HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:3.9 nTPM
HPA Brain:19.1 nTPM
GTEx:3.9 nTPM
FANTOM5:1.9 Scaled Tags Per Million
Pig:18.5 nTPM
Mouse:19.9 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB009564
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 19.1
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
1855 Male, age 76, left hemisphere 26.7
1898 Male, age 80, left hemisphere 13.0
2148 Female, age 91, left hemisphere 12.9
2621 Female, age 67, right hemisphere 7.8
1911 Female, age 85, right hemisphere 7.2
2529 Female, age 94, left hemisphere 3.3
Dentate gyrus
nTPM: 14.9
2010 Male, age 76, both hemispheres 32.4
2531 Female, age 67, both hemispheres 18.5
1927 Female, age 91, both hemispheres 13.6
2246 Female, age 85, both hemispheres 11.4
2528 Male, age 74, both hemispheres 8.2
2530 Female, age 94, left hemisphere 5.5
Entorhinal gyrus
nTPM: 2.8
1938 Female, age 85, left hemisphere 3.2
2117 Female, age 91, right hemisphere 3.1
2686 Male, age 75, right hemisphere 2.9
2764 Male, age 80, right hemisphere 2.9
2613 Female, age 94, left hemisphere 2.5
1787 Male, age 76, left hemisphere 2.3
Hippocampus, CA1
nTPM: 19.1
2045 Male, age 76, both hemispheres 63.6
1873 Female, age 85, both hemispheres 14.0
2749 Male, age 80, left hemisphere 9.5
2527 Male, age 74, both hemispheres 4.4
2082 Female, age 91, right hemisphere 3.7
Hippocampus, CA2
nTPM: 8.9
1892 Male, age 76, both hemispheres 29.9
1963 Male, age 80, left hemisphere 8.4
2437 Female, age 94, left hemisphere 4.2
1940 Female, age 85, left hemisphere 3.8
2249 Male, age 74, both hemispheres 3.8
2113 Female, age 91, right hemisphere 3.6
Hippocampus, CA3
nTPM: 19.0
1867 Male, age 76, both hemispheres 53.8
2620 Female, age 94, left hemisphere 21.1
2861 Female, age 67, both hemispheres 14.2
2137 Male, age 80, left hemisphere 10.7
1891 Female, age 85, both hemispheres 9.4
2436 Male, age 74, both hemispheres 4.5
Parahippocampal cortex
nTPM: 4.0
2018 Male, age 76, both hemispheres 8.4
2532 Female, age 72, left hemisphere 4.6
2693 Female, age 94, both hemispheres 4.2
1933 Female, age 85, both hemispheres 4.0
2245 Female, age 91, both hemispheres 3.9
2250 Female, age 67, right hemisphere 3.9
1850 Male, age 80, both hemispheres 3.5
2622 Female, age 67, right hemisphere 3.2
2692 Male, age 74, both hemispheres 2.5
1990 Female, age 91, right hemisphere 2.4
Perirhinal gyrus
nTPM: 4.1
2521 Female, age 94, right hemisphere 5.4
1847 Female, age 91, left hemisphere 3.9
2848 Male, age 76, right hemisphere 3.8
1794 Male, age 80, right hemisphere 3.7
1841 Female, age 85, right hemisphere 3.4
Subiculum
nTPM: 5.5
2729 Female, age 91, right hemisphere 12.7
2042 Male, age 76, both hemispheres 6.9
1901 Male, age 80, both hemispheres 5.4
1977 Female, age 85, both hemispheres 3.3
2438 Female, age 94, left hemisphere 2.5
2619 Male, age 74, both hemispheres 2.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.9
Samples: 197

Max nTPM: 38.0
Min nTPM: 0.0
Std nTPM: 5.2
Median nTPM: 1.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 25.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 25.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 19.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 18.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 17.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 16.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 16.0
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 15.8
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 14.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 14.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.9
FF:10169-103B7 60 years, female 3.1
FF:10153-102I9 76 years, female 0.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 18.5
Pig sample Sample description nTPM
Subiculum
nTPM: 7.0
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.0
Sample A Female 8.7
Sample B Female 6.2
Sample C Male 6.9
Sample D Male 6.0
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 29.3
Min nTPM: 4.8
Sample A Female 22.0
Sample B Female 18.0
Sample C Male 4.8
Sample D Male 29.3
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 9.7
Min nTPM: 5.5
Sample A Female 9.7
Sample B Female 6.8
Sample C Male 5.5
Sample D Male 8.8
Ventral hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 17.5
Min nTPM: 11.5
Sample A Female 17.5
Sample B Female 16.0
Sample C Male 15.1
Sample D Male 11.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 19.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 14.5
Min nTPM: 11.1
Sample A Male 11.1
Sample B Male 14.5
Sample C Female 12.4
Sample D Female 11.9
Hippocampal formation
nTPM: 20.0
Samples: 4

Max nTPM: 23.4
Min nTPM: 16.8
Sample A Male 16.8
Sample B Male 20.6
Sample C Female 23.4
Sample D Female 19.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
75695642 Antisense, RP_060518_04_B05, Mouse strain C57BL/6J (56 days, male) 4.2
79587720 Antisense, RP_071204_02_D03, Mouse strain C57BL/6J (56 days, male) 3.8

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