We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CD9
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CD9
TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
Tissue methods
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:84.5 nTPM
GTEx:160.6 nTPM
FANTOM5:160.1 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody CAB002490
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.5
Sample id Sample description nTPM
Hippocampus
nTPM: 84.5
1911 Female, age 85, right hemisphere 107.8
1898 Male, age 80, left hemisphere 84.1
2529 Female, age 94, left hemisphere 84.0
1855 Male, age 76, left hemisphere 78.6
2621 Female, age 67, right hemisphere 78.6
2148 Female, age 91, left hemisphere 73.7

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

160.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 160.6
Samples: 255

Max nTPM: 470.1
Min nTPM: 29.4
Std nTPM: 80.4
Median nTPM: 141.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 470.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 468.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 454.5
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 403.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 389.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 353.2
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 334.2
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 328.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 327.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 319.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 317.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 314.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 312.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 306.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 303.5
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 300.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 300.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 300.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 300.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 299.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 298.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 296.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 293.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 292.2
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 288.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 283.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 282.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 272.1
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 271.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 262.9
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 259.4
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 256.6
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 254.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 252.1
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 250.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 249.7
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 249.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 248.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 243.6
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 243.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 242.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 239.2
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 238.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 236.7
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 232.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 231.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 228.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 227.0
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 225.8
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 223.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 222.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 220.4
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 220.3
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 218.4
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 217.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 209.6
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 208.6
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 205.7
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 201.7
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 200.2
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 199.0
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 198.2
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 196.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 196.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 196.3
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 196.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 194.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 193.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 191.8
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 190.9
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 189.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 189.2
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 187.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 187.3
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 186.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 186.4
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 186.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 184.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 184.5
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 183.7
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 183.4
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 182.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 181.1
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 180.4
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 178.4
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 177.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 177.2
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 175.9
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 174.8
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 172.6
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 172.2
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 170.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 168.9
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 168.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 168.0
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 167.8
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 167.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 167.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 166.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 165.8
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 165.1
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 164.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 164.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 164.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 163.8
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 160.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 160.3
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 157.9
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 157.7
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 156.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 156.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 154.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 153.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 152.8
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 152.5
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 152.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 152.2
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 151.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 151.1
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 150.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 149.9
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 147.8
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 147.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 147.3
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 147.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 146.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 142.6
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 141.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 141.4
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 141.3
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 140.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 138.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 138.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 137.6
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 137.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 135.9
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 134.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 134.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 133.4
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 133.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 132.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 132.5
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 132.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 132.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 129.8
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 129.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 129.0
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 128.2
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 128.1
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 127.6
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 127.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 125.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 125.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 125.0
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 124.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 123.8
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 123.7
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 123.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 122.3
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 121.8
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 120.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 120.5
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 119.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 118.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 118.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 118.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 117.7
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 116.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 116.7
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 116.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 115.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 115.4
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 112.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 112.3
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 111.6
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 111.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 110.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 110.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 109.6
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 109.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 109.3
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 108.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 107.8
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 107.5
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 106.5
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 106.1
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 106.1
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 105.9
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 105.0
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 104.4
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 104.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 103.9
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 103.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 103.8
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 103.2
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 101.7
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 101.4
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 100.8
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 100.7
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 100.2
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 99.0
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 96.4
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 94.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 93.6
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 93.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 93.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 91.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 88.9
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 88.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 88.5
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 88.4
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 88.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 87.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 86.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 85.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 85.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 84.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 84.4
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 82.0
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 79.5
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 79.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 79.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 78.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 78.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 77.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 77.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 76.1
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 74.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 74.0
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 73.3
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 71.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 71.3
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 70.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 70.5
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 70.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 70.1
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 70.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 69.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 69.5
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 69.1
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 66.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 66.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 66.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 63.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 63.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 62.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 62.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 61.0
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 58.8
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 55.7
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 47.9
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 44.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 34.4
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 30.2
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 29.4
Show allShow less

HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

160.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 160.1
FF:10153-102I9 76 years, female 184.2
FF:10169-103B7 60 years, female 136.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo