PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:15.7 nTPM
FANTOM5:0.4 Scaled Tags Per Million
Pig:3.6 nTPM
Mouse:0.1 nTPM
Allen mouse:1.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 15.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 13.6
2301 Female, age 85, both hemispheres 16.8
2090 Male, age 80, both hemispheres 12.9
1984 Male, age 76, both hemispheres 12.3
2188 Female, age 91, both hemispheres 12.3
Area postrema
nTPM: 15.5
2306 Male, age 80, both hemispheres 17.5
2799 Male, age 61, both hemispheres 16.5
2054 Male, age 76, both hemispheres 12.5
Dorsal cochlear nucleus
nTPM: 12.4
2058 Male, age 76, both hemispheres 14.8
2378 Male, age 80, both hemispheres 13.3
2370 Male, age 61, both hemispheres 12.0
2802 Male, age 74, right hemisphere 11.0
2187 Female, age 91, both hemispheres 10.8
Dorsal medullary reticular nucleus
nTPM: 11.8
2088 Male, age 76, both hemispheres 12.6
2373 Male, age 61, both hemispheres 12.4
2040 Female, age 85, both hemispheres 10.5
Dorsal motor vagal complex
nTPM: 11.8
2185 Male, age 76, both hemispheres 16.6
2807 Female, age 85, both hemispheres 13.8
2813 Female, age 72, unknown 12.6
2797 Male, age 61, both hemispheres 11.7
2844 Male, age 55, unknown 11.1
2000 Male, age 74, unknown 10.9
2133 Female, age 91, both hemispheres 9.4
2643 Male, age 74, both hemispheres 8.4
Dorsal tegmental nucleus
nTPM: 11.4
1936 Male, age 76, left hemisphere 15.7
2326 Male, age 74, both hemispheres 13.4
2083 Male, age 80, both hemispheres 8.7
2358 Male, age 61, both hemispheres 7.9
Dorsolateral tegmental area
nTPM: 11.3
2360 Male, age 74, both hemispheres 13.7
2751 Female, age 85, both hemispheres 12.2
2337 Male, age 61, both hemispheres 11.7
2141 Male, age 76, both hemispheres 11.6
2654 Male, age 80, both hemispheres 7.2
Gigantocellular reticular nuclei, medullary
nTPM: 12.5
2314 Male, age 61, both hemispheres 15.4
2310 Male, age 80, both hemispheres 15.3
2022 Male, age 76, right hemisphere 14.2
2387 Female, age 91, both hemispheres 11.0
2462 Male, age 74, both hemispheres 10.2
1876 Female, age 85, both hemispheres 9.0
Gigantocellular reticular nuclei, pars
nTPM: 12.0
2330 Male, age 80, both hemispheres 15.8
2168 Male, age 76, both hemispheres 11.9
2336 Male, age 61, both hemispheres 11.7
2084 Female, age 85, both hemispheres 10.3
2706 Male, age 80, both hemispheres 10.2
Inferior olive
nTPM: 10.5
2178 Male, age 61, both hemispheres 13.4
2379 Male, age 80, both hemispheres 11.4
2085 Female, age 85, both hemispheres 11.3
2563 Male, age 74, both hemispheres 8.5
2628 Female, age 91, both hemispheres 8.0
Kolliker-Fuse nucleus
nTPM: 11.1
2315 Male, age 76, right hemisphere 12.5
2793 Female, age 91, left hemisphere 10.8
2163 Male, age 80, both hemispheres 10.1
Lateral lemniscal nuclei
nTPM: 13.0
2036 Male, age 80, both hemispheres 14.6
2320 Female, age 91, left hemisphere 14.5
2746 Female, age 85, left hemisphere 13.7
2453 Male, age 74, right hemisphere 13.3
2169 Male, age 76, both hemispheres 9.1
Lateral medullary reticular nucleus
nTPM: 12.2
2305 Male, age 74, both hemispheres 13.7
2190 Female, age 85, both hemispheres 13.1
2374 Male, age 61, both hemispheres 12.7
2852 Male, age 80, both hemispheres 11.6
2044 Male, age 76, both hemispheres 11.4
2804 Female, age 91, both hemispheres 10.7
Lateral parabrachial nucleus
nTPM: 11.4
2792 Male, age 76, both hemispheres 13.5
2013 Male, age 80, both hemispheres 12.3
2790 Male, age 61, both hemispheres 12.3
2139 Female, age 85, right hemisphere 7.4
Lateral vestibular nucleus
nTPM: 13.4
2311 Male, age 80, both hemispheres 13.5
2184 Male, age 76, both hemispheres 13.3
Locus coeruleus
nTPM: 9.4
2162 Male, age 80, both hemispheres 11.4
2317 Female, age 72, unknown 10.9
1980 Male, age 76, both hemispheres 10.2
2014 Male, age 55, unknown 10.1
2720 Male, age 74, both hemispheres 9.3
2788 Male, age 74, unknown 8.3
2123 Female, age 91, both hemispheres 5.6
Medial olivary nucleus
nTPM: 12.4
1943 Male, age 61, both hemispheres 16.1
2138 Female, age 91, both hemispheres 11.8
1962 Male, age 76, both hemispheres 11.5
2851 Male, age 80, both hemispheres 10.3
Medial parabrachial nucleus
nTPM: 11.2
2156 Male, age 61, both hemispheres 13.8
2786 Male, age 76, both hemispheres 12.2
2170 Female, age 91, both hemispheres 11.4
2463 Female, age 85, right hemisphere 9.6
2854 Male, age 80, both hemispheres 8.9
Medial periolivary nuclei
nTPM: 12.4
2458 Female, age 91, both hemispheres 17.4
2081 Male, age 80, both hemispheres 16.3
2171 Female, age 85, both hemispheres 11.7
2791 Male, age 74, right hemisphere 9.6
2063 Male, age 76, both hemispheres 6.8
Medial vestibular nucleus
nTPM: 10.0
2134 Male, age 76, both hemispheres 11.2
2743 Female, age 85, both hemispheres 11.0
2801 Male, age 74, both hemispheres 10.1
2803 Female, age 91, both hemispheres 9.7
2093 Male, age 80, both hemispheres 9.3
2624 Male, age 61, both hemispheres 9.0
Motor facial nucleus
nTPM: 12.7
2327 Male, age 80, both hemispheres 17.3
2126 Male, age 61, both hemispheres 14.3
2365 Male, age 74, right hemisphere 11.7
2697 Female, age 85, both hemispheres 11.7
2062 Male, age 76, both hemispheres 10.5
2795 Female, age 91, both hemispheres 10.5
Motor hypoglossal nucleus
nTPM: 10.6
2277 Male, age 76, both hemispheres 14.1
2182 Male, age 80, both hemispheres 11.4
2125 Female, age 91, both hemispheres 9.6
2132 Female, age 85, both hemispheres 9.5
2461 Male, age 61, both hemispheres 8.2
Motor trigeminal nucleus
nTPM: 12.7
2321 Female, age 91, both hemispheres 15.5
2335 Male, age 61, both hemispheres 14.1
2309 Male, age 76, both hemispheres 12.8
2079 Male, age 80, both hemispheres 10.7
2560 Male, age 74, both hemispheres 10.5
Nuclei of the trapezoid body
nTPM: 12.2
2368 Female, age 91, both hemispheres 15.6
2166 Male, age 80, both hemispheres 12.3
2159 Male, age 61, both hemispheres 11.3
2735 Female, age 85, both hemispheres 11.2
1983 Male, age 76, both hemispheres 10.7
Nucleus ambiguus
nTPM: 12.1
2071 Male, age 76, both hemispheres 13.3
2096 Female, age 85, both hemispheres 10.8
Nucleus cuneatus
nTPM: 12.1
2100 Male, age 76, both hemispheres 14.1
2376 Male, age 61, both hemispheres 13.7
2808 Female, age 85, both hemispheres 13.5
2381 Male, age 80, both hemispheres 12.9
2805 Female, age 91, both hemispheres 12.5
2131 Male, age 76, both hemispheres 12.3
2380 Male, age 80, both hemispheres 10.8
2564 Male, age 74, both hemispheres 10.0
2562 Male, age 61, both hemispheres 9.5
Nucleus gracilis
nTPM: 15.7
2299 Female, age 85, both hemispheres 20.4
2382 Male, age 80, both hemispheres 14.8
2627 Male, age 74, both hemispheres 12.0
Nucleus raphe magnus
nTPM: 12.0
2328 Male, age 80, both hemispheres 14.7
2459 Female, age 91, both hemispheres 14.4
2455 Male, age 74, both hemispheres 12.3
2172 Female, age 85, both hemispheres 12.2
2160 Male, age 61, both hemispheres 9.4
2051 Male, age 76, both hemispheres 8.8
Nucleus raphe obscurus
nTPM: 12.5
2142 Male, age 76, midline 16.0
2800 Male, age 61, midline 11.5
2845 Female, age 85, midline 10.0
Nucleus raphe pallidus
nTPM: 11.8
2145 Male, age 76, midline 14.6
1924 Male, age 61, midline 11.6
2183 Male, age 80, midline 9.0
Nucleus tractus solitarii
nTPM: 10.9
2191 Female, age 85, both hemispheres 13.9
2307 Male, age 80, both hemispheres 12.4
2656 Male, age 76, both hemispheres 11.2
2144 Female, age 91, right hemisphere 6.2
Paramedian reticular nucleus
nTPM: 10.2
2057 Male, age 80, both hemispheres 11.0
2313 Male, age 61, both hemispheres 11.0
2050 Female, age 85, both hemispheres 10.6
2052 Male, age 76, both hemispheres 8.4
Parvicellular reticular nuclei
nTPM: 11.6
2558 Male, age 74, both hemispheres 12.3
2095 Male, age 76, both hemispheres 11.6
2119 Male, age 80, both hemispheres 11.0
Parvicellular reticular nuclei, medullary
nTPM: 10.7
2181 Male, age 80, left hemisphere 11.9
2091 Female, age 85, both hemispheres 10.8
2189 Female, age 91, both hemispheres 9.3
Pedunculopontine tegmental nucleus
nTPM: 12.1
2338 Male, age 61, both hemispheres 14.2
2334 Male, age 80, both hemispheres 12.2
1921 Female, age 85, both hemispheres 10.1
Peritrigeminal nucleus
nTPM: 10.3
2179 Male, age 61, both hemispheres 11.9
2136 Male, age 76, both hemispheres 11.1
2067 Female, age 85, both hemispheres 8.1
Pontine nuclei
nTPM: 10.9
2319 Female, age 91, both hemispheres 15.4
2454 Male, age 74, left hemisphere 13.4
2115 Male, age 80, left hemisphere 12.8
2727 Male, age 61, right hemisphere 11.4
1863 Male, age 55, unknown 10.0
1968 Male, age 76, left hemisphere 10.0
2109 Female, age 72, unknown 9.8
2787 Female, age 85, both hemispheres 4.7
Pontine raphe nucleus
nTPM: 10.1
2853 Male, age 76, midline 11.2
2122 Female, age 85, midline 9.1
Posteroventral cochlear nucleus
nTPM: 12.9
2135 Female, age 91, both hemispheres 15.1
2371 Male, age 61, both hemispheres 14.2
2341 Male, age 80, both hemispheres 13.1
2070 Male, age 76, both hemispheres 12.0
2752 Female, age 85, both hemispheres 10.0
Prepositus hypoglossal nucleus
nTPM: 10.2
2086 Male, age 80, both hemispheres 13.2
2855 Female, age 85, right hemisphere 7.3
Principal sensory trigeminal nucleus
nTPM: 12.7
2367 Female, age 91, left hemisphere 15.4
2324 Male, age 76, both hemispheres 14.4
2008 Male, age 80, left hemisphere 11.2
2158 Male, age 61, both hemispheres 9.8
Reticular pontine nucleus, caudal
nTPM: 11.8
2332 Male, age 80, right hemisphere 13.8
2457 Female, age 91, both hemispheres 13.4
2559 Male, age 74, both hemispheres 11.5
2092 Male, age 76, both hemispheres 8.4
Reticular pontine nucleus, oral
nTPM: 10.1
2366 Female, age 91, both hemispheres 13.7
2012 Female, age 85, both hemispheres 13.2
2167 Male, age 76, both hemispheres 10.0
1939 Male, age 80, both hemispheres 9.4
2361 Male, age 74, both hemispheres 4.2
Reticulotegmental nucleus
nTPM: 14.6
2452 Male, age 74, both hemispheres 16.1
2322 Female, age 91, both hemispheres 14.8
2333 Male, age 80, both hemispheres 14.8
2325 Male, age 76, both hemispheres 12.9
Spinal trigeminal nucleus, caudal
nTPM: 12.5
2308 Male, age 80, both hemispheres 15.4
2312 Male, age 61, both hemispheres 13.3
2447 Male, age 76, both hemispheres 12.4
2642 Male, age 74, both hemispheres 12.0
2390 Female, age 91, both hemispheres 9.2
Spinal trigeminal nucleus, interpolar
nTPM: 9.9
2066 Male, age 76, right hemisphere 11.5
2389 Female, age 91, both hemispheres 10.5
2386 Female, age 85, both hemispheres 10.1
2033 Male, age 80, both hemispheres 9.8
2625 Male, age 61, both hemispheres 7.5
Spinal trigeminal nucleus, oral
nTPM: 11.7
1978 Male, age 76, both hemispheres 14.1
2737 Female, age 85, both hemispheres 10.9
2164 Male, age 80, both hemispheres 9.9
Spinal vestibular nucleus
nTPM: 11.2
2384 Male, age 74, both hemispheres 12.3
2748 Male, age 76, both hemispheres 12.1
2186 Female, age 91, both hemispheres 12.0
2796 Male, age 61, both hemispheres 10.7
2780 Male, age 80, both hemispheres 10.0
2806 Female, age 85, both hemispheres 10.0
Subcoeruleus area
nTPM: 12.7
2451 Male, age 74, both hemispheres 13.9
2323 Female, age 91, left hemisphere 13.6
2089 Male, age 76, left hemisphere 13.5
2369 Female, age 85, left hemisphere 12.4
1958 Male, age 80, both hemispheres 9.9
Superior olive
nTPM: 11.9
2329 Male, age 80, right hemisphere 13.2
2364 Male, age 74, right hemisphere 13.2
2561 Female, age 91, both hemispheres 11.6
2020 Male, age 76, both hemispheres 11.0
1875 Female, age 85, both hemispheres 10.6
Superior vestibular nucleus
nTPM: 11.2
2061 Male, age 76, both hemispheres 12.6
2015 Male, age 80, both hemispheres 11.4
2383 Male, age 74, both hemispheres 9.5
Ventral medullary reticular nucleus
nTPM: 13.8
2372 Male, age 61, both hemispheres 15.0
2060 Male, age 76, both hemispheres 12.5
Ventral periolivary nuclei
nTPM: 13.3
2794 Female, age 91, left hemisphere 14.2
2023 Male, age 76, both hemispheres 13.5
2165 Male, age 80, both hemispheres 13.2
2130 Female, age 85, both hemispheres 12.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 11.4
2302 Female, age 91, both hemispheres 14.1
2180 Male, age 61, both hemispheres 11.5
2118 Male, age 80, both hemispheres 11.1
2741 Female, age 85, both hemispheres 11.1
1986 Male, age 76, both hemispheres 9.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 12.6
2359 Male, age 61, both hemispheres 14.3
1959 Male, age 76, both hemispheres 13.7
2456 Female, age 91, both hemispheres 13.7
2161 Male, age 80, both hemispheres 13.2
2449 Male, age 74, both hemispheres 11.5
2840 Female, age 85, both hemispheres 9.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 0.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 0.0
FF:10165-103B3 76 years, female 0.1
FF:10182-103D2 60 years, female 0.0
Medulla oblongata
Scaled Tags Per Million: 0.4
FF:10155-103A2 76 years, female 0.9
FF:10038-101F2 18-64 years, mixed 0.3
FF:10174-103C3 60 years, female 0.0
Pons
Scaled Tags Per Million: 0.2
FF:10033-101E6 18-54 years, mixed 0.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 3.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2.6
Samples: 4

Max nTPM: 5.2
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 5.2
Sample C Male 1.4
Sample D Male 2.4
Pons
nTPM: 3.6
Samples: 4

Max nTPM: 6.2
Min nTPM: 1.4
Sample A Female 1.5
Sample B Female 5.2
Sample C Male 6.2
Sample D Male 1.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 0.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.1
Sample A Male 0.2
Sample B Male 0.1
Sample C Female 0.1
Sample D Female 0.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.5
393238 Antisense, RP_040804_02_G06, Mouse strain C57BL/6J (56 days, male) 1.5
Pons
Expression energy: 1.4
393238 Antisense, RP_040804_02_G06, Mouse strain C57BL/6J (56 days, male) 1.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org