HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:312.2 nTPM
HPA Brain:326.6 nTPM
GTEx:312.2 nTPM
FANTOM5:202.1 Scaled Tags Per Million
Pig:321.5 nTPM
Mouse:335.2 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB008713Antibody CAB080246
Glial cells LowMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 326.6
Sample id Sample description nTPM
Hippocampus
nTPM: 284.5
1898 Male, age 80, left hemisphere 394.5
2621 Female, age 67, right hemisphere 290.3
2529 Female, age 94, left hemisphere 271.4
2148 Female, age 91, left hemisphere 265.5
1855 Male, age 76, left hemisphere 247.8
1911 Female, age 85, right hemisphere 237.6
Dentate gyrus
nTPM: 288.5
1927 Female, age 91, both hemispheres 339.8
2010 Male, age 76, both hemispheres 310.1
2530 Female, age 94, left hemisphere 309.5
2528 Male, age 74, both hemispheres 305.2
2246 Female, age 85, both hemispheres 266.7
2531 Female, age 67, both hemispheres 199.8
Entorhinal gyrus
nTPM: 262.7
2764 Male, age 80, right hemisphere 320.7
1938 Female, age 85, left hemisphere 300.2
1787 Male, age 76, left hemisphere 268.9
2117 Female, age 91, right hemisphere 255.2
2613 Female, age 94, left hemisphere 235.1
2686 Male, age 75, right hemisphere 195.9
Hippocampus, CA1
nTPM: 326.6
2749 Male, age 80, left hemisphere 502.6
2527 Male, age 74, both hemispheres 328.0
1873 Female, age 85, both hemispheres 318.2
2082 Female, age 91, right hemisphere 259.3
2045 Male, age 76, both hemispheres 224.9
Hippocampus, CA2
nTPM: 308.5
1963 Male, age 80, left hemisphere 380.0
2249 Male, age 74, both hemispheres 364.4
1892 Male, age 76, both hemispheres 347.9
2437 Female, age 94, left hemisphere 290.2
2113 Female, age 91, right hemisphere 241.7
1940 Female, age 85, left hemisphere 226.7
Hippocampus, CA3
nTPM: 282.9
2436 Male, age 74, both hemispheres 374.6
2137 Male, age 80, left hemisphere 319.2
1867 Male, age 76, both hemispheres 290.0
2620 Female, age 94, left hemisphere 279.8
1891 Female, age 85, both hemispheres 227.9
2861 Female, age 67, both hemispheres 205.7
Parahippocampal cortex
nTPM: 271.5
2250 Female, age 67, right hemisphere 315.4
1990 Female, age 91, right hemisphere 313.7
1850 Male, age 80, both hemispheres 309.8
1933 Female, age 85, both hemispheres 309.8
2245 Female, age 91, both hemispheres 299.3
2532 Female, age 72, left hemisphere 246.0
2622 Female, age 67, right hemisphere 241.6
2693 Female, age 94, both hemispheres 234.2
2692 Male, age 74, both hemispheres 224.4
2018 Male, age 76, both hemispheres 220.6
Perirhinal gyrus
nTPM: 315.4
1847 Female, age 91, left hemisphere 418.0
1794 Male, age 80, right hemisphere 370.1
1841 Female, age 85, right hemisphere 280.2
2521 Female, age 94, right hemisphere 274.4
2848 Male, age 76, right hemisphere 234.3
Subiculum
nTPM: 263.8
2438 Female, age 94, left hemisphere 296.1
1977 Female, age 85, both hemispheres 295.2
2619 Male, age 74, both hemispheres 283.3
1901 Male, age 80, both hemispheres 281.8
2729 Female, age 91, right hemisphere 245.4
2042 Male, age 76, both hemispheres 181.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 312.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 312.2
Samples: 255

Max nTPM: 581.5
Min nTPM: 126.5
Std nTPM: 95.1
Median nTPM: 300.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 581.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 574.9
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 569.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 557.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 546.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 526.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 512.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 511.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 509.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 509.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 498.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 202.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 202.1
FF:10169-103B7 60 years, female 236.7
FF:10153-102I9 76 years, female 167.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 321.5
Pig sample Sample description nTPM
Subiculum
nTPM: 287.0
Samples: 4

Max nTPM: 376.5
Min nTPM: 251.0
Sample A Female 376.5
Sample B Female 267.1
Sample C Male 253.4
Sample D Male 251.0
Dorsal hippocampus
nTPM: 321.5
Samples: 4

Max nTPM: 433.4
Min nTPM: 254.1
Sample A Female 433.4
Sample B Female 294.8
Sample C Male 303.7
Sample D Male 254.1
Entorhinal cortex
nTPM: 284.4
Samples: 4

Max nTPM: 329.0
Min nTPM: 238.3
Sample A Female 297.5
Sample B Female 329.0
Sample C Male 272.8
Sample D Male 238.3
Ventral hippocampus
nTPM: 306.4
Samples: 4

Max nTPM: 399.1
Min nTPM: 222.8
Sample A Female 339.0
Sample B Female 222.8
Sample C Male 399.1
Sample D Male 264.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 335.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 325.6
Samples: 4

Max nTPM: 349.6
Min nTPM: 307.0
Sample A Male 307.0
Sample B Male 325.5
Sample C Female 349.6
Sample D Female 320.1
Hippocampal formation
nTPM: 335.2
Samples: 4

Max nTPM: 382.7
Min nTPM: 302.2
Sample A Male 382.7
Sample B Male 302.2
Sample C Female 322.7
Sample D Female 333.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
75233570 Antisense, RP_051121_03_C01, Mouse strain C57BL/6J (56 days, male) 0.6

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo