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ARHGAP1
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  • ARHGAP1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

118.317
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:31.7 nTPM
HPA Brain:68.5 nTPM
GTEx:31.7 nTPM
Pig:40.2 nTPM
Mouse:48.5 nTPM
Allen mouse:0.6 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA004689
Hypothalamus mean intensity 118.317
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus 118.317
Mammillary nucleus 46.728
Periventricular hypothalamic nucleus 102.610
Supraoptic nucleus 96.968
Tuberal nucleus -
Ventral tuberomammillary nucleus 37.761
Lateral preoptic area 56.430
Medial preoptic area 47.735
Suprachiasmatic nucleus 111.734
Paraventricular hypothalamic nucleus 69.012
Anterior hypothalamic area, central 75.762
Ventral medial hypothalamic nucleus -
Ventral medial hypothalamic nucleus* -
Arcuate nucleus -
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 62.190
Dorsal medial hypothalamic nucleus -
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 48.8
1961 Female, age 42, unknown 52.4
2226 Male, age 75, left hemisphere 45.1
Dorsomedial nucleus
nTPM: 50.5
2017 Female, age 42, unknown 57.0
2041 Female, age 72, unknown 47.4
1989 Male, age 62, unknown 47.0
Lateral hypothalamic area
nTPM: 52.7
2271 Male, age 75, both hemispheres 58.9
1791 Male, age 80, right hemisphere 54.7
2412 Male, age 62, unknown 52.8
2228 Male, age 66, unknown 44.6
Mammillary body
nTPM: 56.2
1834 Female, age 42, unknown 62.6
1948 Female, age 72, unknown 58.9
1945 Male, age 80, right hemisphere 58.4
2413 Male, age 66, unknown 53.6
1923 Female, age 72, unknown 47.6
Paraventricular nucleus
nTPM: 68.5
2700 Male, age 62, unknown 68.5
Preoptic area
nTPM: 55.7
2414 Female, age 72, unknown 70.2
1861 Female, age 42, unknown 56.7
1907 Male, age 80, right hemisphere 40.2
Supraoptic nucleus
nTPM: 53.3
2043 Male, age 62, unknown 56.8
2835 Female, age 72, unknown 56.2
1894 Female, age 72, unknown 46.9
Ventromedial nucleus
nTPM: 52.8
1982 Female, age 72, unknown 54.0
1822 Female, age 42, unknown 51.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 31.7
Samples: 202

Max nTPM: 85.2
Min nTPM: 8.5
Std nTPM: 8.9
Median nTPM: 30.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 85.2
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 62.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 58.6
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 58.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 56.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 52.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 50.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 48.8
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 48.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 45.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 45.3
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 45.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 45.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 44.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 43.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 43.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 43.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 42.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 42.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 42.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 41.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 41.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 41.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 41.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 41.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 41.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 40.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 40.6
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 40.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 40.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 40.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 40.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 40.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 39.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 39.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 38.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 38.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 38.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 37.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 37.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 37.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 37.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 37.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 37.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 36.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 36.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 36.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 36.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 36.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 36.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 35.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 35.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 35.7
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 35.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 35.2
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 35.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 34.9
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 34.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 34.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 33.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 33.8
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 33.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 33.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 33.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 33.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 33.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 33.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 33.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 33.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 33.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 33.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 33.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 32.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 32.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 32.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 32.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 32.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 32.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 32.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 32.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 32.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 32.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 32.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 32.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 32.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 32.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 32.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 31.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 31.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 31.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 31.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 31.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 31.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 31.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 30.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 30.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 30.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 30.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 30.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 30.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 30.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 30.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 30.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 30.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 30.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 30.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 30.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 29.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 29.6
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 29.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 29.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 29.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 29.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 29.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 29.1
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 29.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 29.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 28.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 28.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 28.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 28.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 28.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 28.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 28.7
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 28.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 28.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 28.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 28.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 28.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 28.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 28.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 27.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 27.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 27.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 27.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 27.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 27.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 27.5
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 27.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 27.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 27.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 26.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 26.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 26.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 26.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 26.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 26.2
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 26.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 26.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 25.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 25.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 25.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 25.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 25.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 25.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 25.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 25.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 25.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 25.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 25.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 24.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 24.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 24.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 24.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 24.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 24.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 24.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 24.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 24.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 24.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 24.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 23.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 23.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 23.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 23.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 23.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 23.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 23.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 23.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 23.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 23.0
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 22.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 22.9
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 22.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 22.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 22.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 22.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 22.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 21.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 21.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 21.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 20.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 20.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 19.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 19.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 19.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 18.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 17.8
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 17.2
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 15.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 14.7
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 8.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 40.2
Samples: 4

Max nTPM: 46.3
Min nTPM: 31.2
Sample A Female 43.9
Sample B Female 39.4
Sample C Male 46.3
Sample D Male 31.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 48.4
Samples: 4

Max nTPM: 50.3
Min nTPM: 46.5
Sample A Male 48.9
Sample B Male 48.0
Sample C Female 50.3
Sample D Female 46.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.6
69526797 Antisense, RP_050421_01_F08, Mouse strain C57BL/6J (56 days, male) 0.6

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