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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:42.2 nTPM
HPA Brain:84.0 nTPM
GTEx:42.2 nTPM
FANTOM5:107.7 Scaled Tags Per Million
Pig:34.9 nTPM
Mouse:55.9 nTPM
Allen mouse:0.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA004689Antibody HPA008285
Glial cells Not detectedNot detected
Neuronal cells LowLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 53.8
2288 Male, age 75, left hemisphere 61.4
1854 Male, age 80, left hemisphere 56.8
2289 Male, age 61, right hemisphere 55.6
2846 Female, age 79, unknown 53.8
1857 Female, age 85, left hemisphere 52.4
1781 Male, age 74, unknown 50.3
2481 Female, age 94, left hemisphere 50.3
2290 Female, age 72, unknown 49.7
Globus pallidus, externus
nTPM: 84.0
2567 Female, age 72, unknown 104.1
2646 Male, age 61, right hemisphere 87.4
1996 Male, age 80, right hemisphere 85.3
2772 Female, age 79, unknown 73.0
2395 Male, age 75, both hemispheres 70.3
Globus pallidus, internus
nTPM: 80.9
2111 Female, age 85, right hemisphere 106.0
2566 Female, age 72, unknown 100.7
2778 Female, age 91, both hemispheres 77.8
2037 Male, age 80, right hemisphere 75.3
1818 Male, age 74, unknown 74.3
2287 Male, age 75, right hemisphere 71.7
2483 Female, age 94, right hemisphere 60.3
Nucleus accumbens
nTPM: 59.1
2698 Female, age 72, unknown 66.4
2732 Male, age 80, right hemisphere 64.8
2286 Male, age 75, left hemisphere 60.0
1806 Female, age 85, left hemisphere 59.4
1783 Male, age 74, unknown 58.3
2391 Female, age 94, left hemisphere 57.1
2824 Male, age 61, right hemisphere 57.0
1856 Female, age 91, right hemisphere 50.2
Nucleus basalis of Meynert
nTPM: 64.4
2569 Male, age 61, both hemispheres 90.8
2821 Male, age 75, both hemispheres 59.3
2393 Male, age 80, right hemisphere 55.4
2484 Female, age 94, left hemisphere 52.2
Nucleus of the diagonal band
nTPM: 49.5
2029 Male, age 61, right hemisphere 59.5
2195 Female, age 85, both hemispheres 48.9
1979 Male, age 74, unknown 47.4
2775 Male, age 80, right hemisphere 47.0
1812 Female, age 91, both hemispheres 44.5
Putamen
nTPM: 59.5
2647 Male, age 75, left hemisphere 79.9
1829 Male, age 74, unknown 66.2
2489 Female, age 72, unknown 65.5
2482 Female, age 94, left hemisphere 56.5
1937 Female, age 91, right hemisphere 52.7
2466 Female, age 79, unknown 49.7
1838 Male, age 80, right hemisphere 45.9
Septal nuclei
nTPM: 52.7
2394 Male, age 61, left hemisphere 66.1
2059 Female, age 85, both hemispheres 55.6
2629 Female, age 94, right hemisphere 54.6
2199 Male, age 80, right hemisphere 52.9
1960 Male, age 74, unknown 49.3
2031 Female, age 72, unknown 47.2
2009 Female, age 91, both hemispheres 43.6
Stria terminalis, bed nucleus
nTPM: 53.4
2201 Male, age 74, unknown 54.2
2486 Female, age 94, both hemispheres 53.2
1974 Female, age 91, both hemispheres 52.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 35.9
Samples: 246

Max nTPM: 83.9
Min nTPM: 13.1
Std nTPM: 9.7
Median nTPM: 34.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 83.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 66.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 65.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 61.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 61.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 59.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 57.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 56.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 55.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 55.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 55.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 54.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 54.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 54.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 53.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 53.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 53.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 51.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 50.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 50.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 50.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 50.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 49.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 49.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 49.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 49.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 49.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 49.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 48.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 47.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 47.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 47.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 46.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 46.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 45.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 45.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 45.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 45.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 45.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 45.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 44.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 44.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 44.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 44.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 44.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 44.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 44.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 43.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 43.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 43.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 43.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 42.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 42.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 42.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 42.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 42.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 42.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 41.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 41.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 41.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 40.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 40.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 40.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 40.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 39.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 39.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 39.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 39.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 39.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 39.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 39.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 39.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 39.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 39.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 39.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 39.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 39.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 39.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 39.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 38.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 38.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 38.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 38.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 38.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 38.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 38.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 38.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 38.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 37.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 37.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 37.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 37.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 37.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 37.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 37.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 37.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 37.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 37.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 37.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 36.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 36.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 36.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 36.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 36.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 36.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 36.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 36.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 36.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 36.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 36.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 36.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 35.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 35.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 35.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 35.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 35.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 35.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 34.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 34.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 34.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 34.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 34.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 34.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 34.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 34.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 34.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 34.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 33.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 33.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 33.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 33.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 33.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 33.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 33.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 33.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 33.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 33.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 33.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 33.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 33.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 32.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 32.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 32.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 32.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 32.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 32.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 31.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 31.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 31.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 31.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 31.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 31.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 31.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 31.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 31.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 31.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 31.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 31.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 31.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 31.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 31.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 31.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 30.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 30.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 30.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 30.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 30.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 30.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 30.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 30.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 30.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 30.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 30.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 30.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 30.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 30.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 30.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 30.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 29.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 29.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 29.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 29.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 29.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 28.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 28.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 28.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 28.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 28.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 28.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 28.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 28.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 28.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 28.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 28.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 27.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 27.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 27.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 27.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 27.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 27.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 27.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 27.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 26.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 26.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 26.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 26.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 26.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 26.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 26.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 26.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 26.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 26.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 25.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 25.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 25.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 25.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 25.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 25.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 25.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 25.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 25.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 24.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 24.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 24.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 24.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 24.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 24.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 24.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 24.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 24.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 24.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 24.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 22.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 22.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 22.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 22.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 22.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 21.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 21.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 21.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 20.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 19.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 19.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 19.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 13.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 32.5
Samples: 246

Max nTPM: 64.7
Min nTPM: 17.0
Std nTPM: 7.0
Median nTPM: 31.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 64.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 58.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 56.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 53.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 53.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 52.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 52.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 51.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 50.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 50.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 46.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 46.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 44.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 43.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 43.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 43.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 43.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 42.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 41.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 41.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 41.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 41.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 41.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 41.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 41.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 40.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 40.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 40.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 40.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 39.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 39.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 39.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 38.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 38.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 38.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 38.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 38.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 38.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 38.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 37.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 37.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 37.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 37.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 37.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 37.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 37.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 36.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 36.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 36.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 36.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 36.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 36.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 36.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 36.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 36.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 36.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 36.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 36.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 36.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 35.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 35.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 35.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 35.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 35.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 35.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 35.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 35.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 34.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 34.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 34.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 34.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 34.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 34.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 34.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 34.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 34.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 34.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 34.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 34.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 34.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 34.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 34.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 33.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 33.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 33.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 33.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 33.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 33.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 33.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 33.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 33.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 33.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 33.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 33.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 33.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 33.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 33.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 33.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 33.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 32.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 32.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 32.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 32.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 32.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 32.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 32.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 32.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 32.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 32.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 32.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 32.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 32.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 32.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 32.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 32.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 32.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 31.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 31.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 31.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 31.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 31.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 31.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 31.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 31.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 31.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 31.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 31.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 31.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 31.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 31.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 31.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 31.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 31.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 31.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 31.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 31.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 31.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 30.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 30.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 30.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 30.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 30.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 30.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 30.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 30.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 30.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 30.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 30.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 30.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 30.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 30.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 30.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 30.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 30.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 30.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 30.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 30.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 29.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 29.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 29.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 29.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 29.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 29.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 29.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 29.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 29.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 29.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 29.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 29.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 28.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 28.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 28.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 28.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 28.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 28.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 28.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 28.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 28.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 28.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 28.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 28.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 28.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 28.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 28.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 28.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 27.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 27.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 27.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 27.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 27.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 27.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 27.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 26.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 26.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 26.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 26.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 26.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 26.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 26.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 26.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 26.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 26.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 26.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 26.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 26.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 26.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 26.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 25.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 25.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 25.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 25.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 25.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 25.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 25.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 25.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 25.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 25.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 25.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 25.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 25.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 24.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 24.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 24.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 24.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 24.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 24.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 24.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 24.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 24.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 24.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 24.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 24.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 24.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 23.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 23.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 23.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 23.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 23.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 22.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 22.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 21.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 21.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 20.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 20.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 17.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 17.0
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Brain - Putamen (basal ganglia)
Average nTPM: 42.2
Samples: 205

Max nTPM: 92.4
Min nTPM: 20.1
Std nTPM: 11.6
Median nTPM: 40.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 92.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 76.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 74.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 74.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 73.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 70.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 67.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 67.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 64.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 64.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 64.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 64.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 63.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 62.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 61.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 61.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 60.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 58.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 58.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 57.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 57.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 57.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 57.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 56.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 56.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 56.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 56.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 55.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 54.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 53.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 53.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 53.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 53.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 53.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 52.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 52.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 52.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 51.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 51.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 51.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 51.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 50.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 50.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 50.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 50.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 50.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 49.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 49.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 49.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 48.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 48.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 48.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 48.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 48.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 47.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 47.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 46.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 46.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 46.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 46.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 46.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 46.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 45.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 45.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 45.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 45.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 45.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 45.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 45.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 44.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 44.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 44.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 44.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 44.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 43.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 43.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 43.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 43.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 43.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 43.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 43.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 43.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 42.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 42.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 42.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 42.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 42.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 42.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 42.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 42.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 42.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 42.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 41.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 41.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 41.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 41.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 41.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 41.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 41.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 40.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 40.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 40.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 40.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 40.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 40.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 39.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 39.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 39.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 39.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 39.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 39.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 39.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 39.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 39.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 39.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 39.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 38.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 38.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 38.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 38.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 38.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 37.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 37.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 37.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 37.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 37.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 37.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 37.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 37.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 36.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 36.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 36.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 36.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 36.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 36.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 36.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 36.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 36.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 35.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 35.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 35.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 35.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 35.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 35.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 35.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 35.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 35.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 35.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 34.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 34.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 34.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 34.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 33.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 33.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 33.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 33.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 33.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 33.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 33.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 33.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 33.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 33.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 33.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 32.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 32.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 32.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 31.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 31.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 31.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 31.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 31.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 31.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 31.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 30.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 30.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 30.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 30.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 30.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 30.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 29.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 29.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 29.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 29.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 29.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 29.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 28.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 28.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 28.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 27.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 27.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 27.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 27.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 27.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 27.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 26.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 26.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 26.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 26.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 25.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 25.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 25.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 25.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 22.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 20.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 20.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

107.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 65.2
FF:10164-103B2 76 years, female 65.2
Nucleus accumbens
Scaled Tags Per Million: 107.7
FF:10037-101F1 23-56 years, mixed 107.7
Putamen
Scaled Tags Per Million: 68.5
FF:10176-103C5 60 years, female 68.5
Globus pallidus
Scaled Tags Per Million: 83.5
FF:10161-103A8 76 years, female 97.9
FF:10175-103C4 60 years, female 69.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.9
Pig sample Sample description nTPM
Caudate
nTPM: 33.2
Samples: 4

Max nTPM: 37.4
Min nTPM: 30.4
Sample A Female 31.6
Sample B Female 33.5
Sample C Male 37.4
Sample D Male 30.4
Putamen
nTPM: 33.5
Samples: 4

Max nTPM: 37.2
Min nTPM: 27.3
Sample A Female 36.6
Sample B Female 27.3
Sample C Male 33.0
Sample D Male 37.2
Septum
nTPM: 34.9
Samples: 4

Max nTPM: 38.5
Min nTPM: 31.8
Sample A Female 38.5
Sample B Female 31.8
Sample C Male 36.5
Sample D Male 32.8
Ventral pallidum
nTPM: 33.2
Samples: 4

Max nTPM: 37.6
Min nTPM: 29.7
Sample A Female 29.8
Sample B Female 29.7
Sample C Male 37.6
Sample D Male 35.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 45.6
Samples: 4

Max nTPM: 48.5
Min nTPM: 43.2
Sample A Male 43.2
Sample B Male 43.8
Sample C Female 46.9
Sample D Female 48.5
Septum
nTPM: 55.9
Samples: 4

Max nTPM: 58.5
Min nTPM: 53.3
Sample A Male 56.0
Sample B Male 58.5
Sample C Female 53.3
Sample D Female 55.7
Ventral forebrain
nTPM: 48.2
Samples: 4

Max nTPM: 51.0
Min nTPM: 46.6
Sample A Male 46.8
Sample B Male 48.4
Sample C Female 46.6
Sample D Female 51.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.7
69526797 Antisense, RP_050421_01_F08, Mouse strain C57BL/6J (56 days, male) 0.7
Pallidum
Expression energy: 0.6
69526797 Antisense, RP_050421_01_F08, Mouse strain C57BL/6J (56 days, male) 0.6

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