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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
197.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 168.1
1870
Female, age 42, unknown
205.8
2411
Female, age 72, unknown
194.0
1827
Male, age 72, unknown
182.4
2019
Male, age 18, unknown
180.3
1833
Male, age 53, unknown
180.2
2828
Female, age 72, unknown
174.9
1830
Male, age 51, unknown
167.3
2219
Male, age 76, both hemispheres
161.5
2666
Male, age 74, left hemisphere
127.1
2586
Male, age 75, left hemisphere
107.3
Dorsal raphe nucleus nTPM: 189.6
2298
Female, age 72, unknown
220.2
2750
Male, age 76, both hemispheres
195.4
2016
Female, age 72, unknown
183.7
1828
Male, age 53, unknown
177.1
2047
Male, age 72, unknown
171.4
Inferior colliculus nTPM: 187.2
2097
Female, age 72, unknown
202.3
1848
Female, age 42, unknown
189.2
2849
Male, age 72, unknown
179.2
1890
Male, age 53, unknown
178.1
Median raphe nucleus nTPM: 188.2
2220
Male, age 76, midline
188.2
Periaquaductal grey, anterior nTPM: 174.1
1947
Male, age 18, unknown
185.5
2502
Female, age 75, unknown
178.2
1795
Male, age 51, unknown
158.7
Periaquaductal grey, dorsal nTPM: 184.0
2850
Male, age 76, both hemispheres
219.6
1840
Male, age 53, unknown
179.5
1831
Male, age 72, unknown
170.1
2464
Female, age 72, unknown
166.7
Periaquaductal grey, lateral nTPM: 197.4
2272
Male, age 74, both hemispheres
209.3
2140
Male, age 76, both hemispheres
199.0
2053
Male, age 18, unknown
183.8
Pretectal area nTPM: 195.0
2273
Male, age 74, both hemispheres
235.1
2224
Female, age 72, unknown
205.6
1817
Female, age 42, unknown
204.4
2667
Female, age 75, unknown
201.6
1815
Male, age 53, unknown
197.3
2007
Male, age 72, unknown
194.9
1816
Male, age 51, unknown
191.3
1944
Female, age 72, unknown
190.1
2316
Male, age 76, right hemisphere
185.7
2825
Male, age 18, unknown
177.8
2407
Male, age 75, both hemispheres
161.6
Red nucleus nTPM: 180.6
1821
Female, age 72, unknown
215.7
1865
Male, age 51, unknown
201.6
2823
Male, age 76, right hemisphere
195.1
1904
Male, age 53, unknown
190.6
1954
Female, age 42, unknown
188.2
2503
Female, age 72, unknown
187.9
2769
Male, age 72, unknown
184.1
2725
Female, age 75, unknown
183.5
2785
Male, age 18, unknown
182.3
2227
Male, age 72, unknown
177.1
2588
Male, age 74, left hemisphere
135.8
2584
Male, age 75, left hemisphere
125.4
Substantia nigra nTPM: 179.3
1889
Female, age 72, unknown
200.5
2409
Female, age 72, unknown
192.2
2241
Male, age 72, unknown
186.9
1851
Male, age 51, unknown
186.6
1916
Female, age 42, unknown
183.7
1941
Male, age 53, unknown
176.5
2699
Male, age 18, unknown
175.7
2590
Female, age 75, unknown
172.3
2665
Male, age 74, both hemispheres
167.9
2583
Male, age 75, right hemisphere
150.7
Superior colliculus nTPM: 178.0
2587
Male, age 74, left hemisphere
200.8
1913
Female, age 42, unknown
199.2
1895
Male, age 76, right hemisphere
189.1
1995
Male, age 72, unknown
185.0
2087
Female, age 72, unknown
183.1
2261
Male, age 18, unknown
177.5
1796
Male, age 53, unknown
175.5
1839
Male, age 51, unknown
175.1
2668
Female, age 75, unknown
167.9
2664
Male, age 75, both hemispheres
127.1
Ventral tegmental area nTPM: 180.8
2410
Female, age 72, unknown
191.2
2218
Male, age 76, both hemispheres
185.2
2223
Female, age 72, unknown
182.2
1915
Female, age 42, unknown
178.3
2021
Male, age 53, unknown
178.0
1942
Male, age 51, unknown
170.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
179.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 179.4
Samples: 183
Max nTPM: 250.9
Min nTPM: 123.4
Std nTPM: 27.4
Median nTPM: 176.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
250.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
250.4
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
248.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
248.2
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
239.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
239.1
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
236.3
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
233.8
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
231.0
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
224.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
222.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
222.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
221.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
221.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
221.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
220.7
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
220.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
219.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
219.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
218.7
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
217.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
215.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
213.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
213.0
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
212.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
211.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
210.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
210.2
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
209.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
209.7
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
207.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
206.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
205.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
205.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
205.1
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
205.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
203.3
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
202.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
202.0
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
201.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
201.7
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
200.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
199.7
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
199.4
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
198.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
197.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
197.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
197.7
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
197.1
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
197.0
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
196.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
196.8
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
196.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
194.8
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
194.3
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
193.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
193.7
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
192.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
191.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
191.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
190.6
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
189.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
189.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
189.5
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
189.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
189.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
187.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
187.4
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
186.3
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
185.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
184.9
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
184.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
184.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
182.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
182.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
182.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
182.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
182.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
181.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
181.0
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
180.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
180.5
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
180.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
179.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
179.2
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
178.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
178.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
178.2
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
177.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
177.1
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
176.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
176.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
175.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
174.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
172.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
172.7
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
172.5
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
172.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
172.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
171.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
171.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
170.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
170.6
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
169.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
169.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
169.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
169.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
168.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
168.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
168.7
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
167.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
167.3
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
167.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
166.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
166.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
166.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
165.6
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
164.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
164.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
164.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
164.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
164.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
164.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
163.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
162.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
162.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
162.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
162.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
161.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
160.3
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
160.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
159.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
159.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
158.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
158.3
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
158.3
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
158.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
157.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
157.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
156.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
156.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
156.1
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
155.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
155.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
155.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
155.0
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
154.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
153.6
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
152.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
151.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
151.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
151.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
151.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
150.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
150.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
150.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
150.7
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
150.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
149.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
149.6
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
149.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
149.3
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
148.6
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
148.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
148.3
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
147.7
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
146.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
146.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
145.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
145.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
145.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
144.8
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
144.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
144.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
143.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
140.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
139.1
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
137.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
137.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
134.6
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
127.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
127.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
123.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
187.9
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 169.8
Samples: 4
Max nTPM: 186.4
Min nTPM: 161.0
Sample A
Female
186.4
Sample B
Female
165.3
Sample C
Male
161.0
Sample D
Male
166.3
Midbrain nTPM: 187.3
Samples: 4
Max nTPM: 240.1
Min nTPM: 158.7
Sample A
Female
240.1
Sample B
Female
174.4
Sample C
Male
176.1
Sample D
Male
158.7
Periaqueductal gray nTPM: 164.8
Samples: 3
Max nTPM: 173.2
Min nTPM: 157.4
Sample B
Female
163.7
Sample C
Male
173.2
Sample D
Male
157.4
Superior colliculi nTPM: 187.9
Samples: 4
Max nTPM: 208.6
Min nTPM: 167.6
Sample A
Female
190.3
Sample B
Female
208.6
Sample C
Male
185.0
Sample D
Male
167.6
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
339.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 339.2
Samples: 4
Max nTPM: 350.9
Min nTPM: 325.8
Sample A
Male
325.8
Sample B
Male
350.9
Sample C
Female
349.6
Sample D
Female
330.3
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.