HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:917.0 nTPM
HPA Brain:1812.4 nTPM
GTEx:917.0 nTPM
FANTOM5:1423.7 Scaled Tags Per Million
Pig:1686.7 nTPM
Mouse:1167.9 nTPM
Allen mouse:3.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044999
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 1812.4
Sample id Sample description nTPM
Hippocampus
nTPM: 1382.6
2621 Female, age 67, right hemisphere 1805.8
1898 Male, age 80, left hemisphere 1635.2
2148 Female, age 91, left hemisphere 1389.3
1855 Male, age 76, left hemisphere 1313.5
1911 Female, age 85, right hemisphere 1183.7
2529 Female, age 94, left hemisphere 968.0
Dentate gyrus
nTPM: 1472.6
1927 Female, age 91, both hemispheres 1973.7
2530 Female, age 94, left hemisphere 1698.0
2010 Male, age 76, both hemispheres 1399.3
2246 Female, age 85, both hemispheres 1390.2
2531 Female, age 67, both hemispheres 1301.9
2528 Male, age 74, both hemispheres 1072.4
Entorhinal gyrus
nTPM: 1309.8
2613 Female, age 94, left hemisphere 1706.1
2764 Male, age 80, right hemisphere 1517.5
1938 Female, age 85, left hemisphere 1380.2
1787 Male, age 76, left hemisphere 1346.2
2686 Male, age 75, right hemisphere 1128.2
2117 Female, age 91, right hemisphere 780.8
Hippocampus, CA1
nTPM: 1758.6
2749 Male, age 80, left hemisphere 3240.5
2527 Male, age 74, both hemispheres 1547.6
1873 Female, age 85, both hemispheres 1543.0
2045 Male, age 76, both hemispheres 1244.2
2082 Female, age 91, right hemisphere 1217.7
Hippocampus, CA2
nTPM: 1466.7
1892 Male, age 76, both hemispheres 1974.4
1963 Male, age 80, left hemisphere 1909.5
2249 Male, age 74, both hemispheres 1377.5
2437 Female, age 94, left hemisphere 1252.0
2113 Female, age 91, right hemisphere 1212.7
1940 Female, age 85, left hemisphere 1074.4
Hippocampus, CA3
nTPM: 1611.3
2137 Male, age 80, left hemisphere 2807.1
2620 Female, age 94, left hemisphere 1632.2
1867 Male, age 76, both hemispheres 1516.1
2861 Female, age 67, both hemispheres 1491.7
2436 Male, age 74, both hemispheres 1210.5
1891 Female, age 85, both hemispheres 1010.3
Parahippocampal cortex
nTPM: 1463.5
2245 Female, age 91, both hemispheres 2158.2
2250 Female, age 67, right hemisphere 1627.4
1850 Male, age 80, both hemispheres 1583.9
2532 Female, age 72, left hemisphere 1522.9
2622 Female, age 67, right hemisphere 1453.7
1990 Female, age 91, right hemisphere 1398.2
2693 Female, age 94, both hemispheres 1346.0
1933 Female, age 85, both hemispheres 1332.6
2018 Male, age 76, both hemispheres 1138.0
2692 Male, age 74, both hemispheres 1074.4
Perirhinal gyrus
nTPM: 1812.4
1847 Female, age 91, left hemisphere 2244.4
2521 Female, age 94, right hemisphere 1908.1
1794 Male, age 80, right hemisphere 1872.3
1841 Female, age 85, right hemisphere 1665.7
2848 Male, age 76, right hemisphere 1371.7
Subiculum
nTPM: 1177.6
1901 Male, age 80, both hemispheres 1586.7
1977 Female, age 85, both hemispheres 1267.0
2438 Female, age 94, left hemisphere 1174.0
2619 Male, age 74, both hemispheres 1151.4
2042 Male, age 76, both hemispheres 1091.0
2729 Female, age 91, right hemisphere 795.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 917.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 917.0
Samples: 255

Max nTPM: 2663.9
Min nTPM: 195.3
Std nTPM: 545.1
Median nTPM: 761.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 2663.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 2365.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 2335.9
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 2316.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 2235.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 2222.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 2214.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 2186.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 2176.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 2137.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 2093.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1423.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1423.7
FF:10169-103B7 60 years, female 2097.9
FF:10153-102I9 76 years, female 749.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1686.7
Pig sample Sample description nTPM
Subiculum
nTPM: 1540.4
Samples: 4

Max nTPM: 2063.3
Min nTPM: 1215.9
Sample A Female 2063.3
Sample B Female 1361.0
Sample C Male 1521.3
Sample D Male 1215.9
Dorsal hippocampus
nTPM: 1617.7
Samples: 4

Max nTPM: 1968.5
Min nTPM: 1324.5
Sample A Female 1968.5
Sample B Female 1768.0
Sample C Male 1409.7
Sample D Male 1324.5
Entorhinal cortex
nTPM: 1680.2
Samples: 4

Max nTPM: 1818.7
Min nTPM: 1595.1
Sample A Female 1700.5
Sample B Female 1606.5
Sample C Male 1818.7
Sample D Male 1595.1
Ventral hippocampus
nTPM: 1686.7
Samples: 4

Max nTPM: 2003.0
Min nTPM: 1183.2
Sample A Female 1744.4
Sample B Female 1183.2
Sample C Male 2003.0
Sample D Male 1816.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1167.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 977.9
Samples: 4

Max nTPM: 1011.6
Min nTPM: 961.6
Sample A Male 961.6
Sample B Male 975.4
Sample C Female 962.9
Sample D Female 1011.6
Hippocampal formation
nTPM: 1167.9
Samples: 4

Max nTPM: 1303.6
Min nTPM: 1091.3
Sample A Male 1091.3
Sample B Male 1160.7
Sample C Female 1303.6
Sample D Female 1116.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
184 Antisense, RP_Baylor_102654, Mouse strain C57BL/6J (56 days, male) 3.5

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