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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
260.1
nTPM
Monaco:
275.6
nTPM
Schmiedel:
163.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
260.1
HPA sample
nTPM
gdT-cell nTPM: 260.1
Samples: 6
Max nTPM: 339.8
Min nTPM: 108.5
P10809_1007
247.5
P10809_1022
339.8
P10809_1041
276.3
P10809_1060
339.0
P10809_1077
108.5
P10809_1098
249.4
MAIT T-cell nTPM: 190.6
Samples: 6
Max nTPM: 227.2
Min nTPM: 126.4
P10809_1006
173.7
P10809_1024
203.6
P10809_1043
225.0
P10809_1062
227.2
P10809_1083
126.4
P10809_1097
187.8
Memory CD4 T-cell nTPM: 174.7
Samples: 6
Max nTPM: 232.1
Min nTPM: 113.2
P10809_1014
125.6
P10809_1026
232.1
P10809_1045
202.4
P10809_1064
231.7
P10809_1086
113.2
P10809_1113
143.0
Memory CD8 T-cell nTPM: 224.5
Samples: 5
Max nTPM: 306.8
Min nTPM: 149.5
P10809_1012
177.5
P10809_1027
233.8
P10809_1046
254.8
P10809_1065
306.8
P10809_1111
149.5
Naive CD4 T-cell nTPM: 214.2
Samples: 6
Max nTPM: 310.8
Min nTPM: 135.5
P10809_1015
135.5
P10809_1030
244.8
P10809_1049
310.8
P10809_1068
237.0
P10809_1085
160.0
P10809_1112
197.2
Naive CD8 T-cell nTPM: 246.1
Samples: 6
Max nTPM: 350.2
Min nTPM: 122.9
P10809_1016
196.3
P10809_1031
300.8
P10809_1050
277.9
P10809_1069
350.2
P10809_1087
122.9
P10809_1110
228.3
T-reg nTPM: 141.3
Samples: 6
Max nTPM: 208.7
Min nTPM: 100.7
P10809_1018
100.7
P10809_1037
142.9
P10809_1056
208.7
P10809_1075
121.6
P10809_1094
108.4
P10809_1106
165.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
275.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 172.8
Samples: 4
Max nTPM: 227.7
Min nTPM: 133.2
RHH5202_R3573
133.2
RHH5230_R3602
176.4
RHH5259_R3631
153.8
RHH5288_R3660
227.7
Effector memory CD8 T-cell nTPM: 188.5
Samples: 4
Max nTPM: 231.3
Min nTPM: 136.1
RHH5203_R3574
136.1
RHH5231_R3603
230.2
RHH5260_R3632
156.5
RHH5289_R3661
231.3
MAIT T-cell nTPM: 174.6
Samples: 4
Max nTPM: 214.3
Min nTPM: 139.3
RHH5233_R3605
139.3
RHH5205_R3576
157.0
RHH5262_R3634
214.3
RHH5297_R3663
187.7
Memory CD4 T-cell TFH nTPM: 142.0
Samples: 4
Max nTPM: 177.4
Min nTPM: 116.7
RHH5300_R3666
139.0
RHH5236_R3608
177.4
RHH5265_R3637
134.7
RHH5208_R3579
116.7
Memory CD4 T-cell Th1 nTPM: 185.7
Samples: 4
Max nTPM: 199.0
Min nTPM: 161.1
RHH5210_R3581
189.6
RHH5302_R3668
193.0
RHH5238_R3610
161.1
RHH5267_R3639
199.0
Memory CD4 T-cell Th1/Th17 nTPM: 181.0
Samples: 4
Max nTPM: 214.2
Min nTPM: 146.0
RHH5303_R3669
214.2
RHH5211_R3582
181.1
RHH5239_R3611
146.0
RHH5268_R3640
182.6
Memory CD4 T-cell Th17 nTPM: 134.3
Samples: 4
Max nTPM: 161.2
Min nTPM: 122.8
RHH5304_R3670
161.2
RHH5212_R3583
125.2
RHH5240_R3612
122.8
RHH5269_R3641
127.8
Memory CD4 T-cell Th2 nTPM: 145.8
Samples: 4
Max nTPM: 159.7
Min nTPM: 132.8
RHH5305_R3671
132.8
RHH5213_R3584
133.1
RHH5241_R3613
157.5
RHH5270_R3642
159.7
Naive CD4 T-cell nTPM: 236.7
Samples: 4
Max nTPM: 244.1
Min nTPM: 222.1
RHH5306_R3672
242.4
RHH5214_R3585
244.1
RHH5242_R3614
238.1
RHH5271_R3643
222.1
Naive CD8 T-cell nTPM: 275.6
Samples: 4
Max nTPM: 327.5
Min nTPM: 208.9
RHH5201_R3572
327.5
RHH5229_R3601
208.9
RHH5258_R3630
285.4
RHH5287_R3659
280.5
Non-Vd2 gdTCR nTPM: 174.8
Samples: 4
Max nTPM: 217.9
Min nTPM: 134.3
RHH5235_R3607
190.7
RHH5264_R3636
156.4
RHH5207_R3578
134.3
RHH5299_R3665
217.9
T-reg nTPM: 141.7
Samples: 4
Max nTPM: 148.7
Min nTPM: 129.0
RHH5301_R3667
141.4
RHH5237_R3609
147.5
RHH5266_R3638
129.0
RHH5209_R3580
148.7
Terminal effector memory CD4 T-cell nTPM: 243.6
Samples: 2
Max nTPM: 255.7
Min nTPM: 231.4
RHH5243_R3615
255.7
RHH5272_R3644
231.4
Terminal effector memory CD8 T-cell nTPM: 224.3
Samples: 4
Max nTPM: 331.7
Min nTPM: 119.9
RHH5232_R3604
259.6
RHH5204_R3575
119.9
RHH5261_R3633
186.1
RHH5296_R3662
331.7
Vd2 gdTCR nTPM: 235.6
Samples: 4
Max nTPM: 264.6
Min nTPM: 209.5
RHH5234_R3606
233.7
RHH5206_R3577
209.5
RHH5263_R3635
234.4
RHH5298_R3664
264.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.