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  • TISSUE

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  • NAP1L3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:107.5 nTPM
HPA Brain:126.0 nTPM
GTEx:107.5 nTPM
Pig:135.0 nTPM
Mouse:70.3 nTPM
Allen mouse:2.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 126.0
2226 Male, age 75, left hemisphere 163.9
1961 Female, age 42, unknown 88.1
Dorsomedial nucleus
nTPM: 77.5
2017 Female, age 42, unknown 83.7
2041 Female, age 72, unknown 76.5
1989 Male, age 62, unknown 72.4
Lateral hypothalamic area
nTPM: 117.5
2228 Male, age 66, unknown 197.6
2271 Male, age 75, both hemispheres 104.2
1791 Male, age 80, right hemisphere 94.0
2412 Male, age 62, unknown 74.2
Mammillary body
nTPM: 58.2
1923 Female, age 72, unknown 80.5
1945 Male, age 80, right hemisphere 65.8
2413 Male, age 66, unknown 54.7
1948 Female, age 72, unknown 47.5
1834 Female, age 42, unknown 42.8
Paraventricular nucleus
nTPM: 87.8
2700 Male, age 62, unknown 87.8
Preoptic area
nTPM: 115.9
1907 Male, age 80, right hemisphere 186.1
1861 Female, age 42, unknown 89.6
2414 Female, age 72, unknown 72.1
Supraoptic nucleus
nTPM: 59.2
1894 Female, age 72, unknown 76.0
2835 Female, age 72, unknown 54.8
2043 Male, age 62, unknown 46.8
Ventromedial nucleus
nTPM: 82.8
1822 Female, age 42, unknown 83.5
1982 Female, age 72, unknown 82.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 107.5
Samples: 257

Max nTPM: 262.0
Min nTPM: 15.5
Std nTPM: 44.9
Median nTPM: 103.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 262.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 224.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 221.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 209.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 207.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 203.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 200.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 192.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 187.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 187.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 187.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 185.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 185.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 182.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 180.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 178.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 176.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 175.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 174.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 172.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 169.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 169.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 168.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 166.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 166.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 165.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 165.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 165.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 165.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 163.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 162.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 161.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 160.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 160.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 158.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 157.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 157.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 155.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 154.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 154.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 154.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 153.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 153.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 153.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 152.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 148.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 148.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 148.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 148.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 146.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 146.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 146.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 146.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 145.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 143.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 143.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 142.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 141.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 141.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 141.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 141.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 141.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 140.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 140.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 140.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 140.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 140.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 139.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 139.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 138.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 138.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 137.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 136.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 135.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 135.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 135.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 133.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 133.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 131.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 131.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 130.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 129.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 129.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 128.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 127.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 127.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 127.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 125.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 125.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 124.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 124.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 123.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 123.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 122.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 122.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 121.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 121.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 120.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 119.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 119.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 119.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 119.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 119.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 118.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 117.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 117.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 116.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 116.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 115.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 114.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 114.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 114.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 113.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 113.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 113.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 113.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 112.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 111.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 110.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 108.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 107.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 106.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 106.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 104.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 104.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 104.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 103.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 103.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 103.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 102.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 101.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 101.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 101.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 101.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 100.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 100.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 99.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 99.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 98.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 98.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 98.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 98.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 97.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 97.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 96.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 95.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 95.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 95.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 93.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 93.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 93.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 93.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 92.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 92.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 92.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 91.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 91.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 91.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 88.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 88.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 88.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 88.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 88.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 87.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 86.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 84.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 84.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 84.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 83.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 83.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 83.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 82.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 82.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 81.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 81.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 81.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 80.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 79.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 78.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 78.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 78.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 78.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 78.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 78.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 77.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 77.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 77.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 76.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 76.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 76.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 76.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 75.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 75.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 74.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 74.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 74.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 74.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 74.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 73.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 73.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 73.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 72.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 71.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 71.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 70.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 69.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 69.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 69.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 69.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 68.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 68.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 67.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 66.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 66.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 65.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 64.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 63.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 63.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 62.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 62.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 61.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 60.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 59.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 58.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 58.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 58.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 58.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 57.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 54.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 52.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 51.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 50.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 49.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 45.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 45.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 43.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 43.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 41.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 40.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 40.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 39.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 35.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 34.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 34.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 34.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 33.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 32.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 32.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 29.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 28.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 24.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 23.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 23.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 22.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 21.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 19.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 15.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 135.0
Samples: 4

Max nTPM: 178.6
Min nTPM: 100.9
Sample A Female 178.6
Sample B Female 155.6
Sample C Male 105.0
Sample D Male 100.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 70.3
Samples: 4

Max nTPM: 75.0
Min nTPM: 65.2
Sample A Male 66.6
Sample B Male 74.5
Sample C Female 75.0
Sample D Female 65.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.5
583576 Antisense, RP_040831_02_G09, Mouse strain C57BL/6J (56 days, male) 2.5

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