PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:69.4 nTPM
FANTOM5:117.4 Scaled Tags Per Million
Pig:59.7 nTPM
Mouse:27.2 nTPM
Allen mouse:5.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 69.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 64.5
2188 Female, age 91, both hemispheres 79.7
2090 Male, age 80, both hemispheres 68.6
2301 Female, age 85, both hemispheres 56.0
1984 Male, age 76, both hemispheres 53.8
Area postrema
nTPM: 55.0
2306 Male, age 80, both hemispheres 64.2
2054 Male, age 76, both hemispheres 51.9
2799 Male, age 61, both hemispheres 49.0
Dorsal cochlear nucleus
nTPM: 59.7
2187 Female, age 91, both hemispheres 69.2
2378 Male, age 80, both hemispheres 66.1
2370 Male, age 61, both hemispheres 58.1
2058 Male, age 76, both hemispheres 56.8
2802 Male, age 74, right hemisphere 48.5
Dorsal medullary reticular nucleus
nTPM: 57.1
2088 Male, age 76, both hemispheres 64.3
2373 Male, age 61, both hemispheres 54.5
2040 Female, age 85, both hemispheres 52.5
Dorsal motor vagal complex
nTPM: 55.1
2185 Male, age 76, both hemispheres 74.1
2807 Female, age 85, both hemispheres 68.0
2813 Female, age 72, unknown 59.2
2844 Male, age 55, unknown 52.3
2133 Female, age 91, both hemispheres 51.0
2643 Male, age 74, both hemispheres 47.5
2000 Male, age 74, unknown 46.9
2797 Male, age 61, both hemispheres 41.8
Dorsal tegmental nucleus
nTPM: 57.4
2358 Male, age 61, both hemispheres 60.7
2083 Male, age 80, both hemispheres 56.9
2326 Male, age 74, both hemispheres 56.5
1936 Male, age 76, left hemisphere 55.4
Dorsolateral tegmental area
nTPM: 62.7
2337 Male, age 61, both hemispheres 80.2
2360 Male, age 74, both hemispheres 59.8
2654 Male, age 80, both hemispheres 58.0
2141 Male, age 76, both hemispheres 57.8
2751 Female, age 85, both hemispheres 57.7
Gigantocellular reticular nuclei, medullary
nTPM: 58.8
2314 Male, age 61, both hemispheres 67.6
2387 Female, age 91, both hemispheres 65.8
1876 Female, age 85, both hemispheres 60.9
2022 Male, age 76, right hemisphere 55.6
2310 Male, age 80, both hemispheres 55.5
2462 Male, age 74, both hemispheres 47.6
Gigantocellular reticular nuclei, pars
nTPM: 60.1
2706 Male, age 80, both hemispheres 69.9
2336 Male, age 61, both hemispheres 64.5
2330 Male, age 80, both hemispheres 58.9
2084 Female, age 85, both hemispheres 55.7
2168 Male, age 76, both hemispheres 51.3
Inferior olive
nTPM: 60.5
2628 Female, age 91, both hemispheres 76.7
2379 Male, age 80, both hemispheres 59.9
2178 Male, age 61, both hemispheres 59.6
2085 Female, age 85, both hemispheres 53.8
2563 Male, age 74, both hemispheres 52.2
Kolliker-Fuse nucleus
nTPM: 61.4
2793 Female, age 91, left hemisphere 78.1
2315 Male, age 76, right hemisphere 54.9
2163 Male, age 80, both hemispheres 51.1
Lateral lemniscal nuclei
nTPM: 59.0
2320 Female, age 91, left hemisphere 69.6
2746 Female, age 85, left hemisphere 63.6
2453 Male, age 74, right hemisphere 60.5
2036 Male, age 80, both hemispheres 50.7
2169 Male, age 76, both hemispheres 50.6
Lateral medullary reticular nucleus
nTPM: 61.8
2852 Male, age 80, both hemispheres 69.2
2374 Male, age 61, both hemispheres 67.0
2305 Male, age 74, both hemispheres 66.0
2190 Female, age 85, both hemispheres 57.8
2804 Female, age 91, both hemispheres 56.4
2044 Male, age 76, both hemispheres 54.6
Lateral parabrachial nucleus
nTPM: 59.5
2792 Male, age 76, both hemispheres 66.9
2013 Male, age 80, both hemispheres 59.1
2139 Female, age 85, right hemisphere 57.4
2790 Male, age 61, both hemispheres 54.6
Lateral vestibular nucleus
nTPM: 55.4
2311 Male, age 80, both hemispheres 57.6
2184 Male, age 76, both hemispheres 53.1
Locus coeruleus
nTPM: 51.7
2720 Male, age 74, both hemispheres 63.9
2788 Male, age 74, unknown 53.6
2162 Male, age 80, both hemispheres 52.7
2014 Male, age 55, unknown 50.9
2123 Female, age 91, both hemispheres 47.7
1980 Male, age 76, both hemispheres 47.5
2317 Female, age 72, unknown 45.8
Medial olivary nucleus
nTPM: 67.7
1943 Male, age 61, both hemispheres 74.2
1962 Male, age 76, both hemispheres 70.5
2851 Male, age 80, both hemispheres 66.4
2138 Female, age 91, both hemispheres 59.6
Medial parabrachial nucleus
nTPM: 57.4
2854 Male, age 80, both hemispheres 63.2
2786 Male, age 76, both hemispheres 59.4
2170 Female, age 91, both hemispheres 57.0
2463 Female, age 85, right hemisphere 56.6
2156 Male, age 61, both hemispheres 51.1
Medial periolivary nuclei
nTPM: 61.5
2458 Female, age 91, both hemispheres 71.8
2081 Male, age 80, both hemispheres 68.4
2791 Male, age 74, right hemisphere 61.6
2171 Female, age 85, both hemispheres 57.9
2063 Male, age 76, both hemispheres 47.6
Medial vestibular nucleus
nTPM: 57.4
2624 Male, age 61, both hemispheres 69.3
2801 Male, age 74, both hemispheres 62.6
2743 Female, age 85, both hemispheres 56.2
2803 Female, age 91, both hemispheres 56.2
2093 Male, age 80, both hemispheres 52.4
2134 Male, age 76, both hemispheres 47.6
Motor facial nucleus
nTPM: 60.2
2697 Female, age 85, both hemispheres 74.7
2365 Male, age 74, right hemisphere 66.2
2126 Male, age 61, both hemispheres 59.8
2795 Female, age 91, both hemispheres 56.0
2327 Male, age 80, both hemispheres 55.5
2062 Male, age 76, both hemispheres 49.3
Motor hypoglossal nucleus
nTPM: 55.5
2132 Female, age 85, both hemispheres 61.6
2182 Male, age 80, both hemispheres 56.7
2125 Female, age 91, both hemispheres 56.4
2277 Male, age 76, both hemispheres 54.0
2461 Male, age 61, both hemispheres 48.8
Motor trigeminal nucleus
nTPM: 61.6
2321 Female, age 91, both hemispheres 70.8
2079 Male, age 80, both hemispheres 64.3
2560 Male, age 74, both hemispheres 60.5
2309 Male, age 76, both hemispheres 59.6
2335 Male, age 61, both hemispheres 53.1
Nuclei of the trapezoid body
nTPM: 56.1
2166 Male, age 80, both hemispheres 66.3
2368 Female, age 91, both hemispheres 61.2
1983 Male, age 76, both hemispheres 53.0
2735 Female, age 85, both hemispheres 50.9
2159 Male, age 61, both hemispheres 49.4
Nucleus ambiguus
nTPM: 58.2
2071 Male, age 76, both hemispheres 68.4
2096 Female, age 85, both hemispheres 48.0
Nucleus cuneatus
nTPM: 59.9
2380 Male, age 80, both hemispheres 66.3
2808 Female, age 85, both hemispheres 65.8
2100 Male, age 76, both hemispheres 64.5
2381 Male, age 80, both hemispheres 64.1
2131 Male, age 76, both hemispheres 60.6
2564 Male, age 74, both hemispheres 55.2
2376 Male, age 61, both hemispheres 55.1
2805 Female, age 91, both hemispheres 54.9
2562 Male, age 61, both hemispheres 52.1
Nucleus gracilis
nTPM: 68.7
2382 Male, age 80, both hemispheres 78.8
2627 Male, age 74, both hemispheres 66.7
2299 Female, age 85, both hemispheres 60.7
Nucleus raphe magnus
nTPM: 56.6
2459 Female, age 91, both hemispheres 69.1
2328 Male, age 80, both hemispheres 60.6
2172 Female, age 85, both hemispheres 57.9
2455 Male, age 74, both hemispheres 55.0
2160 Male, age 61, both hemispheres 48.6
2051 Male, age 76, both hemispheres 48.2
Nucleus raphe obscurus
nTPM: 69.4
2142 Male, age 76, midline 72.4
2800 Male, age 61, midline 71.8
2845 Female, age 85, midline 63.9
Nucleus raphe pallidus
nTPM: 67.6
2145 Male, age 76, midline 73.8
1924 Male, age 61, midline 68.0
2183 Male, age 80, midline 60.9
Nucleus tractus solitarii
nTPM: 55.8
2191 Female, age 85, both hemispheres 61.8
2307 Male, age 80, both hemispheres 59.3
2656 Male, age 76, both hemispheres 56.4
2144 Female, age 91, right hemisphere 45.8
Paramedian reticular nucleus
nTPM: 54.0
2052 Male, age 76, both hemispheres 61.8
2050 Female, age 85, both hemispheres 53.9
2057 Male, age 80, both hemispheres 52.0
2313 Male, age 61, both hemispheres 48.5
Parvicellular reticular nuclei
nTPM: 59.5
2558 Male, age 74, both hemispheres 62.5
2095 Male, age 76, both hemispheres 60.1
2119 Male, age 80, both hemispheres 55.8
Parvicellular reticular nuclei, medullary
nTPM: 57.2
2181 Male, age 80, left hemisphere 60.2
2189 Female, age 91, both hemispheres 57.1
2091 Female, age 85, both hemispheres 54.4
Pedunculopontine tegmental nucleus
nTPM: 58.4
2338 Male, age 61, both hemispheres 66.1
2334 Male, age 80, both hemispheres 55.1
1921 Female, age 85, both hemispheres 53.9
Peritrigeminal nucleus
nTPM: 58.0
2136 Male, age 76, both hemispheres 61.9
2179 Male, age 61, both hemispheres 58.0
2067 Female, age 85, both hemispheres 54.0
Pontine nuclei
nTPM: 62.1
2454 Male, age 74, left hemisphere 77.4
2319 Female, age 91, both hemispheres 72.7
2115 Male, age 80, left hemisphere 69.0
2109 Female, age 72, unknown 58.9
2787 Female, age 85, both hemispheres 58.7
1968 Male, age 76, left hemisphere 58.3
1863 Male, age 55, unknown 51.3
2727 Male, age 61, right hemisphere 50.8
Pontine raphe nucleus
nTPM: 53.3
2122 Female, age 85, midline 54.5
2853 Male, age 76, midline 52.0
Posteroventral cochlear nucleus
nTPM: 67.3
2135 Female, age 91, both hemispheres 88.6
2341 Male, age 80, both hemispheres 67.8
2371 Male, age 61, both hemispheres 63.6
2070 Male, age 76, both hemispheres 61.3
2752 Female, age 85, both hemispheres 55.3
Prepositus hypoglossal nucleus
nTPM: 55.0
2855 Female, age 85, right hemisphere 57.1
2086 Male, age 80, both hemispheres 52.8
Principal sensory trigeminal nucleus
nTPM: 60.7
2367 Female, age 91, left hemisphere 81.0
2008 Male, age 80, left hemisphere 56.4
2324 Male, age 76, both hemispheres 55.5
2158 Male, age 61, both hemispheres 50.0
Reticular pontine nucleus, caudal
nTPM: 60.0
2559 Male, age 74, both hemispheres 68.4
2457 Female, age 91, both hemispheres 61.6
2092 Male, age 76, both hemispheres 57.2
2332 Male, age 80, right hemisphere 52.9
Reticular pontine nucleus, oral
nTPM: 61.1
2366 Female, age 91, both hemispheres 95.1
2167 Male, age 76, both hemispheres 57.0
2012 Female, age 85, both hemispheres 55.5
1939 Male, age 80, both hemispheres 53.8
2361 Male, age 74, both hemispheres 43.8
Reticulotegmental nucleus
nTPM: 56.5
2322 Female, age 91, both hemispheres 63.8
2333 Male, age 80, both hemispheres 55.7
2452 Male, age 74, both hemispheres 55.1
2325 Male, age 76, both hemispheres 51.5
Spinal trigeminal nucleus, caudal
nTPM: 58.1
2642 Male, age 74, both hemispheres 63.0
2312 Male, age 61, both hemispheres 61.8
2447 Male, age 76, both hemispheres 56.3
2308 Male, age 80, both hemispheres 55.7
2390 Female, age 91, both hemispheres 53.8
Spinal trigeminal nucleus, interpolar
nTPM: 55.6
2389 Female, age 91, both hemispheres 59.6
2386 Female, age 85, both hemispheres 58.9
2625 Male, age 61, both hemispheres 54.4
2033 Male, age 80, both hemispheres 54.1
2066 Male, age 76, right hemisphere 51.2
Spinal trigeminal nucleus, oral
nTPM: 55.0
2164 Male, age 80, both hemispheres 56.1
1978 Male, age 76, both hemispheres 55.4
2737 Female, age 85, both hemispheres 53.5
Spinal vestibular nucleus
nTPM: 56.7
2748 Male, age 76, both hemispheres 60.3
2796 Male, age 61, both hemispheres 58.7
2384 Male, age 74, both hemispheres 56.4
2806 Female, age 85, both hemispheres 55.7
2186 Female, age 91, both hemispheres 55.6
2780 Male, age 80, both hemispheres 53.7
Subcoeruleus area
nTPM: 56.1
2369 Female, age 85, left hemisphere 65.8
2089 Male, age 76, left hemisphere 58.5
1958 Male, age 80, both hemispheres 55.6
2451 Male, age 74, both hemispheres 50.9
2323 Female, age 91, left hemisphere 49.8
Superior olive
nTPM: 61.8
2561 Female, age 91, both hemispheres 71.9
2329 Male, age 80, right hemisphere 60.5
1875 Female, age 85, both hemispheres 59.9
2364 Male, age 74, right hemisphere 58.9
2020 Male, age 76, both hemispheres 57.7
Superior vestibular nucleus
nTPM: 56.5
2383 Male, age 74, both hemispheres 62.0
2061 Male, age 76, both hemispheres 55.9
2015 Male, age 80, both hemispheres 51.4
Ventral medullary reticular nucleus
nTPM: 59.3
2372 Male, age 61, both hemispheres 60.0
2060 Male, age 76, both hemispheres 58.6
Ventral periolivary nuclei
nTPM: 61.0
2794 Female, age 91, left hemisphere 66.2
2023 Male, age 76, both hemispheres 65.6
2130 Female, age 85, both hemispheres 56.6
2165 Male, age 80, both hemispheres 55.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 58.4
2118 Male, age 80, both hemispheres 65.4
2180 Male, age 61, both hemispheres 61.7
1986 Male, age 76, both hemispheres 56.1
2302 Female, age 91, both hemispheres 54.9
2741 Female, age 85, both hemispheres 53.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 63.4
2359 Male, age 61, both hemispheres 76.5
2456 Female, age 91, both hemispheres 65.9
2449 Male, age 74, both hemispheres 63.9
2840 Female, age 85, both hemispheres 60.4
2161 Male, age 80, both hemispheres 59.4
1959 Male, age 76, both hemispheres 54.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 117.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 112.6
FF:10182-103D2 60 years, female 114.4
FF:10165-103B3 76 years, female 110.8
Medulla oblongata
Scaled Tags Per Million: 117.4
FF:10174-103C3 60 years, female 121.4
FF:10038-101F2 18-64 years, mixed 118.4
FF:10155-103A2 76 years, female 112.4
Pons
Scaled Tags Per Million: 101.8
FF:10033-101E6 18-54 years, mixed 101.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 59.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 59.8
Samples: 4

Max nTPM: 65.2
Min nTPM: 53.4
Sample A Female 63.2
Sample B Female 53.4
Sample C Male 57.2
Sample D Male 65.2
Pons
nTPM: 51.6
Samples: 4

Max nTPM: 56.3
Min nTPM: 45.6
Sample A Female 50.0
Sample B Female 56.3
Sample C Male 45.6
Sample D Male 54.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 27.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 27.2
Samples: 4

Max nTPM: 30.1
Min nTPM: 23.4
Sample A Male 28.4
Sample B Male 30.1
Sample C Female 27.0
Sample D Female 23.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.9
69818030 Antisense, RP_050510_04_C06, Mouse strain C57BL/6J (56 days, male) 4.9
Pons
Expression energy: 5.2
69818030 Antisense, RP_050510_04_C06, Mouse strain C57BL/6J (56 days, male) 5.2

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