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  • SUMMARY

  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

127.453
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:80.3 nTPM
HPA Brain:101.3 nTPM
GTEx:80.3 nTPM
Pig:63.6 nTPM
Mouse:156.9 nTPM
Allen mouse:10.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA039176
Hypothalamus mean intensity 127.453
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 32.823
Periventricular hypothalamic nucleus 70.097
Supraoptic nucleus 88.269
Tuberal nucleus -
Ventral tuberomammillary nucleus 17.668
Lateral preoptic area 42.946
Medial preoptic area 61.645
Suprachiasmatic nucleus 56.349
Paraventricular hypothalamic nucleus 78.547
Anterior hypothalamic area, central 43.299
Ventral medial hypothalamic nucleus 82.175
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 122.427
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 15.535
Dorsal medial hypothalamic nucleus 32.657
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 95.6
2226 Male, age 75, left hemisphere 112.5
1961 Female, age 42, unknown 78.8
Dorsomedial nucleus
nTPM: 82.9
1989 Male, age 62, unknown 108.1
2041 Female, age 72, unknown 74.2
2017 Female, age 42, unknown 66.5
Lateral hypothalamic area
nTPM: 101.3
2228 Male, age 66, unknown 116.6
2271 Male, age 75, both hemispheres 107.5
1791 Male, age 80, right hemisphere 104.6
2412 Male, age 62, unknown 76.4
Mammillary body
nTPM: 90.5
1923 Female, age 72, unknown 117.9
2413 Male, age 66, unknown 89.1
1948 Female, age 72, unknown 85.9
1834 Female, age 42, unknown 83.5
1945 Male, age 80, right hemisphere 76.0
Paraventricular nucleus
nTPM: 78.0
2700 Male, age 62, unknown 78.0
Preoptic area
nTPM: 80.0
1907 Male, age 80, right hemisphere 93.2
1861 Female, age 42, unknown 76.1
2414 Female, age 72, unknown 70.6
Supraoptic nucleus
nTPM: 66.4
2835 Female, age 72, unknown 76.2
1894 Female, age 72, unknown 63.2
2043 Male, age 62, unknown 59.9
Ventromedial nucleus
nTPM: 89.8
1982 Female, age 72, unknown 102.7
1822 Female, age 42, unknown 76.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 80.3
Samples: 257

Max nTPM: 152.4
Min nTPM: 42.9
Std nTPM: 19.9
Median nTPM: 79.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 152.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 145.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 131.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 131.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 129.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 127.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 125.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 123.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 123.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 122.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 120.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 120.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 118.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 115.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 114.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 112.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 112.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 112.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 112.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 109.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 108.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 107.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 107.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 106.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 105.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 105.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 104.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 104.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 104.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 102.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 100.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 100.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 100.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 99.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 99.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 99.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 99.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 99.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 99.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 98.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 98.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 97.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 97.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 97.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 97.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 96.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 96.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 96.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 96.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 96.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 96.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 96.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 95.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 95.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 95.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 95.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 95.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 94.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 94.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 94.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 93.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 93.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 93.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 93.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 92.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 92.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 92.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 92.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 92.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 91.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 91.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 91.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 90.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 90.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 90.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 90.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 90.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 89.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 89.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 89.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 89.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 89.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 88.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 88.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 88.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 88.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 88.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 88.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 88.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 88.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 87.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 87.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 87.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 87.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 87.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 87.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 86.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 85.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 85.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 85.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 85.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 85.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 85.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 84.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 84.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 84.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 83.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 83.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 83.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 83.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 83.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 83.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 82.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 82.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 82.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 81.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 81.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 81.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 81.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 81.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 80.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 80.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 80.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 80.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 80.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 80.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 80.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 79.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 79.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 79.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 79.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 79.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 79.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 78.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 78.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 78.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 78.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 77.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 77.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 77.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 77.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 76.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 76.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 76.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 76.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 76.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 75.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 75.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 75.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 74.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 73.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 73.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 73.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 73.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 73.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 72.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 72.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 72.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 72.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 72.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 71.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 71.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 71.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 71.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 71.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 71.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 71.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 71.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 70.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 70.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 69.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 69.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 69.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 69.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 69.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 68.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 67.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 67.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 67.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 67.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 67.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 67.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 67.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 67.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 66.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 66.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 66.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 66.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 65.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 65.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 65.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 65.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 64.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 64.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 64.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 63.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 63.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 63.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 63.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 62.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 62.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 62.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 62.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 61.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 61.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 61.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 61.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 60.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 60.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 60.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 60.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 59.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 59.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 59.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 59.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 59.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 59.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 59.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 58.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 58.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 58.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 57.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 57.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 57.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 57.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 57.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 57.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 57.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 56.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 56.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 56.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 56.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 56.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 55.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 55.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 55.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 55.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 54.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 53.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 53.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 53.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 53.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 53.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 52.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 51.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 50.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 49.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 49.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 49.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 48.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 48.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 47.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 46.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 45.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 45.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 44.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 42.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 63.6
Samples: 4

Max nTPM: 81.3
Min nTPM: 53.0
Sample A Female 81.3
Sample B Female 62.5
Sample C Male 57.5
Sample D Male 53.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

156.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 157.0
Samples: 4

Max nTPM: 165.7
Min nTPM: 151.4
Sample A Male 155.9
Sample B Male 165.7
Sample C Female 154.9
Sample D Female 151.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.1
68080680 Antisense, RP_040929_01_D10, Mouse strain C57BL/6J (56 days, male) 10.1

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