.9
2622 Female, age 67, right hemisphere 13.2
Perirhinal gyrus
nTPM: 16.7
2848 Male, age 76, right hemisphere 17.8
1841 Female, age 85, right hemisphere 17.4
1794 Male, age 80, right hemisphere 16.2
1847 Female, age 91, left hemisphere 16.2
2521 Female, age 94, right hemisphere 15.8
Subiculum
nTPM: 15.5
1977 Female, age 85, both hemispheres 17.3
1901 Male, age 80, both hemispheres 16.3
2042 Male, age 76, both hemispheres 16.2
2729 Female, age 91, right hemisphere 15.5
2438 Female, age 94, left hemisphere 14.0
2619 Male, age 74, both hemispheres 13.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.3
Samples: 197

Max nTPM: 31.1
Min nTPM: 7.2
Std nTPM: 4.0
Median nTPM: 13.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 31.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 25.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 24.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 23.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 23.5
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 22.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 22.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 22.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 21.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 21.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 90.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.1
FF:10153-102I9 76 years, female 101.3
FF:10169-103B7 60 years, female 78.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 70.8
Pig sample Sample description nTPM
Subiculum
nTPM: 70.7
Samples: 4

Max nTPM: 83.3
Min nTPM: 64.2
Sample A Female 83.3
Sample B Female 64.2
Sample C Male 66.7
Sample D Male 68.7
Dorsal hippocampus
nTPM: 59.6
Samples: 4

Max nTPM: 66.4
Min nTPM: 53.3
Sample A Female 66.4
Sample B Female 62.2
Sample C Male 56.6
Sample D Male 53.3
Entorhinal cortex
nTPM: 58.6
Samples: 4

Max nTPM: 61.8
Min nTPM: 52.4
Sample A Female 61.8
Sample B Female 60.7
Sample C Male 59.5
Sample D Male 52.4
Ventral hippocampus
nTPM: 67.9
Samples: 4

Max nTPM: 85.0
Min nTPM: 58.8
Sample A Female 85.0
Sample B Female 62.3
Sample C Male 65.5
Sample D Male 58.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 67.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.1
Samples: 4

Max nTPM: 73.1
Min nTPM: 64.2
Sample A Male 64.2
Sample B Male 65.2
Sample C Female 65.9
Sample D Female 73.1
Hippocampal formation
nTPM: 66.0
Samples: 4

Max nTPM: 71.0
Min nTPM: 61.7
Sample A Male 65.6
Sample B Male 71.0
Sample C Female 65.5
Sample D Female 61.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
70546335 Antisense, RP_050623_04_B01, Mouse strain C57BL/6J (56 days, male) 15.0
73931413 Antisense, RP_051214_04_E05, Mouse strain C57BL/6J (56 days, male) 10.4

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