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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
496.4
nTPM
HPA Brain:
198.8
nTPM
GTEx:
496.4
nTPM
FANTOM5:
618.6
Scaled Tags Per Million
Pig:
110.0
nTPM
Mouse:
863.2
nTPM
Allen mouse:
6.4
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
198.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 133.3
2828
Female, age 72, unknown
196.6
1870
Female, age 42, unknown
174.9
2666
Male, age 74, left hemisphere
129.9
1827
Male, age 72, unknown
129.4
1833
Male, age 53, unknown
128.2
1830
Male, age 51, unknown
122.4
2219
Male, age 76, both hemispheres
122.2
2019
Male, age 18, unknown
119.1
2411
Female, age 72, unknown
118.2
2586
Male, age 75, left hemisphere
91.9
Dorsal raphe nucleus nTPM: 162.5
2016
Female, age 72, unknown
185.0
2298
Female, age 72, unknown
178.4
2047
Male, age 72, unknown
154.3
2750
Male, age 76, both hemispheres
149.0
1828
Male, age 53, unknown
145.8
Inferior colliculus nTPM: 150.1
2849
Male, age 72, unknown
155.6
2097
Female, age 72, unknown
155.2
1848
Female, age 42, unknown
147.4
1890
Male, age 53, unknown
142.0
Median raphe nucleus nTPM: 184.6
2220
Male, age 76, midline
184.6
Periaquaductal grey, anterior nTPM: 136.9
1795
Male, age 51, unknown
155.1
1947
Male, age 18, unknown
134.4
2502
Female, age 75, unknown
121.2
Periaquaductal grey, dorsal nTPM: 198.8
2850
Male, age 76, both hemispheres
322.6
1840
Male, age 53, unknown
166.5
1831
Male, age 72, unknown
164.3
2464
Female, age 72, unknown
141.6
Periaquaductal grey, lateral nTPM: 196.9
2140
Male, age 76, both hemispheres
250.0
2053
Male, age 18, unknown
207.3
2272
Male, age 74, both hemispheres
133.3
Pretectal area nTPM: 169.7
2273
Male, age 74, both hemispheres
218.1
2316
Male, age 76, right hemisphere
196.6
2224
Female, age 72, unknown
190.4
2667
Female, age 75, unknown
185.7
2407
Male, age 75, both hemispheres
179.3
1817
Female, age 42, unknown
171.6
1815
Male, age 53, unknown
164.0
1944
Female, age 72, unknown
157.1
2825
Male, age 18, unknown
156.3
1816
Male, age 51, unknown
127.1
2007
Male, age 72, unknown
120.6
Red nucleus nTPM: 137.8
2725
Female, age 75, unknown
200.5
1865
Male, age 51, unknown
170.3
1954
Female, age 42, unknown
162.4
2503
Female, age 72, unknown
162.1
1904
Male, age 53, unknown
145.2
2823
Male, age 76, right hemisphere
140.9
2769
Male, age 72, unknown
136.9
2785
Male, age 18, unknown
130.8
2227
Male, age 72, unknown
130.4
1821
Female, age 72, unknown
125.7
2584
Male, age 75, left hemisphere
77.3
2588
Male, age 74, left hemisphere
70.9
Substantia nigra nTPM: 125.7
2699
Male, age 18, unknown
167.7
1941
Male, age 53, unknown
154.2
2241
Male, age 72, unknown
138.6
1889
Female, age 72, unknown
136.3
1851
Male, age 51, unknown
124.5
1916
Female, age 42, unknown
124.4
2409
Female, age 72, unknown
112.3
2665
Male, age 74, both hemispheres
106.0
2590
Female, age 75, unknown
97.2
2583
Male, age 75, right hemisphere
95.4
Superior colliculus nTPM: 157.1
1995
Male, age 72, unknown
220.1
1913
Female, age 42, unknown
202.0
2587
Male, age 74, left hemisphere
167.7
2087
Female, age 72, unknown
150.0
1796
Male, age 53, unknown
148.3
2664
Male, age 75, both hemispheres
145.3
1839
Male, age 51, unknown
142.8
1895
Male, age 76, right hemisphere
136.3
2668
Female, age 75, unknown
131.6
2261
Male, age 18, unknown
126.3
Ventral tegmental area nTPM: 158.6
2223
Female, age 72, unknown
181.4
2021
Male, age 53, unknown
165.7
1915
Female, age 42, unknown
164.0
1942
Male, age 51, unknown
162.9
2218
Male, age 76, both hemispheres
146.1
2410
Female, age 72, unknown
131.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
496.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 496.4
Samples: 139
Max nTPM: 1222.6
Min nTPM: 215.0
Std nTPM: 184.1
Median nTPM: 443.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1222.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
1049.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
991.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
928.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
921.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
912.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
888.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
880.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
844.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
844.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
815.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
758.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
750.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
749.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
739.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
738.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
738.2
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
734.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
732.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
726.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
721.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
716.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
714.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
712.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
659.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
647.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
629.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
608.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
605.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
603.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
589.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
587.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
585.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
583.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
572.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
572.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
570.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
564.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
562.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
555.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
555.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
555.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
554.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
553.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
542.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
536.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
532.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
523.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
508.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
506.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
504.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
502.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
498.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
484.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
484.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
482.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
482.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
481.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
480.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
476.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
474.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
472.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
469.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
460.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
458.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
455.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
454.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
447.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
445.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
443.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
441.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
439.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
439.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
437.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
437.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
434.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
434.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
432.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
427.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
425.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
425.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
423.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
418.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
418.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
417.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
416.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
412.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
411.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
409.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
409.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
408.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
402.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
401.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
399.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
394.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
394.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
392.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
382.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
374.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
374.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
373.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
369.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
363.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
363.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
359.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
357.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
355.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
351.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
351.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
350.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
350.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
349.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
345.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
341.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
337.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
334.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
334.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
331.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
330.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
330.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
328.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
323.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
323.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
317.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
314.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
314.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
313.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
308.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
293.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
289.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
285.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
281.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
275.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
272.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
269.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
251.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
224.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
220.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
215.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
863.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 863.2
Samples: 4
Max nTPM: 935.7
Min nTPM: 790.8
Sample A
Male
935.7
Sample B
Male
814.5
Sample C
Female
790.8
Sample D
Female
911.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.