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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:12.3 nTPM
HPA Brain:15.4 nTPM
GTEx:12.3 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:12.5 nTPM
Mouse:1.0 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018852Antibody CAB016722
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 12.0
2481 Female, age 94, left hemisphere 17.0
1854 Male, age 80, left hemisphere 15.7
2846 Female, age 79, unknown 11.8
1857 Female, age 85, left hemisphere 11.7
2289 Male, age 61, right hemisphere 11.4
1781 Male, age 74, unknown 11.1
2290 Female, age 72, unknown 10.8
2288 Male, age 75, left hemisphere 6.7
Globus pallidus, externus
nTPM: 13.1
1996 Male, age 80, right hemisphere 20.0
2772 Female, age 79, unknown 14.8
2395 Male, age 75, both hemispheres 12.4
2646 Male, age 61, right hemisphere 9.6
2567 Female, age 72, unknown 9.0
Globus pallidus, internus
nTPM: 12.6
2037 Male, age 80, right hemisphere 17.8
2483 Female, age 94, right hemisphere 17.3
1818 Male, age 74, unknown 12.9
2566 Female, age 72, unknown 12.2
2287 Male, age 75, right hemisphere 11.1
2778 Female, age 91, both hemispheres 9.6
2111 Female, age 85, right hemisphere 7.3
Nucleus accumbens
nTPM: 8.1
2732 Male, age 80, right hemisphere 10.7
2391 Female, age 94, left hemisphere 10.0
1856 Female, age 91, right hemisphere 9.5
2698 Female, age 72, unknown 9.0
1806 Female, age 85, left hemisphere 8.2
1783 Male, age 74, unknown 7.0
2286 Male, age 75, left hemisphere 7.0
2824 Male, age 61, right hemisphere 3.5
Nucleus basalis of Meynert
nTPM: 15.4
2393 Male, age 80, right hemisphere 19.3
2821 Male, age 75, both hemispheres 18.7
2484 Female, age 94, left hemisphere 12.5
2569 Male, age 61, both hemispheres 11.1
Nucleus of the diagonal band
nTPM: 8.9
1812 Female, age 91, both hemispheres 15.5
2775 Male, age 80, right hemisphere 9.1
1979 Male, age 74, unknown 7.0
2029 Male, age 61, right hemisphere 6.6
2195 Female, age 85, both hemispheres 6.2
Putamen
nTPM: 13.6
2482 Female, age 94, left hemisphere 24.7
2489 Female, age 72, unknown 18.7
1838 Male, age 80, right hemisphere 13.3
2466 Female, age 79, unknown 10.8
2647 Male, age 75, left hemisphere 9.4
1829 Male, age 74, unknown 9.3
1937 Female, age 91, right hemisphere 8.8
Septal nuclei
nTPM: 10.9
2199 Male, age 80, right hemisphere 15.8
2394 Male, age 61, left hemisphere 12.3
2009 Female, age 91, both hemispheres 11.3
2031 Female, age 72, unknown 10.5
2059 Female, age 85, both hemispheres 9.7
2629 Female, age 94, right hemisphere 9.7
1960 Male, age 74, unknown 7.0
Stria terminalis, bed nucleus
nTPM: 7.6
1974 Female, age 91, both hemispheres 9.8
2486 Female, age 94, both hemispheres 6.7
2201 Male, age 74, unknown 6.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 12.3
Samples: 246

Max nTPM: 71.7
Min nTPM: 1.8
Std nTPM: 9.6
Median nTPM: 9.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 71.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 65.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 59.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 54.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 41.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 40.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 36.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 36.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 35.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 34.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 30.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 28.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 28.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 28.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 27.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 26.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 24.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 24.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 23.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 23.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 22.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 21.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 21.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 21.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 21.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 20.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 20.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 20.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 20.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 20.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 20.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 20.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 20.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 19.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 19.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 18.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 18.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 17.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 17.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 16.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 16.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 16.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 16.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 15.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 15.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 15.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 15.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 14.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 14.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 14.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 14.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 14.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 14.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 14.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 14.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 14.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 14.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 13.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 13.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 13.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 13.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 13.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 13.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 13.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 13.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 13.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 12.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 12.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 12.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 12.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 12.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 12.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 12.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 12.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 12.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 11.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 11.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 11.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 11.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 11.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 11.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 11.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 11.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 11.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 11.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 11.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 11.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 11.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 11.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 11.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 10.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 10.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 10.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 10.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 10.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 10.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 10.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 10.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 10.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 10.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 10.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 10.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 10.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 10.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 10.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 10.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 9.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 9.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 9.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 9.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 9.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 9.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 9.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 9.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 9.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 9.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 9.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 9.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 9.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 9.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 9.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 9.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 9.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 9.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 9.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 9.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 9.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 9.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 9.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 9.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 9.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 8.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 8.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 8.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 8.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 8.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 8.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 8.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 8.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 8.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 8.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 8.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 8.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 8.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 8.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 8.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 8.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 8.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 8.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 8.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 8.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 8.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 8.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 8.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 8.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 8.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 8.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 8.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 8.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 8.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 8.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 8.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 8.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 8.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 7.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 7.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 7.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 7.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 7.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 7.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 7.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 7.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 7.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 7.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 7.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 7.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 7.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 7.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 7.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 7.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 7.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 7.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 7.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 7.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 7.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 7.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 7.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 7.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 7.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 7.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 6.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 6.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 6.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 6.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 6.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 6.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 6.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 6.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 6.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 6.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 6.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 6.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 6.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 6.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 6.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 6.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 6.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 6.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 6.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 6.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 6.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 6.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 5.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 5.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 5.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 5.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 5.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 5.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 5.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 5.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 5.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 5.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 5.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 5.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 5.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 5.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 5.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 4.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 4.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 4.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 4.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 4.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 4.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 4.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 4.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 4.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 4.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 3.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 3.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 3.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 2.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 8.1
Samples: 246

Max nTPM: 69.8
Min nTPM: 0.9
Std nTPM: 6.5
Median nTPM: 6.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 69.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 31.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 29.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 28.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 28.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 27.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 25.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 25.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 23.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 22.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 21.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 20.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 19.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 18.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 18.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 18.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 17.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 17.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 17.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 17.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 16.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 15.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 15.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 15.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 14.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 13.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 13.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 13.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 13.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 13.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 13.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 12.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 12.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 12.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 12.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 12.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 11.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 11.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 11.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 11.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 11.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 11.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 10.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 10.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 10.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 10.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 9.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 9.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 9.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 9.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 9.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 9.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 9.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 9.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 9.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 9.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 9.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 9.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 9.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 9.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 8.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 8.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 8.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 8.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 8.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 8.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 8.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 8.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 8.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 8.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 8.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 8.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 8.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 8.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 8.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 8.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 8.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 8.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 8.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 8.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 8.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 7.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 7.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 7.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 7.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 7.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 7.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 7.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 7.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 7.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 7.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 7.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 7.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 7.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 7.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 7.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 7.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 7.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 7.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 7.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 6.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 6.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 6.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 6.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 6.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 6.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 6.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 6.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 6.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 6.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 6.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 6.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 6.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 6.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 6.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 6.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 6.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 6.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 6.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 6.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 6.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 6.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 6.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 6.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 6.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 6.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 6.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 6.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 6.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 6.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 6.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 6.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 6.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 6.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 6.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 6.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 6.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 5.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 5.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 5.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 5.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 5.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 5.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 5.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 5.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 5.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 5.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 5.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 5.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 5.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 5.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 5.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 5.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 5.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 5.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 5.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 5.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 5.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 5.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 5.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 5.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 5.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 5.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 5.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 5.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 5.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 5.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 5.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 5.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 5.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 5.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 5.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 5.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 5.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 5.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 5.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 4.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 4.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 4.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 4.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 4.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 4.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 4.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 4.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 4.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 4.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 4.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 4.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 4.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 4.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 4.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 4.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 4.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 4.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 4.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 4.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 4.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 4.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 4.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 4.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 4.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 4.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 4.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 4.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 3.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 3.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 3.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 3.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 3.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 3.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 3.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 3.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 3.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 3.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 3.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 3.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 3.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 3.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 3.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 3.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 3.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 3.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 3.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 3.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 3.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 3.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 2.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 2.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 2.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 2.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 2.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 2.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 2.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 2.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 2.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 2.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 2.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 2.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 1.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 0.9
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Brain - Putamen (basal ganglia)
Average nTPM: 11.6
Samples: 205

Max nTPM: 51.9
Min nTPM: 2.1
Std nTPM: 7.0
Median nTPM: 9.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 51.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 45.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 39.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 36.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 35.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 30.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 29.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 27.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 26.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 23.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 23.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 23.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 22.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 21.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 21.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 21.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 20.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 20.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 19.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 19.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 18.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 18.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 17.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 17.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 17.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 17.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 17.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 17.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 17.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 16.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 16.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 16.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 16.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 16.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 15.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 15.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 15.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 15.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 15.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 14.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 14.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 14.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 14.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 14.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 14.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 14.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 14.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 14.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 14.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 14.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 14.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 14.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 13.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 13.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 13.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 13.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 13.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 13.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 13.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 13.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 13.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 13.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 13.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 12.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 12.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 12.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 12.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 12.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 12.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 12.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 12.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 12.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 12.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 11.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 11.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 11.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 11.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 11.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 11.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 11.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 11.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 11.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 11.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 11.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 10.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 10.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 10.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 10.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 10.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 10.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 10.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 10.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 10.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 10.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 10.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 10.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 10.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 9.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 9.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 9.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 9.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 9.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 9.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 9.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 9.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 9.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 9.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 9.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 9.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 9.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 9.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 9.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 8.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 8.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 8.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 8.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 8.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 8.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 8.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 8.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 8.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 8.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 8.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 8.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 8.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 8.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 8.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 8.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 8.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 8.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 8.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 8.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 8.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 8.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 8.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 8.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 8.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 8.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 7.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 7.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 7.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 7.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 7.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 7.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 7.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 7.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 7.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 7.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 7.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 7.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 7.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 7.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 6.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 6.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 6.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 6.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 6.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 6.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 6.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 6.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 6.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 6.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 6.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 6.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 6.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 6.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 6.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 6.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 6.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 6.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 5.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 5.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 5.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 5.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 5.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 5.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 5.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 5.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 5.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 5.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 5.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 5.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 4.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 4.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 4.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 4.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 4.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 4.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 4.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 4.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 3.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 3.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 3.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 3.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 2.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 2.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 2.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 26.2
FF:10164-103B2 76 years, female 26.2
Nucleus accumbens
Scaled Tags Per Million: 11.8
FF:10037-101F1 23-56 years, mixed 11.8
Putamen
Scaled Tags Per Million: 9.0
FF:10176-103C5 60 years, female 9.0
Globus pallidus
Scaled Tags Per Million: 19.1
FF:10161-103A8 76 years, female 24.2
FF:10175-103C4 60 years, female 14.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.5
Pig sample Sample description nTPM
Caudate
nTPM: 10.7
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.6
Sample A Female 10.4
Sample B Female 9.6
Sample C Male 12.6
Sample D Male 10.3
Putamen
nTPM: 7.2
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.5
Sample A Female 7.1
Sample B Female 6.5
Sample C Male 8.4
Sample D Male 6.9
Septum
nTPM: 12.5
Samples: 4

Max nTPM: 19.2
Min nTPM: 9.0
Sample A Female 9.0
Sample B Female 9.7
Sample C Male 19.2
Sample D Male 12.2
Ventral pallidum
nTPM: 9.3
Samples: 4

Max nTPM: 12.7
Min nTPM: 5.5
Sample A Female 5.5
Sample B Female 12.7
Sample C Male 11.4
Sample D Male 7.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1.0
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.8
Sample A Male 0.9
Sample B Male 0.8
Sample C Female 1.2
Sample D Female 1.1
Septum
nTPM: 0.6
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.4
Sample A Male 0.7
Sample B Male 0.5
Sample C Female 0.6
Sample D Female 0.4
Ventral forebrain
nTPM: 0.9
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.7
Sample A Male 0.7
Sample B Male 0.9
Sample C Female 1.2
Sample D Female 0.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
75826672 Antisense, RP_060601_01_D01, Mouse strain C57BL/6J (56 days, male) 0.0
Striatum
Expression energy: 0.0
75826672 Antisense, RP_060601_01_D01, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
75826672 Antisense, RP_060601_01_D01, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
75826672 Antisense, RP_060601_01_D01, Mouse strain C57BL/6J (56 days, male) 0.0

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