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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:68.2 nTPM
HPA Brain:183.0 nTPM
GTEx:68.2 nTPM
FANTOM5:262.7 Scaled Tags Per Million
Pig:132.4 nTPM
Mouse:366.9 nTPM
Allen mouse:12.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029159Antibody HPA029160Antibody CAB000108Antibody CAB001950
Glial cells LowNot detectedNot detectedLow
Neuronal cells MediumLowNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

183.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 168.7
2288 Male, age 75, left hemisphere 190.4
2481 Female, age 94, left hemisphere 176.7
1857 Female, age 85, left hemisphere 170.0
2290 Female, age 72, unknown 167.0
1781 Male, age 74, unknown 163.5
2846 Female, age 79, unknown 162.1
1854 Male, age 80, left hemisphere 162.0
2289 Male, age 61, right hemisphere 158.1
Globus pallidus, externus
nTPM: 178.7
2395 Male, age 75, both hemispheres 217.2
1996 Male, age 80, right hemisphere 207.7
2772 Female, age 79, unknown 197.0
2646 Male, age 61, right hemisphere 154.3
2567 Female, age 72, unknown 117.5
Globus pallidus, internus
nTPM: 176.5
2483 Female, age 94, right hemisphere 217.2
2287 Male, age 75, right hemisphere 207.4
2778 Female, age 91, both hemispheres 175.4
2037 Male, age 80, right hemisphere 169.9
1818 Male, age 74, unknown 169.3
2111 Female, age 85, right hemisphere 163.1
2566 Female, age 72, unknown 132.8
Nucleus accumbens
nTPM: 165.6
2286 Male, age 75, left hemisphere 196.0
2391 Female, age 94, left hemisphere 173.0
1856 Female, age 91, right hemisphere 171.7
2732 Male, age 80, right hemisphere 167.9
2698 Female, age 72, unknown 165.5
1783 Male, age 74, unknown 162.0
1806 Female, age 85, left hemisphere 155.9
2824 Male, age 61, right hemisphere 132.6
Nucleus basalis of Meynert
nTPM: 161.5
2821 Male, age 75, both hemispheres 181.3
2569 Male, age 61, both hemispheres 165.3
2484 Female, age 94, left hemisphere 157.6
2393 Male, age 80, right hemisphere 141.9
Nucleus of the diagonal band
nTPM: 171.9
1812 Female, age 91, both hemispheres 191.3
1979 Male, age 74, unknown 186.9
2195 Female, age 85, both hemispheres 176.5
2775 Male, age 80, right hemisphere 163.0
2029 Male, age 61, right hemisphere 141.9
Putamen
nTPM: 152.3
2482 Female, age 94, left hemisphere 180.0
1937 Female, age 91, right hemisphere 150.6
2466 Female, age 79, unknown 149.4
1838 Male, age 80, right hemisphere 148.1
1829 Male, age 74, unknown 147.6
2489 Female, age 72, unknown 145.9
2647 Male, age 75, left hemisphere 144.6
Septal nuclei
nTPM: 183.0
2031 Female, age 72, unknown 203.9
2199 Male, age 80, right hemisphere 194.7
1960 Male, age 74, unknown 189.3
2629 Female, age 94, right hemisphere 176.8
2009 Female, age 91, both hemispheres 176.6
2059 Female, age 85, both hemispheres 172.5
2394 Male, age 61, left hemisphere 167.1
Stria terminalis, bed nucleus
nTPM: 164.5
1974 Female, age 91, both hemispheres 169.6
2201 Male, age 74, unknown 166.9
2486 Female, age 94, both hemispheres 156.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 68.2
Samples: 246

Max nTPM: 106.3
Min nTPM: 43.3
Std nTPM: 12.0
Median nTPM: 65.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 106.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 106.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 105.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 98.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 97.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 92.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 92.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 92.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 91.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 91.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 90.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 90.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 89.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 89.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 88.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 88.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 88.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 87.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 87.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 87.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 86.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 86.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 85.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 85.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 85.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 85.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 84.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 84.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 84.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 84.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 84.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 83.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 83.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 83.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 82.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 82.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 82.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 82.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 81.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 81.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 81.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 80.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 80.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 80.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 80.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 80.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 80.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 80.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 80.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 79.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 79.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 78.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 78.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 78.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 78.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 77.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 77.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 77.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 77.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 77.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 77.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 76.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 75.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 75.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 75.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 75.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 75.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 74.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 74.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 74.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 73.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 73.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 73.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 72.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 72.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 72.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 72.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 72.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 72.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 72.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 72.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 72.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 71.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 71.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 71.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 71.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 70.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 70.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 70.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 70.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 70.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 69.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 69.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 69.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 69.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 69.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 69.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 69.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 69.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 69.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 69.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 68.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 68.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 68.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 67.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 67.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 67.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 67.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 67.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 67.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 66.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 66.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 66.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 66.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 66.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 66.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 66.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 66.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 66.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 65.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 65.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 65.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 65.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 65.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 65.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 65.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 65.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 65.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 65.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 64.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 64.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 64.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 64.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 64.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 64.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 64.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 63.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 63.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 63.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 63.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 63.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 63.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 63.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 63.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 62.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 62.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 62.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 62.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 62.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 62.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 62.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 62.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 62.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 62.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 62.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 62.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 62.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 62.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 61.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 61.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 61.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 61.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 61.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 61.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 60.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 60.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 60.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 60.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 60.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 60.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 60.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 60.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 60.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 60.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 59.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 59.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 59.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 59.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 59.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 59.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 59.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 59.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 59.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 58.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 58.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 58.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 58.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 58.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 58.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 58.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 58.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 58.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 57.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 57.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 57.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 57.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 57.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 57.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 57.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 57.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 56.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 56.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 56.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 56.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 56.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 56.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 55.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 55.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 55.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 55.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 55.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 55.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 54.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 54.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 54.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 54.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 54.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 53.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 53.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 53.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 53.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 53.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 52.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 52.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 52.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 52.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 52.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 52.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 51.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 50.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 50.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 50.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 49.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 49.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 48.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 47.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 44.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 43.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 43.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 67.1
Samples: 246

Max nTPM: 149.1
Min nTPM: 35.8
Std nTPM: 12.7
Median nTPM: 65.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 149.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 128.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 112.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 100.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 97.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 92.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 88.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 88.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 86.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 86.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 86.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 85.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 85.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 85.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 84.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 83.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 83.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 83.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 82.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 82.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 82.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 82.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 81.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 81.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 81.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 81.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 81.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 81.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 81.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 80.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 80.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 79.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 79.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 79.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 78.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 78.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 78.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 78.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 78.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 78.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 77.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 77.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 77.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 77.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 77.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 76.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 76.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 75.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 75.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 75.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 75.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 75.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 74.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 74.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 74.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 73.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 72.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 72.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 72.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 72.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 72.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 72.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 72.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 72.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 72.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 72.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 72.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 72.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 72.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 72.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 72.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 71.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 71.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 71.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 71.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 71.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 71.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 71.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 71.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 70.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 70.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 70.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 70.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 69.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 69.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 69.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 69.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 69.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 69.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 69.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 69.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 69.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 69.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 69.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 68.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 68.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 68.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 68.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 68.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 68.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 68.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 68.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 68.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 68.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 68.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 68.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 68.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 67.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 67.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 67.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 67.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 67.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 66.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 66.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 66.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 66.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 66.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 66.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 66.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 66.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 66.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 66.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 65.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 65.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 65.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 65.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 65.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 65.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 65.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 64.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 64.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 64.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 64.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 64.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 64.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 64.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 64.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 64.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 64.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 64.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 64.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 64.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 64.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 64.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 64.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 64.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 64.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 64.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 64.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 63.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 63.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 63.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 63.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 63.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 63.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 63.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 63.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 63.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 63.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 63.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 62.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 62.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 62.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 62.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 62.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 62.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 62.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 62.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 62.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 61.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 61.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 61.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 61.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 61.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 61.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 61.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 60.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 60.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 60.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 60.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 60.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 59.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 59.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 59.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 59.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 59.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 59.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 59.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 59.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 58.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 58.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 58.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 58.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 58.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 58.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 57.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 57.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 57.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 57.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 57.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 57.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 57.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 57.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 56.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 56.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 56.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 56.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 56.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 56.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 56.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 56.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 56.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 55.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 55.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 55.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 55.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 54.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 54.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 54.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 54.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 53.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 52.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 52.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 52.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 51.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 51.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 50.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 50.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 50.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 49.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 49.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 49.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 48.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 48.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 47.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 47.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 47.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 46.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 46.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 46.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 45.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 43.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 43.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 37.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 35.8
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Brain - Putamen (basal ganglia)
Average nTPM: 68.0
Samples: 205

Max nTPM: 149.0
Min nTPM: 37.2
Std nTPM: 14.1
Median nTPM: 66.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 149.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 109.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 103.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 102.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 98.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 97.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 96.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 95.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 95.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 92.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 92.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 92.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 91.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 91.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 91.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 90.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 89.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 89.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 88.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 87.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 86.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 86.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 85.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 84.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 84.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 83.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 82.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 82.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 82.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 81.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 81.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 80.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 80.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 79.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 79.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 79.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 79.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 78.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 78.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 77.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 77.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 77.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 77.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 77.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 76.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 76.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 76.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 76.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 75.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 75.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 75.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 75.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 75.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 74.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 74.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 74.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 74.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 74.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 74.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 73.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 73.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 73.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 73.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 73.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 73.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 73.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 73.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 73.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 72.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 72.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 72.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 71.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 71.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 71.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 71.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 70.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 70.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 70.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 70.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 70.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 70.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 70.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 69.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 69.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 69.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 69.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 69.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 68.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 68.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 68.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 68.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 68.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 68.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 67.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 67.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 67.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 66.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 66.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 66.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 66.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 66.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 66.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 66.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 65.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 65.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 65.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 64.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 64.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 64.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 64.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 64.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 64.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 64.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 63.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 63.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 63.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 63.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 63.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 62.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 62.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 62.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 62.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 62.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 62.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 62.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 62.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 62.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 62.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 61.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 61.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 61.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 61.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 61.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 61.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 61.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 61.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 61.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 61.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 61.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 61.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 60.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 60.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 60.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 59.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 59.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 59.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 58.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 58.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 58.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 58.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 58.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 58.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 58.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 58.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 58.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 57.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 57.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 57.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 57.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 57.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 57.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 57.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 57.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 57.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 56.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 56.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 56.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 56.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 56.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 56.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 55.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 55.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 54.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 54.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 54.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 54.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 54.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 54.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 54.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 53.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 53.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 53.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 53.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 53.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 52.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 52.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 51.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 51.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 51.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 51.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 50.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 50.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 50.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 50.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 50.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 50.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 47.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 45.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 44.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 44.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 43.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 41.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 40.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 37.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

262.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 213.2
FF:10164-103B2 76 years, female 213.2
Nucleus accumbens
Scaled Tags Per Million: 262.7
FF:10037-101F1 23-56 years, mixed 262.7
Putamen
Scaled Tags Per Million: 220.7
FF:10176-103C5 60 years, female 220.7
Globus pallidus
Scaled Tags Per Million: 226.1
FF:10175-103C4 60 years, female 237.7
FF:10161-103A8 76 years, female 214.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.4
Pig sample Sample description nTPM
Caudate
nTPM: 103.1
Samples: 4

Max nTPM: 109.6
Min nTPM: 91.1
Sample A Female 109.6
Sample B Female 106.0
Sample C Male 105.7
Sample D Male 91.1
Putamen
nTPM: 119.0
Samples: 4

Max nTPM: 142.5
Min nTPM: 91.1
Sample A Female 137.8
Sample B Female 91.1
Sample C Male 142.5
Sample D Male 104.7
Septum
nTPM: 132.4
Samples: 4

Max nTPM: 147.8
Min nTPM: 117.7
Sample A Female 137.6
Sample B Female 117.7
Sample C Male 147.8
Sample D Male 126.6
Ventral pallidum
nTPM: 116.8
Samples: 4

Max nTPM: 129.6
Min nTPM: 103.7
Sample A Female 103.7
Sample B Female 124.5
Sample C Male 129.6
Sample D Male 109.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

366.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 307.5
Samples: 4

Max nTPM: 334.9
Min nTPM: 284.9
Sample A Male 305.5
Sample B Male 284.9
Sample C Female 304.6
Sample D Female 334.9
Septum
nTPM: 366.9
Samples: 4

Max nTPM: 381.1
Min nTPM: 348.9
Sample A Male 348.9
Sample B Male 381.1
Sample C Female 373.6
Sample D Female 363.9
Ventral forebrain
nTPM: 326.3
Samples: 4

Max nTPM: 339.0
Min nTPM: 315.6
Sample A Male 315.6
Sample B Male 329.1
Sample C Female 321.5
Sample D Female 339.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.3
79591729 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 17.4
79904258 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 10.1
197 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 7.2
196 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 5.2
Pallidum
Expression energy: 11.1
79591729 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 14.9
79904258 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 8.4
197 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 7.2
196 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 5.6

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