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UCHL1
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • UCHL1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

123.901
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1037.7 nTPM
HPA Brain:1773.9 nTPM
GTEx:1037.7 nTPM
Pig:678.2 nTPM
Mouse:424.7 nTPM
Allen mouse:24.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB079024
Hypothalamus mean intensity 123.901
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 105.199
Mammillary nucleus 60.818
Periventricular hypothalamic nucleus 118.857
Supraoptic nucleus 122.724
Tuberal nucleus 67.103
Ventral tuberomammillary nucleus -
Lateral preoptic area 55.331
Medial preoptic area 74.825
Suprachiasmatic nucleus 123.901
Paraventricular hypothalamic nucleus 84.249
Anterior hypothalamic area, central 71.000
Ventral medial hypothalamic nucleus 60.679
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 54.753
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 67.711
Dorsal medial hypothalamic nucleus 81.963
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1773.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 1165.1
2226 Male, age 75, left hemisphere 1894.3
1961 Female, age 42, unknown 435.8
Dorsomedial nucleus
nTPM: 439.0
1989 Male, age 62, unknown 577.2
2041 Female, age 72, unknown 435.9
2017 Female, age 42, unknown 304.0
Lateral hypothalamic area
nTPM: 1773.9
2271 Male, age 75, both hemispheres 3734.7
2228 Male, age 66, unknown 1507.7
1791 Male, age 80, right hemisphere 1267.0
2412 Male, age 62, unknown 586.4
Mammillary body
nTPM: 516.9
1923 Female, age 72, unknown 791.9
2413 Male, age 66, unknown 693.6
1945 Male, age 80, right hemisphere 428.8
1948 Female, age 72, unknown 390.6
1834 Female, age 42, unknown 279.9
Paraventricular nucleus
nTPM: 367.6
2700 Male, age 62, unknown 367.6
Preoptic area
nTPM: 526.3
1907 Male, age 80, right hemisphere 681.3
2414 Female, age 72, unknown 541.1
1861 Female, age 42, unknown 356.5
Supraoptic nucleus
nTPM: 456.5
2835 Female, age 72, unknown 579.1
1894 Female, age 72, unknown 433.7
2043 Male, age 62, unknown 356.7
Ventromedial nucleus
nTPM: 434.7
1982 Female, age 72, unknown 456.0
1822 Female, age 42, unknown 413.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1037.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1037.7
Samples: 257

Max nTPM: 3911.0
Min nTPM: 67.2
Std nTPM: 617.3
Median nTPM: 978.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 3911.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 3677.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 3450.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 2993.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 2877.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 2635.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 2411.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 2410.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 2343.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 2293.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 2253.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 2215.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 2179.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 2161.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 2109.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 2044.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 2000.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1977.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 1931.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 1921.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 1896.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 1850.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 1801.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 1720.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1720.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 1696.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 1689.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 1683.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 1660.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 1657.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 1640.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 1611.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 1594.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 1588.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 1586.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 1568.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 1559.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 1546.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1541.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 1538.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 1499.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 1491.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 1484.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 1481.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 1477.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1472.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 1461.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 1454.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 1447.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 1446.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 1421.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 1406.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 1406.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1397.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 1386.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1385.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 1385.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 1385.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1380.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 1375.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 1375.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 1372.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1351.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1347.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 1347.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 1342.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 1339.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1333.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 1328.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 1324.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 1321.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1319.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 1316.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1312.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 1311.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 1306.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 1299.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 1297.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1296.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 1295.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 1294.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 1279.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 1266.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 1250.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 1246.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 1243.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 1226.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1214.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 1214.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 1209.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 1204.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1197.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 1193.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 1186.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 1185.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 1182.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1178.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 1177.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 1175.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 1173.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1169.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 1166.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 1140.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 1134.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1129.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 1123.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 1118.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 1117.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 1116.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1110.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1102.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 1101.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 1101.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 1097.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 1092.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 1086.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 1075.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 1074.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1062.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 1027.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1024.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 1016.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1013.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 1011.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 1009.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 1006.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1001.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 991.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 978.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 968.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 963.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 948.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 945.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 945.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 939.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 926.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 926.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 919.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 917.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 905.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 900.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 893.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 888.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 882.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 882.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 860.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 851.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 848.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 844.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 841.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 838.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 832.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 830.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 820.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 814.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 810.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 808.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 799.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 795.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 793.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 785.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 777.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 777.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 775.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 769.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 768.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 763.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 763.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 754.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 734.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 731.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 724.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 720.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 707.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 705.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 692.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 690.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 689.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 679.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 674.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 674.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 671.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 660.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 648.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 636.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 636.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 617.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 617.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 617.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 617.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 606.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 600.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 600.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 598.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 597.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 588.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 587.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 553.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 542.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 536.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 533.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 533.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 526.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 525.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 523.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 513.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 505.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 492.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 488.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 482.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 481.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 476.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 475.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 474.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 458.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 457.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 440.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 435.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 414.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 413.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 377.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 353.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 351.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 347.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 337.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 328.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 325.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 318.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 316.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 312.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 295.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 295.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 291.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 276.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 270.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 269.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 268.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 267.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 265.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 265.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 249.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 248.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 247.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 244.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 233.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 232.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 223.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 222.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 192.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 187.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 186.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 167.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 166.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 131.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 126.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 106.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 67.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

678.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 678.2
Samples: 4

Max nTPM: 880.1
Min nTPM: 583.1
Sample A Female 880.1
Sample B Female 645.8
Sample C Male 583.1
Sample D Male 603.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

424.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 424.7
Samples: 4

Max nTPM: 574.1
Min nTPM: 289.1
Sample A Male 535.5
Sample B Male 574.1
Sample C Female 299.9
Sample D Female 289.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

24.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 24.5
79556674 Antisense, RP_071204_01_C07, Mouse strain C57BL/6J (56 days, male) 28.8
79632309 Antisense, RP_071204_01_C07, Mouse strain C57BL/6J (56 days, male) 22.4
1089 Antisense, RP_Baylor_253988, Mouse strain C57BL/6J (56 days, male) 20.1
1088 Antisense, RP_Baylor_253988, Mouse strain C57BL/6J (56 days, male) 17.4

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