PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:39.6 nTPM
FANTOM5:40.0 Scaled Tags Per Million
Pig:30.5 nTPM
Mouse:33.9 nTPM
Allen mouse:3.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 39.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 31.1
2188 Female, age 91, both hemispheres 38.9
2301 Female, age 85, both hemispheres 31.2
2090 Male, age 80, both hemispheres 29.1
1984 Male, age 76, both hemispheres 25.3
Area postrema
nTPM: 31.0
2306 Male, age 80, both hemispheres 34.1
2799 Male, age 61, both hemispheres 33.6
2054 Male, age 76, both hemispheres 25.2
Dorsal cochlear nucleus
nTPM: 27.1
2187 Female, age 91, both hemispheres 30.5
2378 Male, age 80, both hemispheres 27.9
2058 Male, age 76, both hemispheres 26.7
2370 Male, age 61, both hemispheres 26.3
2802 Male, age 74, right hemisphere 24.1
Dorsal medullary reticular nucleus
nTPM: 31.5
2373 Male, age 61, both hemispheres 34.1
2040 Female, age 85, both hemispheres 32.8
2088 Male, age 76, both hemispheres 27.5
Dorsal motor vagal complex
nTPM: 27.4
2185 Male, age 76, both hemispheres 31.4
2813 Female, age 72, unknown 29.8
2797 Male, age 61, both hemispheres 28.1
2000 Male, age 74, unknown 27.8
2133 Female, age 91, both hemispheres 27.2
2643 Male, age 74, both hemispheres 27.2
2807 Female, age 85, both hemispheres 25.1
2844 Male, age 55, unknown 22.3
Dorsal tegmental nucleus
nTPM: 29.0
2083 Male, age 80, both hemispheres 32.1
2326 Male, age 74, both hemispheres 30.5
1936 Male, age 76, left hemisphere 28.8
2358 Male, age 61, both hemispheres 24.6
Dorsolateral tegmental area
nTPM: 31.1
2751 Female, age 85, both hemispheres 37.4
2654 Male, age 80, both hemispheres 32.2
2337 Male, age 61, both hemispheres 31.2
2360 Male, age 74, both hemispheres 30.2
2141 Male, age 76, both hemispheres 24.4
Gigantocellular reticular nuclei, medullary
nTPM: 31.7
1876 Female, age 85, both hemispheres 38.8
2314 Male, age 61, both hemispheres 35.2
2387 Female, age 91, both hemispheres 30.8
2462 Male, age 74, both hemispheres 30.7
2022 Male, age 76, right hemisphere 29.1
2310 Male, age 80, both hemispheres 25.9
Gigantocellular reticular nuclei, pars
nTPM: 29.5
2336 Male, age 61, both hemispheres 32.7
2084 Female, age 85, both hemispheres 31.9
2168 Male, age 76, both hemispheres 28.3
2706 Male, age 80, both hemispheres 27.5
2330 Male, age 80, both hemispheres 27.2
Inferior olive
nTPM: 34.1
2178 Male, age 61, both hemispheres 37.2
2085 Female, age 85, both hemispheres 34.8
2563 Male, age 74, both hemispheres 34.7
2628 Female, age 91, both hemispheres 32.6
2379 Male, age 80, both hemispheres 31.2
Kolliker-Fuse nucleus
nTPM: 33.1
2315 Male, age 76, right hemisphere 35.5
2793 Female, age 91, left hemisphere 34.7
2163 Male, age 80, both hemispheres 29.2
Lateral lemniscal nuclei
nTPM: 31.0
2320 Female, age 91, left hemisphere 33.9
2746 Female, age 85, left hemisphere 32.1
2036 Male, age 80, both hemispheres 31.3
2169 Male, age 76, both hemispheres 30.1
2453 Male, age 74, right hemisphere 27.5
Lateral medullary reticular nucleus
nTPM: 34.7
2305 Male, age 74, both hemispheres 40.9
2852 Male, age 80, both hemispheres 35.1
2374 Male, age 61, both hemispheres 35.0
2190 Female, age 85, both hemispheres 33.2
2804 Female, age 91, both hemispheres 32.8
2044 Male, age 76, both hemispheres 30.9
Lateral parabrachial nucleus
nTPM: 35.7
2792 Male, age 76, both hemispheres 45.7
2013 Male, age 80, both hemispheres 36.1
2139 Female, age 85, right hemisphere 35.5
2790 Male, age 61, both hemispheres 25.4
Lateral vestibular nucleus
nTPM: 28.6
2311 Male, age 80, both hemispheres 29.5
2184 Male, age 76, both hemispheres 27.8
Locus coeruleus
nTPM: 26.7
2788 Male, age 74, unknown 31.6
2014 Male, age 55, unknown 29.7
2317 Female, age 72, unknown 29.6
2123 Female, age 91, both hemispheres 25.4
2162 Male, age 80, both hemispheres 24.6
2720 Male, age 74, both hemispheres 23.7
1980 Male, age 76, both hemispheres 22.6
Medial olivary nucleus
nTPM: 39.6
1943 Male, age 61, both hemispheres 50.5
2138 Female, age 91, both hemispheres 37.1
1962 Male, age 76, both hemispheres 36.3
2851 Male, age 80, both hemispheres 34.5
Medial parabrachial nucleus
nTPM: 29.3
2854 Male, age 80, both hemispheres 31.9
2170 Female, age 91, both hemispheres 31.5
2786 Male, age 76, both hemispheres 29.6
2463 Female, age 85, right hemisphere 29.3
2156 Male, age 61, both hemispheres 24.4
Medial periolivary nuclei
nTPM: 32.4
2791 Male, age 74, right hemisphere 38.2
2081 Male, age 80, both hemispheres 35.7
2063 Male, age 76, both hemispheres 31.3
2458 Female, age 91, both hemispheres 29.2
2171 Female, age 85, both hemispheres 27.5
Medial vestibular nucleus
nTPM: 30.1
2803 Female, age 91, both hemispheres 35.1
2093 Male, age 80, both hemispheres 33.5
2801 Male, age 74, both hemispheres 31.0
2624 Male, age 61, both hemispheres 27.7
2743 Female, age 85, both hemispheres 27.5
2134 Male, age 76, both hemispheres 25.7
Motor facial nucleus
nTPM: 31.1
2697 Female, age 85, both hemispheres 37.5
2365 Male, age 74, right hemisphere 36.6
2795 Female, age 91, both hemispheres 29.2
2126 Male, age 61, both hemispheres 29.0
2062 Male, age 76, both hemispheres 27.5
2327 Male, age 80, both hemispheres 26.5
Motor hypoglossal nucleus
nTPM: 28.9
2125 Female, age 91, both hemispheres 32.5
2132 Female, age 85, both hemispheres 30.6
2461 Male, age 61, both hemispheres 30.6
2182 Male, age 80, both hemispheres 27.9
2277 Male, age 76, both hemispheres 23.2
Motor trigeminal nucleus
nTPM: 29.1
2309 Male, age 76, both hemispheres 31.3
2079 Male, age 80, both hemispheres 30.4
2335 Male, age 61, both hemispheres 28.3
2560 Male, age 74, both hemispheres 28.0
2321 Female, age 91, both hemispheres 27.6
Nuclei of the trapezoid body
nTPM: 28.8
2159 Male, age 61, both hemispheres 33.1
1983 Male, age 76, both hemispheres 30.2
2368 Female, age 91, both hemispheres 28.7
2166 Male, age 80, both hemispheres 28.5
2735 Female, age 85, both hemispheres 23.6
Nucleus ambiguus
nTPM: 30.3
2071 Male, age 76, both hemispheres 38.6
2096 Female, age 85, both hemispheres 22.1
Nucleus cuneatus
nTPM: 29.1
2380 Male, age 80, both hemispheres 31.9
2381 Male, age 80, both hemispheres 30.9
2100 Male, age 76, both hemispheres 30.3
2808 Female, age 85, both hemispheres 30.3
2564 Male, age 74, both hemispheres 30.1
2376 Male, age 61, both hemispheres 28.1
2131 Male, age 76, both hemispheres 27.0
2805 Female, age 91, both hemispheres 27.0
2562 Male, age 61, both hemispheres 26.5
Nucleus gracilis
nTPM: 34.2
2627 Male, age 74, both hemispheres 36.1
2382 Male, age 80, both hemispheres 35.0
2299 Female, age 85, both hemispheres 31.4
Nucleus raphe magnus
nTPM: 29.2
2455 Male, age 74, both hemispheres 32.0
2051 Male, age 76, both hemispheres 31.8
2328 Male, age 80, both hemispheres 30.2
2459 Female, age 91, both hemispheres 29.9
2160 Male, age 61, both hemispheres 27.8
2172 Female, age 85, both hemispheres 23.6
Nucleus raphe obscurus
nTPM: 35.7
2142 Male, age 76, midline 38.2
2845 Female, age 85, midline 34.6
2800 Male, age 61, midline 34.3
Nucleus raphe pallidus
nTPM: 36.0
1924 Male, age 61, midline 42.8
2145 Male, age 76, midline 35.6
2183 Male, age 80, midline 29.5
Nucleus tractus solitarii
nTPM: 27.4
2144 Female, age 91, right hemisphere 41.9
2191 Female, age 85, both hemispheres 24.9
2656 Male, age 76, both hemispheres 21.7
2307 Male, age 80, both hemispheres 21.0
Paramedian reticular nucleus
nTPM: 31.8
2052 Male, age 76, both hemispheres 35.9
2057 Male, age 80, both hemispheres 31.3
2313 Male, age 61, both hemispheres 30.0
2050 Female, age 85, both hemispheres 29.9
Parvicellular reticular nuclei
nTPM: 29.5
2119 Male, age 80, both hemispheres 32.6
2095 Male, age 76, both hemispheres 31.7
2558 Male, age 74, both hemispheres 24.3
Parvicellular reticular nuclei, medullary
nTPM: 28.6
2189 Female, age 91, both hemispheres 31.0
2091 Female, age 85, both hemispheres 28.2
2181 Male, age 80, left hemisphere 26.7
Pedunculopontine tegmental nucleus
nTPM: 31.1
2338 Male, age 61, both hemispheres 31.8
2334 Male, age 80, both hemispheres 31.5
1921 Female, age 85, both hemispheres 30.0
Peritrigeminal nucleus
nTPM: 33.3
2067 Female, age 85, both hemispheres 35.8
2136 Male, age 76, both hemispheres 33.6
2179 Male, age 61, both hemispheres 30.4
Pontine nuclei
nTPM: 34.0
2319 Female, age 91, both hemispheres 38.6
2454 Male, age 74, left hemisphere 37.8
1863 Male, age 55, unknown 35.3
2109 Female, age 72, unknown 33.9
2115 Male, age 80, left hemisphere 33.7
1968 Male, age 76, left hemisphere 32.5
2727 Male, age 61, right hemisphere 31.6
2787 Female, age 85, both hemispheres 29.0
Pontine raphe nucleus
nTPM: 28.6
2122 Female, age 85, midline 29.2
2853 Male, age 76, midline 28.1
Posteroventral cochlear nucleus
nTPM: 35.9
2135 Female, age 91, both hemispheres 47.3
2341 Male, age 80, both hemispheres 39.9
2070 Male, age 76, both hemispheres 32.1
2752 Female, age 85, both hemispheres 30.7
2371 Male, age 61, both hemispheres 29.7
Prepositus hypoglossal nucleus
nTPM: 28.7
2855 Female, age 85, right hemisphere 29.9
2086 Male, age 80, both hemispheres 27.4
Principal sensory trigeminal nucleus
nTPM: 28.1
2367 Female, age 91, left hemisphere 33.0
2324 Male, age 76, both hemispheres 28.4
2008 Male, age 80, left hemisphere 26.6
2158 Male, age 61, both hemispheres 24.5
Reticular pontine nucleus, caudal
nTPM: 32.2
2092 Male, age 76, both hemispheres 37.1
2457 Female, age 91, both hemispheres 32.3
2559 Male, age 74, both hemispheres 31.0
2332 Male, age 80, right hemisphere 28.4
Reticular pontine nucleus, oral
nTPM: 33.8
2366 Female, age 91, both hemispheres 41.6
1939 Male, age 80, both hemispheres 35.1
2012 Female, age 85, both hemispheres 32.9
2167 Male, age 76, both hemispheres 32.6
2361 Male, age 74, both hemispheres 27.0
Reticulotegmental nucleus
nTPM: 28.1
2333 Male, age 80, both hemispheres 28.9
2322 Female, age 91, both hemispheres 28.4
2452 Male, age 74, both hemispheres 27.9
2325 Male, age 76, both hemispheres 27.2
Spinal trigeminal nucleus, caudal
nTPM: 29.9
2312 Male, age 61, both hemispheres 32.0
2390 Female, age 91, both hemispheres 31.1
2642 Male, age 74, both hemispheres 29.6
2308 Male, age 80, both hemispheres 29.5
2447 Male, age 76, both hemispheres 27.4
Spinal trigeminal nucleus, interpolar
nTPM: 30.0
2386 Female, age 85, both hemispheres 31.5
2625 Male, age 61, both hemispheres 31.4
2389 Female, age 91, both hemispheres 30.0
2033 Male, age 80, both hemispheres 29.0
2066 Male, age 76, right hemisphere 27.9
Spinal trigeminal nucleus, oral
nTPM: 27.6
1978 Male, age 76, both hemispheres 28.1
2737 Female, age 85, both hemispheres 28.1
2164 Male, age 80, both hemispheres 26.8
Spinal vestibular nucleus
nTPM: 31.7
2186 Female, age 91, both hemispheres 35.6
2748 Male, age 76, both hemispheres 33.0
2806 Female, age 85, both hemispheres 32.9
2780 Male, age 80, both hemispheres 30.4
2796 Male, age 61, both hemispheres 29.9
2384 Male, age 74, both hemispheres 28.3
Subcoeruleus area
nTPM: 31.6
2369 Female, age 85, left hemisphere 40.8
1958 Male, age 80, both hemispheres 32.7
2089 Male, age 76, left hemisphere 29.7
2451 Male, age 74, both hemispheres 28.6
2323 Female, age 91, left hemisphere 26.4
Superior olive
nTPM: 33.0
2364 Male, age 74, right hemisphere 37.0
2020 Male, age 76, both hemispheres 36.5
1875 Female, age 85, both hemispheres 34.0
2561 Female, age 91, both hemispheres 29.3
2329 Male, age 80, right hemisphere 28.3
Superior vestibular nucleus
nTPM: 31.3
2383 Male, age 74, both hemispheres 35.7
2015 Male, age 80, both hemispheres 30.2
2061 Male, age 76, both hemispheres 27.8
Ventral medullary reticular nucleus
nTPM: 32.6
2372 Male, age 61, both hemispheres 35.1
2060 Male, age 76, both hemispheres 30.1
Ventral periolivary nuclei
nTPM: 31.5
2023 Male, age 76, both hemispheres 42.6
2165 Male, age 80, both hemispheres 29.5
2130 Female, age 85, both hemispheres 28.6
2794 Female, age 91, left hemisphere 25.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 32.2
1986 Male, age 76, both hemispheres 34.4
2118 Male, age 80, both hemispheres 34.2
2180 Male, age 61, both hemispheres 31.7
2741 Female, age 85, both hemispheres 31.0
2302 Female, age 91, both hemispheres 29.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 31.2
1959 Male, age 76, both hemispheres 34.5
2840 Female, age 85, both hemispheres 33.7
2359 Male, age 61, both hemispheres 30.3
2456 Female, age 91, both hemispheres 29.9
2449 Male, age 74, both hemispheres 29.7
2161 Male, age 80, both hemispheres 28.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 40.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 35.8
FF:10165-103B3 76 years, female 38.1
FF:10182-103D2 60 years, female 33.5
Medulla oblongata
Scaled Tags Per Million: 34.6
FF:10038-101F2 18-64 years, mixed 38.4
FF:10155-103A2 76 years, female 36.9
FF:10174-103C3 60 years, female 28.7
Pons
Scaled Tags Per Million: 40.0
FF:10033-101E6 18-54 years, mixed 40.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 30.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 30.5
Samples: 4

Max nTPM: 50.1
Min nTPM: 16.4
Sample A Female 23.9
Sample B Female 16.4
Sample C Male 31.6
Sample D Male 50.1
Pons
nTPM: 20.3
Samples: 4

Max nTPM: 24.7
Min nTPM: 14.2
Sample A Female 24.7
Sample B Female 14.2
Sample C Male 18.5
Sample D Male 23.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 33.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 33.9
Samples: 4

Max nTPM: 35.3
Min nTPM: 32.5
Sample A Male 32.5
Sample B Male 35.3
Sample C Female 33.1
Sample D Female 34.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.6
68410303 Antisense, RP_041214_01_F05, Mouse strain C57BL/6J (56 days, male) 3.6
Pons
Expression energy: 3.5
68410303 Antisense, RP_041214_01_F05, Mouse strain C57BL/6J (56 days, male) 3.5

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