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  • TISSUE

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  • BAALC
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:182.5 nTPM
HPA Brain:242.9 nTPM
GTEx:182.5 nTPM
Pig:82.9 nTPM
Mouse:132.1 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

242.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 216.9
1961 Female, age 42, unknown 231.9
2226 Male, age 75, left hemisphere 201.9
Dorsomedial nucleus
nTPM: 240.4
1989 Male, age 62, unknown 288.9
2017 Female, age 42, unknown 222.7
2041 Female, age 72, unknown 209.7
Lateral hypothalamic area
nTPM: 191.2
1791 Male, age 80, right hemisphere 258.9
2412 Male, age 62, unknown 201.2
2271 Male, age 75, both hemispheres 192.2
2228 Male, age 66, unknown 112.7
Mammillary body
nTPM: 233.7
2413 Male, age 66, unknown 265.5
1834 Female, age 42, unknown 247.3
1945 Male, age 80, right hemisphere 235.4
1923 Female, age 72, unknown 212.4
1948 Female, age 72, unknown 208.1
Paraventricular nucleus
nTPM: 171.3
2700 Male, age 62, unknown 171.3
Preoptic area
nTPM: 217.8
1861 Female, age 42, unknown 252.5
1907 Male, age 80, right hemisphere 219.1
2414 Female, age 72, unknown 181.9
Supraoptic nucleus
nTPM: 242.9
2043 Male, age 62, unknown 268.7
1894 Female, age 72, unknown 240.0
2835 Female, age 72, unknown 219.9
Ventromedial nucleus
nTPM: 221.2
1982 Female, age 72, unknown 227.8
1822 Female, age 42, unknown 214.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

182.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 182.5
Samples: 257

Max nTPM: 529.1
Min nTPM: 66.7
Std nTPM: 74.8
Median nTPM: 168.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 529.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 501.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 496.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 491.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 464.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 431.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 386.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 385.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 352.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 342.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 328.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 325.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 324.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 322.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 316.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 305.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 296.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 293.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 292.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 291.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 285.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 281.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 279.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 271.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 270.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 268.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 268.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 266.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 264.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 262.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 259.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 258.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 257.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 254.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 250.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 249.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 249.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 247.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 245.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 238.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 236.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 232.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 231.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 229.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 228.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 227.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 226.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 222.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 221.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 221.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 221.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 217.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 217.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 217.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 215.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 215.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 215.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 214.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 213.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 212.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 212.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 211.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 211.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 210.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 210.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 208.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 208.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 207.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 206.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 206.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 206.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 204.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 204.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 203.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 202.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 201.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 200.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 200.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 200.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 197.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 195.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 194.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 194.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 193.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 192.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 192.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 191.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 191.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 190.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 190.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 188.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 188.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 187.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 186.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 185.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 185.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 184.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 183.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 182.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 182.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 181.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 181.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 181.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 181.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 180.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 179.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 179.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 179.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 178.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 178.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 176.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 176.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 176.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 175.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 175.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 174.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 173.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 172.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 172.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 172.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 172.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 171.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 170.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 170.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 170.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 169.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 169.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 168.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 168.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 167.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 167.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 166.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 166.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 165.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 165.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 164.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 164.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 163.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 163.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 162.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 161.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 160.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 160.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 158.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 158.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 157.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 157.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 156.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 155.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 155.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 154.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 154.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 153.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 151.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 151.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 150.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 150.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 150.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 150.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 149.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 149.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 148.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 147.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 146.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 146.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 146.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 146.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 146.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 145.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 145.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 144.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 143.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 142.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 142.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 142.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 142.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 141.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 140.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 140.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 140.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 139.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 139.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 139.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 138.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 137.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 137.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 137.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 136.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 136.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 136.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 135.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 134.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 133.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 133.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 131.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 131.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 131.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 131.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 130.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 130.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 130.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 130.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 128.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 128.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 128.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 128.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 126.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 125.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 125.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 124.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 124.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 123.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 123.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 123.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 123.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 121.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 121.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 121.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 120.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 120.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 119.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 119.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 119.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 116.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 116.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 115.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 115.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 114.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 112.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 111.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 110.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 110.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 109.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 109.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 109.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 107.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 106.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 106.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 105.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 104.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 104.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 103.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 103.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 101.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 99.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 99.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 97.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 91.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 88.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 87.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 86.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 86.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 81.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 81.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 75.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 74.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 66.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 82.9
Samples: 4

Max nTPM: 108.5
Min nTPM: 50.7
Sample A Female 108.5
Sample B Female 97.5
Sample C Male 74.9
Sample D Male 50.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 132.2
Samples: 4

Max nTPM: 149.0
Min nTPM: 120.1
Sample A Male 120.1
Sample B Male 149.0
Sample C Female 134.0
Sample D Female 125.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.4
69528040 Antisense, RP_050421_03_A03, Mouse strain C57BL/6J (56 days, male) 0.9
73520964 Antisense, RP_051017_04_E04, Mouse strain C57BL/6J (56 days, male) 0.0

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