PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:44.4 nTPM
FANTOM5:45.0 Scaled Tags Per Million
Pig:8.6 nTPM
Mouse:11.6 nTPM
Allen mouse:1.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 44.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 36.5
2301 Female, age 85, both hemispheres 41.0
2090 Male, age 80, both hemispheres 38.4
1984 Male, age 76, both hemispheres 35.7
2188 Female, age 91, both hemispheres 31.0
Area postrema
nTPM: 31.1
2799 Male, age 61, both hemispheres 32.4
2306 Male, age 80, both hemispheres 31.8
2054 Male, age 76, both hemispheres 29.3
Dorsal cochlear nucleus
nTPM: 33.2
2058 Male, age 76, both hemispheres 37.1
2370 Male, age 61, both hemispheres 35.3
2187 Female, age 91, both hemispheres 33.8
2378 Male, age 80, both hemispheres 30.8
2802 Male, age 74, right hemisphere 29.1
Dorsal medullary reticular nucleus
nTPM: 37.6
2088 Male, age 76, both hemispheres 41.1
2373 Male, age 61, both hemispheres 38.9
2040 Female, age 85, both hemispheres 32.9
Dorsal motor vagal complex
nTPM: 30.6
2185 Male, age 76, both hemispheres 34.6
2844 Male, age 55, unknown 31.9
2000 Male, age 74, unknown 31.0
2643 Male, age 74, both hemispheres 30.5
2797 Male, age 61, both hemispheres 30.2
2813 Female, age 72, unknown 29.0
2807 Female, age 85, both hemispheres 28.7
2133 Female, age 91, both hemispheres 28.5
Dorsal tegmental nucleus
nTPM: 35.9
2358 Male, age 61, both hemispheres 41.8
1936 Male, age 76, left hemisphere 35.4
2083 Male, age 80, both hemispheres 33.9
2326 Male, age 74, both hemispheres 32.3
Dorsolateral tegmental area
nTPM: 36.0
2337 Male, age 61, both hemispheres 40.6
2360 Male, age 74, both hemispheres 36.9
2141 Male, age 76, both hemispheres 36.1
2751 Female, age 85, both hemispheres 35.5
2654 Male, age 80, both hemispheres 31.0
Gigantocellular reticular nuclei, medullary
nTPM: 34.3
2310 Male, age 80, both hemispheres 38.0
2314 Male, age 61, both hemispheres 36.9
2462 Male, age 74, both hemispheres 34.0
1876 Female, age 85, both hemispheres 33.0
2022 Male, age 76, right hemisphere 32.6
2387 Female, age 91, both hemispheres 31.5
Gigantocellular reticular nuclei, pars
nTPM: 34.2
2084 Female, age 85, both hemispheres 36.2
2168 Male, age 76, both hemispheres 34.9
2330 Male, age 80, both hemispheres 34.5
2706 Male, age 80, both hemispheres 34.0
2336 Male, age 61, both hemispheres 31.5
Inferior olive
nTPM: 32.6
2178 Male, age 61, both hemispheres 38.1
2563 Male, age 74, both hemispheres 35.4
2628 Female, age 91, both hemispheres 30.9
2085 Female, age 85, both hemispheres 30.1
2379 Male, age 80, both hemispheres 28.4
Kolliker-Fuse nucleus
nTPM: 31.9
2163 Male, age 80, both hemispheres 36.2
2793 Female, age 91, left hemisphere 32.6
2315 Male, age 76, right hemisphere 26.8
Lateral lemniscal nuclei
nTPM: 34.8
2453 Male, age 74, right hemisphere 36.8
2320 Female, age 91, left hemisphere 36.1
2036 Male, age 80, both hemispheres 36.0
2746 Female, age 85, left hemisphere 33.3
2169 Male, age 76, both hemispheres 32.0
Lateral medullary reticular nucleus
nTPM: 34.3
2852 Male, age 80, both hemispheres 41.3
2305 Male, age 74, both hemispheres 35.8
2374 Male, age 61, both hemispheres 34.9
2044 Male, age 76, both hemispheres 32.2
2190 Female, age 85, both hemispheres 31.6
2804 Female, age 91, both hemispheres 30.3
Lateral parabrachial nucleus
nTPM: 32.2
2790 Male, age 61, both hemispheres 38.4
2013 Male, age 80, both hemispheres 34.0
2139 Female, age 85, right hemisphere 29.0
2792 Male, age 76, both hemispheres 27.4
Lateral vestibular nucleus
nTPM: 36.4
2184 Male, age 76, both hemispheres 38.5
2311 Male, age 80, both hemispheres 34.2
Locus coeruleus
nTPM: 27.5
2317 Female, age 72, unknown 33.6
2162 Male, age 80, both hemispheres 29.5
1980 Male, age 76, both hemispheres 29.0
2123 Female, age 91, both hemispheres 28.8
2720 Male, age 74, both hemispheres 26.4
2014 Male, age 55, unknown 24.1
2788 Male, age 74, unknown 21.0
Medial olivary nucleus
nTPM: 34.9
1943 Male, age 61, both hemispheres 38.5
1962 Male, age 76, both hemispheres 37.3
2138 Female, age 91, both hemispheres 33.1
2851 Male, age 80, both hemispheres 30.5
Medial parabrachial nucleus
nTPM: 36.6
2156 Male, age 61, both hemispheres 43.5
2170 Female, age 91, both hemispheres 38.2
2786 Male, age 76, both hemispheres 35.8
2463 Female, age 85, right hemisphere 34.4
2854 Male, age 80, both hemispheres 30.8
Medial periolivary nuclei
nTPM: 35.8
2171 Female, age 85, both hemispheres 39.3
2458 Female, age 91, both hemispheres 36.9
2081 Male, age 80, both hemispheres 36.1
2791 Male, age 74, right hemisphere 34.4
2063 Male, age 76, both hemispheres 32.6
Medial vestibular nucleus
nTPM: 34.8
2093 Male, age 80, both hemispheres 40.3
2624 Male, age 61, both hemispheres 37.9
2801 Male, age 74, both hemispheres 34.7
2743 Female, age 85, both hemispheres 34.5
2134 Male, age 76, both hemispheres 33.3
2803 Female, age 91, both hemispheres 28.3
Motor facial nucleus
nTPM: 35.3
2126 Male, age 61, both hemispheres 38.7
2327 Male, age 80, both hemispheres 38.1
2365 Male, age 74, right hemisphere 35.6
2795 Female, age 91, both hemispheres 34.6
2062 Male, age 76, both hemispheres 32.6
2697 Female, age 85, both hemispheres 32.0
Motor hypoglossal nucleus
nTPM: 35.1
2125 Female, age 91, both hemispheres 41.7
2182 Male, age 80, both hemispheres 40.4
2461 Male, age 61, both hemispheres 33.2
2132 Female, age 85, both hemispheres 31.7
2277 Male, age 76, both hemispheres 28.3
Motor trigeminal nucleus
nTPM: 35.9
2560 Male, age 74, both hemispheres 38.3
2309 Male, age 76, both hemispheres 37.3
2335 Male, age 61, both hemispheres 36.4
2321 Female, age 91, both hemispheres 34.3
2079 Male, age 80, both hemispheres 33.4
Nuclei of the trapezoid body
nTPM: 35.0
2159 Male, age 61, both hemispheres 36.8
2166 Male, age 80, both hemispheres 36.4
2735 Female, age 85, both hemispheres 36.2
2368 Female, age 91, both hemispheres 33.5
1983 Male, age 76, both hemispheres 32.2
Nucleus ambiguus
nTPM: 44.4
2096 Female, age 85, both hemispheres 55.3
2071 Male, age 76, both hemispheres 33.4
Nucleus cuneatus
nTPM: 39.0
2100 Male, age 76, both hemispheres 50.4
2131 Male, age 76, both hemispheres 47.0
2564 Male, age 74, both hemispheres 39.5
2376 Male, age 61, both hemispheres 38.0
2562 Male, age 61, both hemispheres 36.4
2380 Male, age 80, both hemispheres 36.2
2808 Female, age 85, both hemispheres 35.5
2805 Female, age 91, both hemispheres 34.8
2381 Male, age 80, both hemispheres 33.2
Nucleus gracilis
nTPM: 32.4
2299 Female, age 85, both hemispheres 33.3
2382 Male, age 80, both hemispheres 33.0
2627 Male, age 74, both hemispheres 30.8
Nucleus raphe magnus
nTPM: 34.6
2172 Female, age 85, both hemispheres 38.0
2328 Male, age 80, both hemispheres 37.2
2455 Male, age 74, both hemispheres 34.5
2459 Female, age 91, both hemispheres 34.1
2051 Male, age 76, both hemispheres 32.4
2160 Male, age 61, both hemispheres 31.2
Nucleus raphe obscurus
nTPM: 38.3
2142 Male, age 76, midline 41.8
2800 Male, age 61, midline 39.4
2845 Female, age 85, midline 33.5
Nucleus raphe pallidus
nTPM: 40.2
2145 Male, age 76, midline 45.6
1924 Male, age 61, midline 40.9
2183 Male, age 80, midline 34.2
Nucleus tractus solitarii
nTPM: 30.8
2307 Male, age 80, both hemispheres 38.4
2191 Female, age 85, both hemispheres 32.8
2656 Male, age 76, both hemispheres 28.8
2144 Female, age 91, right hemisphere 23.3
Paramedian reticular nucleus
nTPM: 31.1
2057 Male, age 80, both hemispheres 36.5
2050 Female, age 85, both hemispheres 33.8
2313 Male, age 61, both hemispheres 28.4
2052 Male, age 76, both hemispheres 25.8
Parvicellular reticular nuclei
nTPM: 36.7
2558 Male, age 74, both hemispheres 39.6
2095 Male, age 76, both hemispheres 35.3
2119 Male, age 80, both hemispheres 35.2
Parvicellular reticular nuclei, medullary
nTPM: 33.1
2091 Female, age 85, both hemispheres 35.5
2189 Female, age 91, both hemispheres 33.0
2181 Male, age 80, left hemisphere 30.9
Pedunculopontine tegmental nucleus
nTPM: 30.4
2338 Male, age 61, both hemispheres 32.3
1921 Female, age 85, both hemispheres 30.1
2334 Male, age 80, both hemispheres 28.7
Peritrigeminal nucleus
nTPM: 34.8
2179 Male, age 61, both hemispheres 38.3
2067 Female, age 85, both hemispheres 33.8
2136 Male, age 76, both hemispheres 32.4
Pontine nuclei
nTPM: 35.3
2787 Female, age 85, both hemispheres 38.8
2115 Male, age 80, left hemisphere 38.6
2727 Male, age 61, right hemisphere 35.9
1968 Male, age 76, left hemisphere 35.8
2454 Male, age 74, left hemisphere 35.2
2109 Female, age 72, unknown 33.3
1863 Male, age 55, unknown 32.9
2319 Female, age 91, both hemispheres 32.0
Pontine raphe nucleus
nTPM: 35.3
2122 Female, age 85, midline 36.9
2853 Male, age 76, midline 33.6
Posteroventral cochlear nucleus
nTPM: 33.2
2070 Male, age 76, both hemispheres 37.2
2135 Female, age 91, both hemispheres 34.1
2341 Male, age 80, both hemispheres 33.3
2371 Male, age 61, both hemispheres 31.7
2752 Female, age 85, both hemispheres 29.7
Prepositus hypoglossal nucleus
nTPM: 35.8
2086 Male, age 80, both hemispheres 37.2
2855 Female, age 85, right hemisphere 34.3
Principal sensory trigeminal nucleus
nTPM: 34.0
2324 Male, age 76, both hemispheres 39.1
2158 Male, age 61, both hemispheres 36.0
2367 Female, age 91, left hemisphere 31.8
2008 Male, age 80, left hemisphere 29.0
Reticular pontine nucleus, caudal
nTPM: 34.3
2559 Male, age 74, both hemispheres 37.5
2332 Male, age 80, right hemisphere 37.4
2092 Male, age 76, both hemispheres 31.3
2457 Female, age 91, both hemispheres 31.0
Reticular pontine nucleus, oral
nTPM: 32.1
2361 Male, age 74, both hemispheres 36.7
2012 Female, age 85, both hemispheres 32.5
2167 Male, age 76, both hemispheres 32.0
1939 Male, age 80, both hemispheres 30.2
2366 Female, age 91, both hemispheres 29.2
Reticulotegmental nucleus
nTPM: 33.3
2452 Male, age 74, both hemispheres 35.8
2333 Male, age 80, both hemispheres 34.3
2322 Female, age 91, both hemispheres 32.6
2325 Male, age 76, both hemispheres 30.7
Spinal trigeminal nucleus, caudal
nTPM: 35.9
2447 Male, age 76, both hemispheres 40.6
2312 Male, age 61, both hemispheres 38.4
2308 Male, age 80, both hemispheres 37.8
2642 Male, age 74, both hemispheres 33.4
2390 Female, age 91, both hemispheres 29.2
Spinal trigeminal nucleus, interpolar
nTPM: 31.0
2625 Male, age 61, both hemispheres 33.7
2066 Male, age 76, right hemisphere 32.2
2033 Male, age 80, both hemispheres 31.9
2386 Female, age 85, both hemispheres 28.9
2389 Female, age 91, both hemispheres 28.0
Spinal trigeminal nucleus, oral
nTPM: 34.7
2164 Male, age 80, both hemispheres 37.0
2737 Female, age 85, both hemispheres 33.9
1978 Male, age 76, both hemispheres 33.3
Spinal vestibular nucleus
nTPM: 34.2
2384 Male, age 74, both hemispheres 37.1
2748 Male, age 76, both hemispheres 36.6
2780 Male, age 80, both hemispheres 34.3
2186 Female, age 91, both hemispheres 33.2
2796 Male, age 61, both hemispheres 33.0
2806 Female, age 85, both hemispheres 31.1
Subcoeruleus area
nTPM: 33.5
2089 Male, age 76, left hemisphere 37.0
2369 Female, age 85, left hemisphere 36.7
2451 Male, age 74, both hemispheres 33.1
2323 Female, age 91, left hemisphere 30.8
1958 Male, age 80, both hemispheres 29.9
Superior olive
nTPM: 33.6
2329 Male, age 80, right hemisphere 35.5
2364 Male, age 74, right hemisphere 33.8
2020 Male, age 76, both hemispheres 33.5
1875 Female, age 85, both hemispheres 32.8
2561 Female, age 91, both hemispheres 32.6
Superior vestibular nucleus
nTPM: 32.5
2015 Male, age 80, both hemispheres 35.6
2061 Male, age 76, both hemispheres 34.7
2383 Male, age 74, both hemispheres 27.2
Ventral medullary reticular nucleus
nTPM: 37.8
2060 Male, age 76, both hemispheres 41.9
2372 Male, age 61, both hemispheres 33.8
Ventral periolivary nuclei
nTPM: 35.7
2130 Female, age 85, both hemispheres 42.4
2165 Male, age 80, both hemispheres 37.6
2794 Female, age 91, left hemisphere 33.0
2023 Male, age 76, both hemispheres 29.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 33.5
2118 Male, age 80, both hemispheres 38.2
1986 Male, age 76, both hemispheres 35.3
2180 Male, age 61, both hemispheres 31.7
2302 Female, age 91, both hemispheres 31.5
2741 Female, age 85, both hemispheres 30.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 35.0
2456 Female, age 91, both hemispheres 42.0
1959 Male, age 76, both hemispheres 36.4
2449 Male, age 74, both hemispheres 35.9
2359 Male, age 61, both hemispheres 32.8
2840 Female, age 85, both hemispheres 31.8
2161 Male, age 80, both hemispheres 31.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 45.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 45.0
FF:10182-103D2 60 years, female 46.6
FF:10165-103B3 76 years, female 43.4
Medulla oblongata
Scaled Tags Per Million: 44.4
FF:10174-103C3 60 years, female 51.0
FF:10038-101F2 18-64 years, mixed 43.2
FF:10155-103A2 76 years, female 39.2
Pons
Scaled Tags Per Million: 36.0
FF:10033-101E6 18-54 years, mixed 36.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 8.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 8.6
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.1
Sample A Female 9.3
Sample B Female 10.0
Sample C Male 8.1
Sample D Male 7.1
Pons
nTPM: 8.1
Samples: 4

Max nTPM: 10.2
Min nTPM: 6.9
Sample A Female 10.2
Sample B Female 8.2
Sample C Male 6.9
Sample D Male 7.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 11.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 11.6
Samples: 4

Max nTPM: 13.8
Min nTPM: 10.0
Sample A Male 12.0
Sample B Male 10.6
Sample C Female 13.8
Sample D Female 10.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.3
69407487 Antisense, RP_050414_01_G05, Mouse strain C57BL/6J (56 days, male) 1.3
Pons
Expression energy: 0.4
69407487 Antisense, RP_050414_01_G05, Mouse strain C57BL/6J (56 days, male) 0.4

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