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  • SUMMARY

  • TISSUE

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  • CLDN5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:144.6 nTPM
HPA Brain:117.0 nTPM
GTEx:144.6 nTPM
Pig:20.8 nTPM
Mouse:18.5 nTPM
Allen mouse:2.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 51.8
2226 Male, age 75, left hemisphere 55.2
1961 Female, age 42, unknown 48.3
Dorsomedial nucleus
nTPM: 69.1
1989 Male, age 62, unknown 105.1
2017 Female, age 42, unknown 58.7
2041 Female, age 72, unknown 43.5
Lateral hypothalamic area
nTPM: 71.8
1791 Male, age 80, right hemisphere 99.7
2412 Male, age 62, unknown 80.8
2271 Male, age 75, both hemispheres 59.4
2228 Male, age 66, unknown 47.1
Mammillary body
nTPM: 117.0
2413 Male, age 66, unknown 146.9
1923 Female, age 72, unknown 142.6
1834 Female, age 42, unknown 106.9
1948 Female, age 72, unknown 104.1
1945 Male, age 80, right hemisphere 84.3
Paraventricular nucleus
nTPM: 51.8
2700 Male, age 62, unknown 51.8
Preoptic area
nTPM: 56.8
1907 Male, age 80, right hemisphere 65.6
2414 Female, age 72, unknown 56.6
1861 Female, age 42, unknown 48.2
Supraoptic nucleus
nTPM: 85.4
2835 Female, age 72, unknown 133.7
2043 Male, age 62, unknown 61.7
1894 Female, age 72, unknown 60.7
Ventromedial nucleus
nTPM: 44.1
1822 Female, age 42, unknown 47.4
1982 Female, age 72, unknown 40.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

144.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 144.6
Samples: 257

Max nTPM: 819.0
Min nTPM: 21.1
Std nTPM: 119.4
Median nTPM: 102.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 819.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 741.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 688.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 587.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 521.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 459.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 437.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 430.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 420.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 411.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 409.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 404.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 391.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 368.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 365.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 361.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 352.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 340.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 337.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 308.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 303.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 296.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 296.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 291.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 290.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 287.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 284.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 283.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 283.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 281.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 276.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 271.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 271.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 267.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 266.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 264.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 257.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 253.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 252.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 249.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 241.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 236.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 235.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 227.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 226.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 224.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 219.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 216.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 216.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 213.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 211.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 211.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 206.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 205.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 204.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 203.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 203.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 199.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 198.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 197.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 190.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 187.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 183.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 182.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 179.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 176.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 175.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 174.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 174.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 173.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 172.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 170.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 167.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 162.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 158.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 157.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 156.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 156.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 155.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 154.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 154.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 152.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 149.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 145.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 143.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 143.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 142.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 142.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 142.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 141.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 140.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 140.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 140.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 139.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 137.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 134.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 133.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 133.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 130.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 128.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 128.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 126.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 126.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 125.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 125.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 125.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 124.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 122.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 121.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 121.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 120.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 120.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 118.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 116.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 115.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 115.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 114.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 114.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 112.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 111.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 111.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 111.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 109.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 107.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 104.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 103.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 103.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 103.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 102.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 101.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 101.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 101.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 100.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 100.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 99.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 99.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 98.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 97.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 97.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 97.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 96.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 95.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 94.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 94.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 93.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 93.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 93.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 92.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 92.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 90.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 89.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 89.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 89.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 88.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 86.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 85.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 85.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 84.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 83.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 81.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 81.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 81.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 80.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 80.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 80.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 79.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 79.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 79.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 79.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 78.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 78.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 77.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 77.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 76.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 76.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 76.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 76.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 74.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 74.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 73.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 73.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 73.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 72.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 71.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 71.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 71.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 70.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 70.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 70.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 69.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 69.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 69.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 69.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 68.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 68.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 68.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 67.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 67.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 66.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 65.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 65.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 65.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 64.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 63.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 63.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 62.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 60.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 59.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 59.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 59.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 58.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 57.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 57.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 56.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 56.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 56.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 56.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 55.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 55.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 55.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 55.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 55.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 53.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 53.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 52.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 52.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 52.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 51.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 51.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 48.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 48.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 48.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 47.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 47.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 47.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 46.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 44.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 44.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 44.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 43.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 43.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 41.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 41.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 36.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 36.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 36.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 35.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 34.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 33.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 31.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 29.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 27.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 27.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 26.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 26.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 25.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 21.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 20.8
Samples: 4

Max nTPM: 26.8
Min nTPM: 12.1
Sample A Female 23.4
Sample B Female 20.8
Sample C Male 26.8
Sample D Male 12.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 18.5
Samples: 4

Max nTPM: 23.1
Min nTPM: 14.0
Sample A Male 20.2
Sample B Male 23.1
Sample C Female 14.0
Sample D Female 16.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.6
79360268 Antisense, RP_071018_01_F08, Mouse strain C57BL/6J (56 days, male) 2.6
79490120 Antisense, RP_071018_01_F08, Mouse strain C57BL/6J (56 days, male) 2.5

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