PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:21.5 nTPM
FANTOM5:14.4 Scaled Tags Per Million
Pig:12.4 nTPM
Mouse:4.0 nTPM
Allen mouse:1.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 21.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 18.5
2090 Male, age 80, both hemispheres 22.1
2188 Female, age 91, both hemispheres 18.6
2301 Female, age 85, both hemispheres 17.1
1984 Male, age 76, both hemispheres 16.1
Area postrema
nTPM: 20.7
2799 Male, age 61, both hemispheres 24.7
2306 Male, age 80, both hemispheres 24.0
2054 Male, age 76, both hemispheres 13.5
Dorsal cochlear nucleus
nTPM: 17.1
2378 Male, age 80, both hemispheres 17.7
2370 Male, age 61, both hemispheres 17.6
2802 Male, age 74, right hemisphere 17.5
2187 Female, age 91, both hemispheres 17.1
2058 Male, age 76, both hemispheres 15.6
Dorsal medullary reticular nucleus
nTPM: 17.3
2373 Male, age 61, both hemispheres 17.8
2088 Male, age 76, both hemispheres 17.4
2040 Female, age 85, both hemispheres 16.6
Dorsal motor vagal complex
nTPM: 18.0
2797 Male, age 61, both hemispheres 22.9
2185 Male, age 76, both hemispheres 18.9
2643 Male, age 74, both hemispheres 18.6
2844 Male, age 55, unknown 17.6
2000 Male, age 74, unknown 17.4
2807 Female, age 85, both hemispheres 16.9
2813 Female, age 72, unknown 16.7
2133 Female, age 91, both hemispheres 14.6
Dorsal tegmental nucleus
nTPM: 17.5
2358 Male, age 61, both hemispheres 19.5
2083 Male, age 80, both hemispheres 17.6
1936 Male, age 76, left hemisphere 16.4
2326 Male, age 74, both hemispheres 16.4
Dorsolateral tegmental area
nTPM: 18.2
2337 Male, age 61, both hemispheres 23.0
2654 Male, age 80, both hemispheres 17.9
2751 Female, age 85, both hemispheres 17.9
2360 Male, age 74, both hemispheres 16.3
2141 Male, age 76, both hemispheres 15.7
Gigantocellular reticular nuclei, medullary
nTPM: 16.5
2314 Male, age 61, both hemispheres 19.0
1876 Female, age 85, both hemispheres 17.1
2310 Male, age 80, both hemispheres 16.9
2387 Female, age 91, both hemispheres 16.9
2462 Male, age 74, both hemispheres 15.6
2022 Male, age 76, right hemisphere 13.6
Gigantocellular reticular nuclei, pars
nTPM: 16.9
2706 Male, age 80, both hemispheres 19.7
2330 Male, age 80, both hemispheres 18.1
2336 Male, age 61, both hemispheres 17.6
2084 Female, age 85, both hemispheres 15.6
2168 Male, age 76, both hemispheres 13.6
Inferior olive
nTPM: 18.9
2178 Male, age 61, both hemispheres 21.1
2379 Male, age 80, both hemispheres 19.6
2563 Male, age 74, both hemispheres 18.8
2085 Female, age 85, both hemispheres 17.8
2628 Female, age 91, both hemispheres 17.4
Kolliker-Fuse nucleus
nTPM: 17.2
2793 Female, age 91, left hemisphere 21.0
2315 Male, age 76, right hemisphere 16.1
2163 Male, age 80, both hemispheres 14.6
Lateral lemniscal nuclei
nTPM: 17.1
2320 Female, age 91, left hemisphere 19.7
2036 Male, age 80, both hemispheres 17.2
2453 Male, age 74, right hemisphere 17.0
2746 Female, age 85, left hemisphere 16.8
2169 Male, age 76, both hemispheres 14.6
Lateral medullary reticular nucleus
nTPM: 18.7
2852 Male, age 80, both hemispheres 23.4
2374 Male, age 61, both hemispheres 20.8
2305 Male, age 74, both hemispheres 18.6
2190 Female, age 85, both hemispheres 18.3
2804 Female, age 91, both hemispheres 17.7
2044 Male, age 76, both hemispheres 13.2
Lateral parabrachial nucleus
nTPM: 18.0
2790 Male, age 61, both hemispheres 20.0
2013 Male, age 80, both hemispheres 18.7
2792 Male, age 76, both hemispheres 17.1
2139 Female, age 85, right hemisphere 16.0
Lateral vestibular nucleus
nTPM: 16.3
2311 Male, age 80, both hemispheres 18.2
2184 Male, age 76, both hemispheres 14.4
Locus coeruleus
nTPM: 14.9
2162 Male, age 80, both hemispheres 16.6
1980 Male, age 76, both hemispheres 15.9
2317 Female, age 72, unknown 15.6
2123 Female, age 91, both hemispheres 14.6
2720 Male, age 74, both hemispheres 14.6
2014 Male, age 55, unknown 14.3
2788 Male, age 74, unknown 12.4
Medial olivary nucleus
nTPM: 19.3
2851 Male, age 80, both hemispheres 20.4
1943 Male, age 61, both hemispheres 19.6
1962 Male, age 76, both hemispheres 18.6
2138 Female, age 91, both hemispheres 18.6
Medial parabrachial nucleus
nTPM: 17.2
2170 Female, age 91, both hemispheres 18.3
2463 Female, age 85, right hemisphere 18.1
2156 Male, age 61, both hemispheres 17.4
2786 Male, age 76, both hemispheres 16.9
2854 Male, age 80, both hemispheres 15.6
Medial periolivary nuclei
nTPM: 16.1
2081 Male, age 80, both hemispheres 18.3
2458 Female, age 91, both hemispheres 18.3
2791 Male, age 74, right hemisphere 17.7
2171 Female, age 85, both hemispheres 13.9
2063 Male, age 76, both hemispheres 12.5
Medial vestibular nucleus
nTPM: 16.5
2801 Male, age 74, both hemispheres 19.0
2624 Male, age 61, both hemispheres 17.6
2093 Male, age 80, both hemispheres 16.9
2803 Female, age 91, both hemispheres 16.8
2743 Female, age 85, both hemispheres 15.8
2134 Male, age 76, both hemispheres 12.8
Motor facial nucleus
nTPM: 16.6
2697 Female, age 85, both hemispheres 18.3
2365 Male, age 74, right hemisphere 17.6
2795 Female, age 91, both hemispheres 17.4
2327 Male, age 80, both hemispheres 16.9
2126 Male, age 61, both hemispheres 15.9
2062 Male, age 76, both hemispheres 13.7
Motor hypoglossal nucleus
nTPM: 17.2
2182 Male, age 80, both hemispheres 22.0
2125 Female, age 91, both hemispheres 17.6
2132 Female, age 85, both hemispheres 16.8
2277 Male, age 76, both hemispheres 15.4
2461 Male, age 61, both hemispheres 14.1
Motor trigeminal nucleus
nTPM: 17.7
2560 Male, age 74, both hemispheres 19.3
2321 Female, age 91, both hemispheres 19.1
2335 Male, age 61, both hemispheres 17.5
2079 Male, age 80, both hemispheres 16.9
2309 Male, age 76, both hemispheres 15.9
Nuclei of the trapezoid body
nTPM: 14.9
2368 Female, age 91, both hemispheres 17.2
2166 Male, age 80, both hemispheres 17.1
2735 Female, age 85, both hemispheres 13.9
1983 Male, age 76, both hemispheres 13.1
2159 Male, age 61, both hemispheres 13.1
Nucleus ambiguus
nTPM: 19.3
2096 Female, age 85, both hemispheres 22.2
2071 Male, age 76, both hemispheres 16.3
Nucleus cuneatus
nTPM: 19.8
2380 Male, age 80, both hemispheres 23.5
2808 Female, age 85, both hemispheres 21.3
2562 Male, age 61, both hemispheres 20.5
2381 Male, age 80, both hemispheres 20.4
2376 Male, age 61, both hemispheres 19.2
2805 Female, age 91, both hemispheres 18.6
2564 Male, age 74, both hemispheres 18.5
2100 Male, age 76, both hemispheres 18.2
2131 Male, age 76, both hemispheres 18.0
Nucleus gracilis
nTPM: 21.5
2382 Male, age 80, both hemispheres 23.6
2299 Female, age 85, both hemispheres 21.8
2627 Male, age 74, both hemispheres 19.2
Nucleus raphe magnus
nTPM: 14.7
2328 Male, age 80, both hemispheres 16.3
2459 Female, age 91, both hemispheres 16.0
2455 Male, age 74, both hemispheres 15.4
2051 Male, age 76, both hemispheres 14.5
2172 Female, age 85, both hemispheres 13.3
2160 Male, age 61, both hemispheres 12.4
Nucleus raphe obscurus
nTPM: 19.9
2845 Female, age 85, midline 20.9
2800 Male, age 61, midline 19.8
2142 Male, age 76, midline 19.0
Nucleus raphe pallidus
nTPM: 19.9
1924 Male, age 61, midline 21.6
2145 Male, age 76, midline 20.3
2183 Male, age 80, midline 17.7
Nucleus tractus solitarii
nTPM: 15.7
2307 Male, age 80, both hemispheres 18.6
2191 Female, age 85, both hemispheres 17.5
2656 Male, age 76, both hemispheres 16.7
2144 Female, age 91, right hemisphere 10.0
Paramedian reticular nucleus
nTPM: 15.6
2057 Male, age 80, both hemispheres 16.8
2050 Female, age 85, both hemispheres 15.6
2313 Male, age 61, both hemispheres 15.5
2052 Male, age 76, both hemispheres 14.5
Parvicellular reticular nuclei
nTPM: 16.9
2558 Male, age 74, both hemispheres 18.2
2119 Male, age 80, both hemispheres 17.0
2095 Male, age 76, both hemispheres 15.4
Parvicellular reticular nuclei, medullary
nTPM: 16.1
2189 Female, age 91, both hemispheres 16.9
2091 Female, age 85, both hemispheres 16.0
2181 Male, age 80, left hemisphere 15.4
Pedunculopontine tegmental nucleus
nTPM: 16.3
2338 Male, age 61, both hemispheres 16.8
1921 Female, age 85, both hemispheres 16.3
2334 Male, age 80, both hemispheres 15.8
Peritrigeminal nucleus
nTPM: 16.6
2067 Female, age 85, both hemispheres 18.7
2136 Male, age 76, both hemispheres 15.7
2179 Male, age 61, both hemispheres 15.5
Pontine nuclei
nTPM: 16.6
2319 Female, age 91, both hemispheres 20.1
2454 Male, age 74, left hemisphere 18.2
2115 Male, age 80, left hemisphere 17.8
2787 Female, age 85, both hemispheres 16.9
2109 Female, age 72, unknown 16.7
1968 Male, age 76, left hemisphere 15.2
1863 Male, age 55, unknown 15.1
2727 Male, age 61, right hemisphere 13.0
Pontine raphe nucleus
nTPM: 15.6
2853 Male, age 76, midline 16.1
2122 Female, age 85, midline 15.1
Posteroventral cochlear nucleus
nTPM: 16.9
2135 Female, age 91, both hemispheres 20.2
2341 Male, age 80, both hemispheres 18.9
2371 Male, age 61, both hemispheres 16.2
2070 Male, age 76, both hemispheres 15.0
2752 Female, age 85, both hemispheres 14.0
Prepositus hypoglossal nucleus
nTPM: 17.4
2855 Female, age 85, right hemisphere 18.1
2086 Male, age 80, both hemispheres 16.7
Principal sensory trigeminal nucleus
nTPM: 15.7
2367 Female, age 91, left hemisphere 18.8
2008 Male, age 80, left hemisphere 15.4
2324 Male, age 76, both hemispheres 15.0
2158 Male, age 61, both hemispheres 13.5
Reticular pontine nucleus, caudal
nTPM: 16.9
2559 Male, age 74, both hemispheres 18.3
2457 Female, age 91, both hemispheres 17.1
2332 Male, age 80, right hemisphere 17.0
2092 Male, age 76, both hemispheres 15.5
Reticular pontine nucleus, oral
nTPM: 16.7
2366 Female, age 91, both hemispheres 19.8
2012 Female, age 85, both hemispheres 17.1
1939 Male, age 80, both hemispheres 16.1
2167 Male, age 76, both hemispheres 15.9
2361 Male, age 74, both hemispheres 14.6
Reticulotegmental nucleus
nTPM: 16.0
2452 Male, age 74, both hemispheres 17.8
2322 Female, age 91, both hemispheres 16.5
2333 Male, age 80, both hemispheres 16.0
2325 Male, age 76, both hemispheres 13.7
Spinal trigeminal nucleus, caudal
nTPM: 17.3
2308 Male, age 80, both hemispheres 18.9
2312 Male, age 61, both hemispheres 18.4
2642 Male, age 74, both hemispheres 18.4
2447 Male, age 76, both hemispheres 16.3
2390 Female, age 91, both hemispheres 14.6
Spinal trigeminal nucleus, interpolar
nTPM: 14.3
2386 Female, age 85, both hemispheres 15.2
2033 Male, age 80, both hemispheres 15.0
2389 Female, age 91, both hemispheres 15.0
2625 Male, age 61, both hemispheres 14.5
2066 Male, age 76, right hemisphere 11.7
Spinal trigeminal nucleus, oral
nTPM: 16.4
1978 Male, age 76, both hemispheres 17.2
2164 Male, age 80, both hemispheres 16.8
2737 Female, age 85, both hemispheres 15.1
Spinal vestibular nucleus
nTPM: 17.1
2796 Male, age 61, both hemispheres 18.8
2384 Male, age 74, both hemispheres 17.9
2806 Female, age 85, both hemispheres 17.4
2780 Male, age 80, both hemispheres 16.7
2186 Female, age 91, both hemispheres 15.8
2748 Male, age 76, both hemispheres 15.8
Subcoeruleus area
nTPM: 16.3
2369 Female, age 85, left hemisphere 20.6
2323 Female, age 91, left hemisphere 15.8
2089 Male, age 76, left hemisphere 15.2
1958 Male, age 80, both hemispheres 14.9
2451 Male, age 74, both hemispheres 14.8
Superior olive
nTPM: 16.0
2329 Male, age 80, right hemisphere 17.5
2561 Female, age 91, both hemispheres 16.4
1875 Female, age 85, both hemispheres 15.6
2020 Male, age 76, both hemispheres 15.6
2364 Male, age 74, right hemisphere 14.6
Superior vestibular nucleus
nTPM: 16.8
2383 Male, age 74, both hemispheres 17.5
2061 Male, age 76, both hemispheres 16.8
2015 Male, age 80, both hemispheres 16.0
Ventral medullary reticular nucleus
nTPM: 17.5
2372 Male, age 61, both hemispheres 17.9
2060 Male, age 76, both hemispheres 17.2
Ventral periolivary nuclei
nTPM: 15.5
2794 Female, age 91, left hemisphere 15.8
2130 Female, age 85, both hemispheres 15.7
2023 Male, age 76, both hemispheres 15.2
2165 Male, age 80, both hemispheres 15.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 17.2
2118 Male, age 80, both hemispheres 21.3
2180 Male, age 61, both hemispheres 17.9
2302 Female, age 91, both hemispheres 17.0
2741 Female, age 85, both hemispheres 15.2
1986 Male, age 76, both hemispheres 14.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 16.9
2456 Female, age 91, both hemispheres 18.8
2359 Male, age 61, both hemispheres 18.0
2840 Female, age 85, both hemispheres 17.4
2161 Male, age 80, both hemispheres 16.7
2449 Male, age 74, both hemispheres 16.0
1959 Male, age 76, both hemispheres 14.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 14.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 13.6
FF:10165-103B3 76 years, female 17.1
FF:10182-103D2 60 years, female 10.1
Medulla oblongata
Scaled Tags Per Million: 14.4
FF:10155-103A2 76 years, female 17.4
FF:10038-101F2 18-64 years, mixed 16.6
FF:10174-103C3 60 years, female 9.3
Pons
Scaled Tags Per Million: 11.5
FF:10033-101E6 18-54 years, mixed 11.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 12.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 12.5
Samples: 4

Max nTPM: 15.7
Min nTPM: 10.3
Sample A Female 10.3
Sample B Female 10.6
Sample C Male 13.2
Sample D Male 15.7
Pons
nTPM: 10.0
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.2
Sample A Female 9.2
Sample B Female 9.2
Sample C Male 9.5
Sample D Male 12.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 4.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 4.0
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.4
Sample A Male 5.2
Sample B Male 3.6
Sample C Female 3.4
Sample D Female 3.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.8
68798831 Antisense, RP_050217_01_D06, Mouse strain C57BL/6J (56 days, male) 3.2
112649476 Antisense, RP_090724_02_D02, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 1.6
68798831 Antisense, RP_050217_01_D06, Mouse strain C57BL/6J (56 days, male) 2.8
112649476 Antisense, RP_090724_02_D02, Mouse strain C57BL/6J (56 days, male) 0.4

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