HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.9 nTPM
HPA Brain:9.5 nTPM
GTEx:9.9 nTPM
FANTOM5:12.7 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:36.2 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 9.5
Sample id Sample description nTPM
Hippocampus
nTPM: 8.8
2529 Female, age 94, left hemisphere 12.6
2148 Female, age 91, left hemisphere 10.0
1911 Female, age 85, right hemisphere 9.8
1898 Male, age 80, left hemisphere 7.8
1855 Male, age 76, left hemisphere 6.8
2621 Female, age 67, right hemisphere 6.0
Dentate gyrus
nTPM: 7.2
2010 Male, age 76, both hemispheres 9.0
2530 Female, age 94, left hemisphere 8.1
1927 Female, age 91, both hemispheres 7.2
2246 Female, age 85, both hemispheres 6.8
2528 Male, age 74, both hemispheres 6.5
2531 Female, age 67, both hemispheres 5.4
Entorhinal gyrus
nTPM: 8.5
1938 Female, age 85, left hemisphere 9.2
2764 Male, age 80, right hemisphere 9.1
2117 Female, age 91, right hemisphere 8.8
2613 Female, age 94, left hemisphere 8.4
2686 Male, age 75, right hemisphere 8.0
1787 Male, age 76, left hemisphere 7.5
Hippocampus, CA1
nTPM: 7.1
2082 Female, age 91, right hemisphere 8.2
2749 Male, age 80, left hemisphere 7.6
1873 Female, age 85, both hemispheres 6.9
2045 Male, age 76, both hemispheres 6.7
2527 Male, age 74, both hemispheres 6.2
Hippocampus, CA2
nTPM: 9.2
1963 Male, age 80, left hemisphere 10.0
2249 Male, age 74, both hemispheres 9.6
1892 Male, age 76, both hemispheres 9.4
2113 Female, age 91, right hemisphere 9.1
2437 Female, age 94, left hemisphere 8.5
1940 Female, age 85, left hemisphere 8.3
Hippocampus, CA3
nTPM: 8.7
2620 Female, age 94, left hemisphere 10.7
2137 Male, age 80, left hemisphere 9.5
2861 Female, age 67, both hemispheres 9.0
1867 Male, age 76, both hemispheres 8.4
1891 Female, age 85, both hemispheres 8.0
2436 Male, age 74, both hemispheres 6.6
Parahippocampal cortex
nTPM: 8.3
1990 Female, age 91, right hemisphere 10.5
2245 Female, age 91, both hemispheres 9.7
1933 Female, age 85, both hemispheres 9.4
2692 Male, age 74, both hemispheres 9.1
2622 Female, age 67, right hemisphere 8.8
2250 Female, age 67, right hemisphere 7.9
2018 Male, age 76, both hemispheres 7.5
2532 Female, age 72, left hemisphere 7.3
2693 Female, age 94, both hemispheres 7.3
1850 Male, age 80, both hemispheres 6.0
Perirhinal gyrus
nTPM: 7.3
2848 Male, age 76, right hemisphere 10.6
2521 Female, age 94, right hemisphere 6.8
1847 Female, age 91, left hemisphere 6.6
1794 Male, age 80, right hemisphere 6.5
1841 Female, age 85, right hemisphere 5.8
Subiculum
nTPM: 9.5
2042 Male, age 76, both hemispheres 14.9
2729 Female, age 91, right hemisphere 10.0
2619 Male, age 74, both hemispheres 9.5
1901 Male, age 80, both hemispheres 8.8
1977 Female, age 85, both hemispheres 8.6
2438 Female, age 94, left hemisphere 5.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.9
Samples: 255

Max nTPM: 27.6
Min nTPM: 3.4
Std nTPM: 3.1
Median nTPM: 9.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 27.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 21.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.9
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 19.4
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 18.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.0
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 17.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 17.8
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 16.9
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 15.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 12.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.7
FF:10169-103B7 60 years, female 13.5
FF:10153-102I9 76 years, female 12.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.2
Pig sample Sample description nTPM
Subiculum
nTPM: 13.3
Samples: 4

Max nTPM: 14.5
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 14.5
Sample C Male 14.3
Sample D Male 13.2
Dorsal hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 14.3
Min nTPM: 11.0
Sample A Female 11.0
Sample B Female 13.0
Sample C Male 14.0
Sample D Male 14.3
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.1
Sample A Female 12.1
Sample B Female 12.3
Sample C Male 12.1
Sample D Male 15.2
Ventral hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 15.0
Min nTPM: 13.6
Sample A Female 13.9
Sample B Female 15.0
Sample C Male 13.6
Sample D Male 14.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 36.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.8
Samples: 4

Max nTPM: 36.2
Min nTPM: 31.6
Sample A Male 31.6
Sample B Male 32.9
Sample C Female 34.4
Sample D Female 36.2
Hippocampal formation
nTPM: 36.2
Samples: 4

Max nTPM: 38.1
Min nTPM: 32.0
Sample A Male 37.8
Sample B Male 32.0
Sample C Female 38.1
Sample D Female 36.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74431804 Antisense, RP_060207_02_E08, Mouse strain C57BL/6J (56 days, male) 0.1

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