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  • TISSUE

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  • TAC1
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:59.4 nTPM
GTEx:191.5 nTPM
FANTOM5:179.6 Scaled Tags Per Million
Pig:511.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.4
Sample id Sample description nTPM
Putamen
nTPM: 59.4
1937 Female, age 91, right hemisphere 89.2
1829 Male, age 74, unknown 83.3
2466 Female, age 79, unknown 79.9
1838 Male, age 80, right hemisphere 70.4
2489 Female, age 72, unknown 33.4
2647 Male, age 75, left hemisphere 31.6
2482 Female, age 94, left hemisphere 28.3

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 191.5
Samples: 254

Max nTPM: 732.7
Min nTPM: 1.0
Std nTPM: 146.1
Median nTPM: 161.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 732.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 679.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 625.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 573.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 541.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 537.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 514.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 506.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 495.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 492.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 491.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 486.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 481.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 460.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 459.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 449.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 449.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 424.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 423.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 416.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 413.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 410.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 407.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 400.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 397.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 393.8
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 392.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 390.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 389.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 382.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 375.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 369.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 358.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 354.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 348.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 345.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 342.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 339.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 337.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 335.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 333.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 330.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 328.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 327.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 326.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 325.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 321.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 317.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 314.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 311.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 311.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 310.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 307.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 304.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 303.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 303.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 302.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 301.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 299.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 297.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 294.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 294.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 286.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 286.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 283.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 283.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 283.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 280.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 280.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 278.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 278.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 277.6
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 268.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 267.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 264.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 258.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 255.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 250.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 250.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 250.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 250.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 249.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 247.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 246.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 245.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 244.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 244.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 238.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 238.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 236.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 233.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 230.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 226.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 226.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 226.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 224.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 221.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 221.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 217.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 217.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 213.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 213.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 203.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 202.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 202.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 199.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 199.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 199.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 198.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 196.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 195.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 194.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 194.4
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 193.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 192.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 190.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 186.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 186.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 181.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 177.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 177.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 177.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 177.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 174.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 167.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 166.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 163.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 160.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 159.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 156.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 155.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 155.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 154.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 153.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 150.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 149.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 149.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 144.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 144.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 143.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 142.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 141.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 141.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 141.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 141.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 140.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 139.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 138.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 138.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 137.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 129.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 128.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 126.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 125.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 124.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 123.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 122.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 121.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 119.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 116.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 112.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 108.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 107.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 105.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 104.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 103.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 101.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 101.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 101.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 98.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 94.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 91.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 91.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 90.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 89.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 86.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 85.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 84.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 83.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 82.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 80.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 79.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 79.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 78.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 77.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 77.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 74.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 74.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 73.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 71.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 70.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 70.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 69.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 67.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 66.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 65.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 60.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 57.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 56.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 54.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 54.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 53.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 53.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 53.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 52.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 52.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 50.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 49.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 49.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 47.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 47.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 44.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 42.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 41.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 40.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 39.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 37.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 31.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 26.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 25.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 25.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 25.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 24.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 24.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 24.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 23.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 23.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 21.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 20.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 20.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 16.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 15.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 15.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 14.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 13.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 13.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 12.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 11.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 9.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 8.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 7.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 7.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 5.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 4.1
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 3.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

179.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 179.6
FF:10176-103C5 60 years, female 179.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

511.9
Pig sample Sample description nTPM
Putamen
nTPM: 511.9
Samples: 4

Max nTPM: 902.8
Min nTPM: 142.8
Sample A Female 142.8
Sample B Female 513.0
Sample C Male 902.8
Sample D Male 489.0

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