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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
26.7
nTPM
Monaco:
131.3
nTPM
Schmiedel:
430.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.7
HPA sample
nTPM
gdT-cell nTPM: 20.0
Samples: 6
Max nTPM: 22.3
Min nTPM: 17.2
P10809_1007
19.3
P10809_1022
19.1
P10809_1041
17.2
P10809_1060
20.9
P10809_1077
21.0
P10809_1098
22.3
MAIT T-cell nTPM: 25.0
Samples: 6
Max nTPM: 33.1
Min nTPM: 18.6
P10809_1006
30.9
P10809_1024
22.8
P10809_1043
20.7
P10809_1062
23.9
P10809_1083
33.1
P10809_1097
18.6
Memory CD4 T-cell nTPM: 20.9
Samples: 6
Max nTPM: 25.5
Min nTPM: 15.1
P10809_1014
24.8
P10809_1026
15.1
P10809_1045
15.3
P10809_1064
21.7
P10809_1086
23.2
P10809_1113
25.5
Memory CD8 T-cell nTPM: 22.4
Samples: 5
Max nTPM: 30.6
Min nTPM: 17.1
P10809_1012
23.5
P10809_1027
21.5
P10809_1046
17.1
P10809_1065
19.2
P10809_1111
30.6
Naive CD4 T-cell nTPM: 19.8
Samples: 6
Max nTPM: 30.0
Min nTPM: 15.1
P10809_1015
30.0
P10809_1030
16.1
P10809_1049
15.1
P10809_1068
18.3
P10809_1085
18.3
P10809_1112
20.9
Naive CD8 T-cell nTPM: 23.3
Samples: 6
Max nTPM: 33.7
Min nTPM: 16.9
P10809_1016
25.4
P10809_1031
21.5
P10809_1050
16.9
P10809_1069
22.2
P10809_1087
33.7
P10809_1110
19.8
T-reg nTPM: 26.7
Samples: 6
Max nTPM: 40.3
Min nTPM: 16.6
P10809_1018
40.3
P10809_1037
25.0
P10809_1056
16.6
P10809_1075
27.0
P10809_1094
26.3
P10809_1106
24.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 100.1
Samples: 4
Max nTPM: 131.7
Min nTPM: 73.3
RHH5202_R3573
131.7
RHH5230_R3602
73.3
RHH5259_R3631
95.3
RHH5288_R3660
99.9
Effector memory CD8 T-cell nTPM: 105.2
Samples: 4
Max nTPM: 114.3
Min nTPM: 100.6
RHH5203_R3574
114.3
RHH5231_R3603
101.1
RHH5260_R3632
104.9
RHH5289_R3661
100.6
MAIT T-cell nTPM: 112.7
Samples: 4
Max nTPM: 131.7
Min nTPM: 101.1
RHH5233_R3605
103.7
RHH5205_R3576
131.7
RHH5262_R3634
114.1
RHH5297_R3663
101.1
Memory CD4 T-cell TFH nTPM: 91.2
Samples: 4
Max nTPM: 122.8
Min nTPM: 72.3
RHH5300_R3666
79.7
RHH5236_R3608
72.3
RHH5265_R3637
90.1
RHH5208_R3579
122.8
Memory CD4 T-cell Th1 nTPM: 89.5
Samples: 4
Max nTPM: 99.6
Min nTPM: 82.1
RHH5210_R3581
91.9
RHH5302_R3668
99.6
RHH5238_R3610
84.3
RHH5267_R3639
82.1
Memory CD4 T-cell Th1/Th17 nTPM: 105.6
Samples: 4
Max nTPM: 141.8
Min nTPM: 75.3
RHH5303_R3669
117.0
RHH5211_R3582
88.3
RHH5239_R3611
141.8
RHH5268_R3640
75.3
Memory CD4 T-cell Th17 nTPM: 104.7
Samples: 4
Max nTPM: 140.2
Min nTPM: 77.2
RHH5304_R3670
119.6
RHH5212_R3583
81.7
RHH5240_R3612
140.2
RHH5269_R3641
77.2
Memory CD4 T-cell Th2 nTPM: 86.7
Samples: 4
Max nTPM: 99.2
Min nTPM: 78.5
RHH5305_R3671
89.5
RHH5213_R3584
99.2
RHH5241_R3613
78.5
RHH5270_R3642
79.5
Naive CD4 T-cell nTPM: 103.1
Samples: 4
Max nTPM: 112.4
Min nTPM: 87.1
RHH5306_R3672
112.4
RHH5214_R3585
87.1
RHH5242_R3614
102.9
RHH5271_R3643
110.1
Naive CD8 T-cell nTPM: 131.3
Samples: 4
Max nTPM: 173.3
Min nTPM: 99.3
RHH5201_R3572
173.3
RHH5229_R3601
146.5
RHH5258_R3630
105.9
RHH5287_R3659
99.3
Non-Vd2 gdTCR nTPM: 99.4
Samples: 4
Max nTPM: 115.9
Min nTPM: 70.4
RHH5235_R3607
102.1
RHH5264_R3636
115.9
RHH5207_R3578
109.1
RHH5299_R3665
70.4
T-reg nTPM: 95.7
Samples: 4
Max nTPM: 108.8
Min nTPM: 84.5
RHH5301_R3667
98.3
RHH5237_R3609
91.0
RHH5266_R3638
84.5
RHH5209_R3580
108.8
Terminal effector memory CD4 T-cell nTPM: 77.4
Samples: 2
Max nTPM: 78.1
Min nTPM: 76.6
RHH5243_R3615
76.6
RHH5272_R3644
78.1
Terminal effector memory CD8 T-cell nTPM: 98.9
Samples: 4
Max nTPM: 114.4
Min nTPM: 79.3
RHH5232_R3604
79.3
RHH5204_R3575
97.1
RHH5261_R3633
114.4
RHH5296_R3662
104.8
Vd2 gdTCR nTPM: 107.1
Samples: 4
Max nTPM: 145.1
Min nTPM: 82.4
RHH5234_R3606
82.4
RHH5206_R3577
111.0
RHH5263_R3635
145.1
RHH5298_R3664
89.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.