PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:25.2 nTPM
FANTOM5:42.7 Scaled Tags Per Million
Pig:28.5 nTPM
Mouse:7.8 nTPM
Allen mouse:0.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 25.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 23.1
2188 Female, age 91, both hemispheres 26.1
2090 Male, age 80, both hemispheres 25.8
2301 Female, age 85, both hemispheres 24.6
1984 Male, age 76, both hemispheres 15.8
Area postrema
nTPM: 16.9
2306 Male, age 80, both hemispheres 21.1
2799 Male, age 61, both hemispheres 15.7
2054 Male, age 76, both hemispheres 13.9
Dorsal cochlear nucleus
nTPM: 18.2
2378 Male, age 80, both hemispheres 22.1
2187 Female, age 91, both hemispheres 20.1
2802 Male, age 74, right hemisphere 17.9
2370 Male, age 61, both hemispheres 15.6
2058 Male, age 76, both hemispheres 15.2
Dorsal medullary reticular nucleus
nTPM: 19.4
2040 Female, age 85, both hemispheres 21.9
2373 Male, age 61, both hemispheres 18.7
2088 Male, age 76, both hemispheres 17.7
Dorsal motor vagal complex
nTPM: 14.0
2000 Male, age 74, unknown 18.4
2185 Male, age 76, both hemispheres 18.1
2807 Female, age 85, both hemispheres 15.9
2133 Female, age 91, both hemispheres 15.0
2813 Female, age 72, unknown 12.1
2797 Male, age 61, both hemispheres 11.4
2844 Male, age 55, unknown 11.0
2643 Male, age 74, both hemispheres 9.8
Dorsal tegmental nucleus
nTPM: 17.8
2083 Male, age 80, both hemispheres 20.1
2326 Male, age 74, both hemispheres 18.6
1936 Male, age 76, left hemisphere 17.3
2358 Male, age 61, both hemispheres 15.1
Dorsolateral tegmental area
nTPM: 18.9
2751 Female, age 85, both hemispheres 25.0
2654 Male, age 80, both hemispheres 20.0
2337 Male, age 61, both hemispheres 18.4
2360 Male, age 74, both hemispheres 16.1
2141 Male, age 76, both hemispheres 15.2
Gigantocellular reticular nuclei, medullary
nTPM: 20.1
1876 Female, age 85, both hemispheres 25.6
2314 Male, age 61, both hemispheres 23.8
2387 Female, age 91, both hemispheres 23.0
2310 Male, age 80, both hemispheres 17.6
2022 Male, age 76, right hemisphere 17.2
2462 Male, age 74, both hemispheres 13.6
Gigantocellular reticular nuclei, pars
nTPM: 18.4
2706 Male, age 80, both hemispheres 20.4
2336 Male, age 61, both hemispheres 19.5
2330 Male, age 80, both hemispheres 18.9
2084 Female, age 85, both hemispheres 18.7
2168 Male, age 76, both hemispheres 14.5
Inferior olive
nTPM: 22.5
2178 Male, age 61, both hemispheres 24.8
2085 Female, age 85, both hemispheres 23.7
2563 Male, age 74, both hemispheres 22.9
2379 Male, age 80, both hemispheres 22.3
2628 Female, age 91, both hemispheres 18.9
Kolliker-Fuse nucleus
nTPM: 18.7
2793 Female, age 91, left hemisphere 24.3
2163 Male, age 80, both hemispheres 18.3
2315 Male, age 76, right hemisphere 13.3
Lateral lemniscal nuclei
nTPM: 19.6
2746 Female, age 85, left hemisphere 23.3
2320 Female, age 91, left hemisphere 23.1
2453 Male, age 74, right hemisphere 19.6
2036 Male, age 80, both hemispheres 17.9
2169 Male, age 76, both hemispheres 14.2
Lateral medullary reticular nucleus
nTPM: 21.9
2305 Male, age 74, both hemispheres 27.9
2852 Male, age 80, both hemispheres 23.3
2190 Female, age 85, both hemispheres 23.2
2374 Male, age 61, both hemispheres 21.1
2044 Male, age 76, both hemispheres 18.3
2804 Female, age 91, both hemispheres 17.6
Lateral parabrachial nucleus
nTPM: 19.3
2792 Male, age 76, both hemispheres 21.4
2013 Male, age 80, both hemispheres 20.7
2790 Male, age 61, both hemispheres 18.9
2139 Female, age 85, right hemisphere 16.2
Lateral vestibular nucleus
nTPM: 18.4
2311 Male, age 80, both hemispheres 18.6
2184 Male, age 76, both hemispheres 18.1
Locus coeruleus
nTPM: 14.1
2162 Male, age 80, both hemispheres 16.3
2788 Male, age 74, unknown 15.2
2014 Male, age 55, unknown 14.5
2123 Female, age 91, both hemispheres 14.1
1980 Male, age 76, both hemispheres 13.1
2720 Male, age 74, both hemispheres 13.1
2317 Female, age 72, unknown 12.5
Medial olivary nucleus
nTPM: 23.7
1943 Male, age 61, both hemispheres 28.1
1962 Male, age 76, both hemispheres 24.0
2138 Female, age 91, both hemispheres 21.8
2851 Male, age 80, both hemispheres 21.0
Medial parabrachial nucleus
nTPM: 18.6
2170 Female, age 91, both hemispheres 20.0
2463 Female, age 85, right hemisphere 19.8
2854 Male, age 80, both hemispheres 19.8
2786 Male, age 76, both hemispheres 18.1
2156 Male, age 61, both hemispheres 15.0
Medial periolivary nuclei
nTPM: 20.0
2081 Male, age 80, both hemispheres 24.6
2458 Female, age 91, both hemispheres 23.1
2791 Male, age 74, right hemisphere 22.4
2171 Female, age 85, both hemispheres 16.4
2063 Male, age 76, both hemispheres 13.4
Medial vestibular nucleus
nTPM: 19.4
2093 Male, age 80, both hemispheres 23.3
2801 Male, age 74, both hemispheres 20.5
2803 Female, age 91, both hemispheres 20.5
2624 Male, age 61, both hemispheres 19.1
2743 Female, age 85, both hemispheres 17.6
2134 Male, age 76, both hemispheres 15.7
Motor facial nucleus
nTPM: 18.8
2697 Female, age 85, both hemispheres 23.1
2365 Male, age 74, right hemisphere 22.5
2126 Male, age 61, both hemispheres 20.9
2795 Female, age 91, both hemispheres 17.7
2327 Male, age 80, both hemispheres 15.5
2062 Male, age 76, both hemispheres 13.1
Motor hypoglossal nucleus
nTPM: 18.2
2132 Female, age 85, both hemispheres 23.0
2182 Male, age 80, both hemispheres 21.3
2125 Female, age 91, both hemispheres 20.8
2461 Male, age 61, both hemispheres 13.8
2277 Male, age 76, both hemispheres 12.0
Motor trigeminal nucleus
nTPM: 18.3
2321 Female, age 91, both hemispheres 20.7
2560 Male, age 74, both hemispheres 20.2
2309 Male, age 76, both hemispheres 18.5
2079 Male, age 80, both hemispheres 17.4
2335 Male, age 61, both hemispheres 14.9
Nuclei of the trapezoid body
nTPM: 16.7
2368 Female, age 91, both hemispheres 19.7
2166 Male, age 80, both hemispheres 19.5
2159 Male, age 61, both hemispheres 15.6
2735 Female, age 85, both hemispheres 14.4
1983 Male, age 76, both hemispheres 14.0
Nucleus ambiguus
nTPM: 18.3
2071 Male, age 76, both hemispheres 21.5
2096 Female, age 85, both hemispheres 15.1
Nucleus cuneatus
nTPM: 20.2
2380 Male, age 80, both hemispheres 28.3
2808 Female, age 85, both hemispheres 24.2
2381 Male, age 80, both hemispheres 23.7
2100 Male, age 76, both hemispheres 20.6
2376 Male, age 61, both hemispheres 19.2
2131 Male, age 76, both hemispheres 18.5
2805 Female, age 91, both hemispheres 18.4
2564 Male, age 74, both hemispheres 15.3
2562 Male, age 61, both hemispheres 13.8
Nucleus gracilis
nTPM: 22.2
2382 Male, age 80, both hemispheres 27.6
2299 Female, age 85, both hemispheres 22.0
2627 Male, age 74, both hemispheres 17.2
Nucleus raphe magnus
nTPM: 16.2
2459 Female, age 91, both hemispheres 20.0
2455 Male, age 74, both hemispheres 18.6
2328 Male, age 80, both hemispheres 17.4
2051 Male, age 76, both hemispheres 16.6
2172 Female, age 85, both hemispheres 13.1
2160 Male, age 61, both hemispheres 11.6
Nucleus raphe obscurus
nTPM: 25.2
2845 Female, age 85, midline 29.5
2800 Male, age 61, midline 24.0
2142 Male, age 76, midline 22.2
Nucleus raphe pallidus
nTPM: 23.6
1924 Male, age 61, midline 25.7
2145 Male, age 76, midline 22.9
2183 Male, age 80, midline 22.2
Nucleus tractus solitarii
nTPM: 13.2
2144 Female, age 91, right hemisphere 15.8
2191 Female, age 85, both hemispheres 13.1
2656 Male, age 76, both hemispheres 13.0
2307 Male, age 80, both hemispheres 10.9
Paramedian reticular nucleus
nTPM: 19.2
2052 Male, age 76, both hemispheres 21.4
2057 Male, age 80, both hemispheres 21.2
2050 Female, age 85, both hemispheres 19.0
2313 Male, age 61, both hemispheres 15.3
Parvicellular reticular nuclei
nTPM: 19.4
2119 Male, age 80, both hemispheres 21.2
2095 Male, age 76, both hemispheres 19.2
2558 Male, age 74, both hemispheres 17.8
Parvicellular reticular nuclei, medullary
nTPM: 16.9
2189 Female, age 91, both hemispheres 18.2
2091 Female, age 85, both hemispheres 17.8
2181 Male, age 80, left hemisphere 14.6
Pedunculopontine tegmental nucleus
nTPM: 17.5
2338 Male, age 61, both hemispheres 17.9
1921 Female, age 85, both hemispheres 17.3
2334 Male, age 80, both hemispheres 17.3
Peritrigeminal nucleus
nTPM: 18.3
2179 Male, age 61, both hemispheres 18.8
2136 Male, age 76, both hemispheres 18.5
2067 Female, age 85, both hemispheres 17.8
Pontine nuclei
nTPM: 19.7
2454 Male, age 74, left hemisphere 27.3
2319 Female, age 91, both hemispheres 26.1
2115 Male, age 80, left hemisphere 21.8
2109 Female, age 72, unknown 20.8
2727 Male, age 61, right hemisphere 16.7
1968 Male, age 76, left hemisphere 16.4
1863 Male, age 55, unknown 15.4
2787 Female, age 85, both hemispheres 13.3
Pontine raphe nucleus
nTPM: 16.0
2853 Male, age 76, midline 17.1
2122 Female, age 85, midline 14.9
Posteroventral cochlear nucleus
nTPM: 23.2
2135 Female, age 91, both hemispheres 33.8
2341 Male, age 80, both hemispheres 27.6
2070 Male, age 76, both hemispheres 19.1
2371 Male, age 61, both hemispheres 18.1
2752 Female, age 85, both hemispheres 17.4
Prepositus hypoglossal nucleus
nTPM: 21.4
2855 Female, age 85, right hemisphere 24.8
2086 Male, age 80, both hemispheres 18.1
Principal sensory trigeminal nucleus
nTPM: 17.7
2367 Female, age 91, left hemisphere 26.4
2008 Male, age 80, left hemisphere 17.1
2324 Male, age 76, both hemispheres 15.1
2158 Male, age 61, both hemispheres 12.3
Reticular pontine nucleus, caudal
nTPM: 19.4
2559 Male, age 74, both hemispheres 24.9
2457 Female, age 91, both hemispheres 22.3
2092 Male, age 76, both hemispheres 15.9
2332 Male, age 80, right hemisphere 14.6
Reticular pontine nucleus, oral
nTPM: 21.2
2366 Female, age 91, both hemispheres 24.6
2361 Male, age 74, both hemispheres 22.6
1939 Male, age 80, both hemispheres 21.0
2012 Female, age 85, both hemispheres 19.6
2167 Male, age 76, both hemispheres 18.3
Reticulotegmental nucleus
nTPM: 16.9
2322 Female, age 91, both hemispheres 17.7
2452 Male, age 74, both hemispheres 17.5
2333 Male, age 80, both hemispheres 17.1
2325 Male, age 76, both hemispheres 15.3
Spinal trigeminal nucleus, caudal
nTPM: 17.7
2312 Male, age 61, both hemispheres 21.7
2308 Male, age 80, both hemispheres 18.2
2447 Male, age 76, both hemispheres 17.7
2390 Female, age 91, both hemispheres 16.8
2642 Male, age 74, both hemispheres 14.2
Spinal trigeminal nucleus, interpolar
nTPM: 17.0
2033 Male, age 80, both hemispheres 19.1
2386 Female, age 85, both hemispheres 18.2
2066 Male, age 76, right hemisphere 16.9
2389 Female, age 91, both hemispheres 16.0
2625 Male, age 61, both hemispheres 14.6
Spinal trigeminal nucleus, oral
nTPM: 16.3
2164 Male, age 80, both hemispheres 17.6
2737 Female, age 85, both hemispheres 16.7
1978 Male, age 76, both hemispheres 14.7
Spinal vestibular nucleus
nTPM: 19.1
2806 Female, age 85, both hemispheres 24.2
2384 Male, age 74, both hemispheres 19.8
2186 Female, age 91, both hemispheres 18.5
2748 Male, age 76, both hemispheres 18.3
2780 Male, age 80, both hemispheres 17.8
2796 Male, age 61, both hemispheres 15.8
Subcoeruleus area
nTPM: 18.0
2369 Female, age 85, left hemisphere 28.8
1958 Male, age 80, both hemispheres 16.9
2089 Male, age 76, left hemisphere 16.3
2323 Female, age 91, left hemisphere 14.4
2451 Male, age 74, both hemispheres 13.8
Superior olive
nTPM: 20.6
2364 Male, age 74, right hemisphere 23.7
2561 Female, age 91, both hemispheres 22.8
2329 Male, age 80, right hemisphere 19.7
1875 Female, age 85, both hemispheres 18.7
2020 Male, age 76, both hemispheres 18.0
Superior vestibular nucleus
nTPM: 17.2
2015 Male, age 80, both hemispheres 19.2
2383 Male, age 74, both hemispheres 16.2
2061 Male, age 76, both hemispheres 16.1
Ventral medullary reticular nucleus
nTPM: 20.2
2372 Male, age 61, both hemispheres 21.8
2060 Male, age 76, both hemispheres 18.6
Ventral periolivary nuclei
nTPM: 18.0
2794 Female, age 91, left hemisphere 21.0
2023 Male, age 76, both hemispheres 20.4
2165 Male, age 80, both hemispheres 16.3
2130 Female, age 85, both hemispheres 14.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 20.1
2118 Male, age 80, both hemispheres 23.9
2180 Male, age 61, both hemispheres 20.6
2741 Female, age 85, both hemispheres 19.6
2302 Female, age 91, both hemispheres 18.4
1986 Male, age 76, both hemispheres 17.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 20.6
2359 Male, age 61, both hemispheres 23.7
2840 Female, age 85, both hemispheres 23.4
2456 Female, age 91, both hemispheres 22.6
2449 Male, age 74, both hemispheres 19.7
2161 Male, age 80, both hemispheres 18.7
1959 Male, age 76, both hemispheres 15.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 42.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 31.4
FF:10182-103D2 60 years, female 31.5
FF:10165-103B3 76 years, female 31.4
Medulla oblongata
Scaled Tags Per Million: 35.5
FF:10038-101F2 18-64 years, mixed 48.1
FF:10155-103A2 76 years, female 34.1
FF:10174-103C3 60 years, female 24.4
Pons
Scaled Tags Per Million: 42.7
FF:10033-101E6 18-54 years, mixed 42.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 28.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 28.5
Samples: 4

Max nTPM: 31.9
Min nTPM: 23.9
Sample A Female 26.9
Sample B Female 23.9
Sample C Male 31.2
Sample D Male 31.9
Pons
nTPM: 24.0
Samples: 4

Max nTPM: 27.4
Min nTPM: 20.9
Sample A Female 20.9
Sample B Female 23.1
Sample C Male 24.6
Sample D Male 27.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 7.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 7.8
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.8
Sample A Male 6.8
Sample B Male 8.1
Sample C Female 7.3
Sample D Female 9.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
78534504 Antisense, RP_070620_01_A11, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 0.1
78534504 Antisense, RP_070620_01_A11, Mouse strain C57BL/6J (56 days, male) 0.1

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