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UCHL1
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  • SUMMARY

  • TISSUE

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  • UCHL1
TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
Tissue methods
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

90.180
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:491.2 nTPM
GTEx:562.3 nTPM
FANTOM5:845.6 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA005993Antibody CAB002580
Glial cells MediumNot detected
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB079024
Hippocampal formation mean intensity 90.180
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Polymorph layer of the dentate gyrus 64.863
Molecular layer of the dentate gyrus 55.265
Granular dentate gyrus 35.970
CA1 - oriens layer 49.595
CA1 - pyramidal layer 46.593
CA1 - radiatum layer 55.256
CA2 - oriens layer 71.373
CA2 - pyramidal layer 69.925
CA2 - radiatum layer 75.225
CA3 - oriens layer 90.180
CA3 - pyramidal layer 80.830
CA3 - radiatum layer 78.164
Stratum lucidum 69.347
Lacunosum moleculare 41.510
Subiculum 58.788

HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

491.2
Sample id Sample description nTPM
Hippocampus
nTPM: 491.2
1898 Male, age 80, left hemisphere 749.7
2621 Female, age 67, right hemisphere 683.6
2148 Female, age 91, left hemisphere 473.2
1855 Male, age 76, left hemisphere 413.1
1911 Female, age 85, right hemisphere 394.9
2529 Female, age 94, left hemisphere 232.8

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

562.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 562.3
Samples: 255

Max nTPM: 2065.8
Min nTPM: 65.5
Std nTPM: 389.0
Median nTPM: 475.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 2065.8
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 1769.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1642.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 1621.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 1598.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1586.8
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 1533.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 1507.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 1458.5
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 1431.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1428.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 1415.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 1407.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 1394.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 1380.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1259.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 1252.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1236.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 1232.1
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 1225.8
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 1174.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 1172.9
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 1145.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 1142.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 1126.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 1116.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 1115.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 1098.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1092.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 1083.0
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 1052.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 1052.2
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 1029.1
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 1011.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 1007.5
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 1007.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 1003.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 965.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 963.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 962.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 960.0
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 949.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 948.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 945.8
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 939.8
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 923.2
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 920.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 918.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 897.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 890.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 888.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 878.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 877.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 872.1
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 866.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 864.2
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 862.3
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 842.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 840.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 824.3
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 809.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 801.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 798.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 796.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 794.6
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 783.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 772.0
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 757.3
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 743.7
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 742.3
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 737.9
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 737.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 726.6
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 717.4
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 713.9
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 711.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 704.0
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 688.3
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 684.9
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 680.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 675.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 672.2
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 669.5
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 664.4
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 648.5
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 640.9
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 625.7
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 622.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 615.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 610.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 605.4
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 597.6
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 593.0
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 587.0
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 578.9
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 578.4
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 571.8
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 571.1
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 567.2
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 556.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 552.1
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 550.8
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 541.1
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 540.1
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 539.4
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 538.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 537.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 535.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 530.6
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 525.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 522.0
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 518.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 509.6
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 507.9
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 507.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 505.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 504.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 497.9
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 492.6
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 491.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 489.7
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 489.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 488.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 488.6
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 483.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 482.6
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 477.6
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 475.4
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 473.3
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 467.0
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 464.9
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 464.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 462.3
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 461.1
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 457.2
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 436.6
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 431.2
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 425.9
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 423.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 422.4
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 419.3
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 417.4
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 415.8
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 412.4
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 411.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 410.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 405.3
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 400.5
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 400.2
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 396.7
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 388.7
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 388.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 385.3
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 384.2
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 382.1
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 379.9
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 377.6
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 376.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 363.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 358.1
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 357.2
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 349.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 341.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 332.0
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 320.3
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 311.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 310.8
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 309.9
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 306.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 306.5
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 296.6
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 296.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 293.6
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 290.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 289.3
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 285.6
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 285.0
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 285.0
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 284.5
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 280.3
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 275.1
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 273.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 263.9
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 256.2
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 254.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 254.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 249.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 249.1
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 246.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 245.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 243.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 242.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 240.0
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 232.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 232.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 221.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 218.3
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 218.1
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 215.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 214.9
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 214.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 212.8
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 212.8
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 212.1
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 210.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 209.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 208.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 208.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 208.3
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 203.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 199.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 198.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 198.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 197.3
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 194.0
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 193.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 191.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 189.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 179.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 178.8
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 178.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 177.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 174.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 173.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 171.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 170.3
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 170.2
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 169.8
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 164.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 159.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 158.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 157.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 154.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 154.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 149.1
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 149.0
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 147.6
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 146.8
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 145.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 143.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 137.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 136.3
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 136.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 133.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 130.2
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 122.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 118.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 116.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 115.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 113.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 113.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 111.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 105.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 98.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 65.5
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HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

845.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 845.6
FF:10169-103B7 60 years, female 1329.3
FF:10153-102I9 76 years, female 361.9

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