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  • SUMMARY

  • TISSUE

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  • LAPTM5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:38.2 nTPM
HPA Brain:79.3 nTPM
GTEx:38.2 nTPM
Pig:189.0 nTPM
Mouse:26.5 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 39.5
2226 Male, age 75, left hemisphere 53.2
1961 Female, age 42, unknown 25.7
Dorsomedial nucleus
nTPM: 44.2
2041 Female, age 72, unknown 49.1
1989 Male, age 62, unknown 44.2
2017 Female, age 42, unknown 39.1
Lateral hypothalamic area
nTPM: 63.8
2271 Male, age 75, both hemispheres 102.8
2412 Male, age 62, unknown 63.6
1791 Male, age 80, right hemisphere 45.9
2228 Male, age 66, unknown 42.8
Mammillary body
nTPM: 56.9
1834 Female, age 42, unknown 75.9
2413 Male, age 66, unknown 68.3
1945 Male, age 80, right hemisphere 49.0
1948 Female, age 72, unknown 47.8
1923 Female, age 72, unknown 43.5
Paraventricular nucleus
nTPM: 68.8
2700 Male, age 62, unknown 68.8
Preoptic area
nTPM: 33.6
2414 Female, age 72, unknown 43.8
1861 Female, age 42, unknown 39.3
1907 Male, age 80, right hemisphere 17.9
Supraoptic nucleus
nTPM: 79.3
2043 Male, age 62, unknown 94.4
1894 Female, age 72, unknown 87.7
2835 Female, age 72, unknown 55.6
Ventromedial nucleus
nTPM: 34.4
1982 Female, age 72, unknown 37.1
1822 Female, age 42, unknown 31.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 38.2
Samples: 257

Max nTPM: 204.4
Min nTPM: 3.7
Std nTPM: 29.4
Median nTPM: 30.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 204.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 166.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 165.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 144.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 130.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 123.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 123.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 109.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 108.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 106.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 103.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 100.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 97.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 94.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 90.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 90.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 86.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 85.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 83.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 83.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 82.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 79.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 79.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 78.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 77.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 77.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 74.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 74.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 73.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 72.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 68.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 65.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 65.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 64.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 64.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 63.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 62.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 61.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 61.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 59.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 59.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 58.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 58.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 57.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 57.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 56.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 56.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 54.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 53.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 51.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 51.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 51.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 50.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 49.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 49.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 49.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 49.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 49.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 49.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 48.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 48.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 48.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 47.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 47.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 47.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 47.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 46.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 46.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 46.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 46.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 45.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 45.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 44.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 44.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 44.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 44.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 44.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 43.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 43.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 42.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 42.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 41.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 41.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 41.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 41.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 40.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 40.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 40.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 39.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 39.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 39.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 38.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 38.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 38.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 38.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 38.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 38.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 38.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 38.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 37.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 37.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 37.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 37.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 36.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 36.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 36.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 36.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 36.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 35.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 34.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 34.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 34.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 34.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 34.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 34.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 33.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 33.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 33.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 32.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 32.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 32.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 31.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 31.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 31.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 31.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 30.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 30.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 30.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 30.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 30.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 29.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 29.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 29.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 29.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 28.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 28.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 28.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 28.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 28.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 28.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 27.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 27.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 27.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 27.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 27.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 26.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 26.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 26.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 26.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 26.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 26.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 26.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 25.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 25.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 25.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 25.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 25.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 25.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 25.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 25.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 25.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 25.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 24.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 24.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 24.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 24.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 24.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 24.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 24.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 23.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 23.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 23.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 23.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 23.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 23.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 22.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 22.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 22.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 22.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 21.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 21.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 20.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 20.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 20.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 20.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 20.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 20.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 19.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 19.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 19.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 19.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 18.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 18.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 18.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 17.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 17.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 17.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 17.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 17.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 17.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 16.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 16.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 15.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 15.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 15.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 15.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 15.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 15.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 15.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 14.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 14.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 13.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 13.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 13.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 13.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 13.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 13.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 13.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 12.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 12.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 12.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 12.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 12.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 12.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 12.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 11.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 11.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 11.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 11.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 11.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 11.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 10.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 10.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 10.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 10.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 10.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 10.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 10.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 10.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 10.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 9.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 9.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 9.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 9.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 8.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 8.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 8.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 8.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 8.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 8.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 6.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 6.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 5.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 5.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 4.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 3.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

189.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 189.0
Samples: 4

Max nTPM: 267.4
Min nTPM: 130.9
Sample A Female 267.4
Sample B Female 211.0
Sample C Male 146.7
Sample D Male 130.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 26.6
Samples: 4

Max nTPM: 29.0
Min nTPM: 23.9
Sample A Male 23.9
Sample B Male 29.0
Sample C Female 24.8
Sample D Female 28.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
100145372 Antisense, RP_110519_02_F11, Mouse strain C57BL/6J (56 days, male) 0.0

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