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TMEM132A
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • TMEM132A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:86.8 nTPM
FANTOM5:38.8 Scaled Tags Per Million
Pig:33.9 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA051979
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 86.8
Samples: 300

Max nTPM: 231.6
Min nTPM: 14.4
Std nTPM: 40.7
Median nTPM: 75.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 231.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 228.4
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 226.8
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 208.9
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 206.0
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 205.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 203.7
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 193.0
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 191.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 185.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 181.7
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 180.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 175.3
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 173.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 172.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 172.3
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 172.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 171.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 160.7
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 156.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 156.2
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 155.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 155.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 150.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 148.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 148.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 143.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 142.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 140.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 140.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 138.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 137.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 137.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 137.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 136.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 136.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 136.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 133.0
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 132.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 131.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 131.4
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 130.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 130.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 129.4
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 128.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 128.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 127.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 127.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 127.0
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 126.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 126.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 124.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 121.7
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 121.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 119.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 119.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 119.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 118.7
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 118.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 118.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 117.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 116.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 116.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 116.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 114.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 114.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 114.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 114.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 113.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 113.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 113.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 112.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 112.4
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 112.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 111.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 110.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 110.0
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 109.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 109.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 107.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 107.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 107.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 106.4
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 105.2
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 104.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 104.1
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 103.3
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 103.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 101.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 99.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 99.4
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 98.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 98.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 97.3
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 97.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 96.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 96.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 96.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 95.7
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 94.8
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 94.3
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 93.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 93.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 92.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 92.4
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 92.0
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 92.0
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 91.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 91.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 90.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 90.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 90.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 88.4
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 88.3
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 87.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 86.4
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 86.1
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 85.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 84.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 84.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 83.7
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 83.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 83.3
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 83.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 82.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 82.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 82.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 82.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 81.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 81.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 81.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 81.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 81.5
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 81.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 80.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 80.4
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 80.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 79.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 79.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 79.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 78.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 78.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 77.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 77.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 77.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 77.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 76.6
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 76.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 76.4
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 75.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 75.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 75.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 75.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 75.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 74.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 74.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 74.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 74.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 74.0
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 73.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 73.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 73.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 73.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 73.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 72.2
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 71.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 71.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 71.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 70.9
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 70.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 70.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 70.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 70.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 70.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 70.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 70.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 69.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 69.3
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 68.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 68.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 68.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 67.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 67.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 67.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 67.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 67.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 67.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 66.9
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 66.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 66.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 66.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 66.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 65.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 65.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 65.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 65.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 65.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 64.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 64.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 64.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 63.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 63.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 63.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 63.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 63.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 63.0
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 62.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 62.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 62.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 62.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 61.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 61.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 61.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 61.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 60.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 60.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 59.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 59.2
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 59.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 58.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 58.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 58.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 58.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 58.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 57.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 57.8
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 57.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 57.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 57.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 57.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 56.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.4
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 55.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 54.0
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 53.9
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 53.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 53.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 53.1
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 53.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 52.7
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 52.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 52.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 52.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 51.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 51.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.6
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 51.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 51.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 50.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 50.4
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 50.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 50.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 49.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 49.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 49.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 48.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 48.5
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 48.4
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 48.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 48.2
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 48.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 47.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 47.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 47.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 47.2
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 46.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 45.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 44.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 44.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 44.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 43.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 42.7
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 41.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 41.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 41.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 41.0
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 40.4
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 39.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 39.6
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 39.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 39.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 38.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 38.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 38.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 37.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 36.2
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 34.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 34.1
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 32.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 29.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 28.6
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 26.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 26.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 25.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 24.7
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 14.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

38.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 38.8
FF:10164-103B2 76 years, female 38.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.9
Pig sample Sample description nTPM
Caudate
nTPM: 33.9
Samples: 4

Max nTPM: 38.7
Min nTPM: 24.5
Sample A Female 24.5
Sample B Female 38.6
Sample C Male 38.7
Sample D Male 33.6

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