PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:158.6 nTPM
FANTOM5:178.6 Scaled Tags Per Million
Pig:63.3 nTPM
Mouse:68.6 nTPM
Allen mouse:6.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 158.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 124.8
2301 Female, age 85, both hemispheres 146.4
2090 Male, age 80, both hemispheres 146.1
2188 Female, age 91, both hemispheres 141.9
1984 Male, age 76, both hemispheres 64.9
Area postrema
nTPM: 141.7
2306 Male, age 80, both hemispheres 170.7
2799 Male, age 61, both hemispheres 161.8
2054 Male, age 76, both hemispheres 92.5
Dorsal cochlear nucleus
nTPM: 117.9
2058 Male, age 76, both hemispheres 128.8
2378 Male, age 80, both hemispheres 126.2
2370 Male, age 61, both hemispheres 114.6
2802 Male, age 74, right hemisphere 112.8
2187 Female, age 91, both hemispheres 106.9
Dorsal medullary reticular nucleus
nTPM: 133.0
2088 Male, age 76, both hemispheres 150.2
2373 Male, age 61, both hemispheres 137.9
2040 Female, age 85, both hemispheres 111.0
Dorsal motor vagal complex
nTPM: 106.3
2185 Male, age 76, both hemispheres 179.8
2643 Male, age 74, both hemispheres 121.7
2797 Male, age 61, both hemispheres 105.5
2807 Female, age 85, both hemispheres 102.1
2133 Female, age 91, both hemispheres 91.1
2000 Male, age 74, unknown 89.3
2813 Female, age 72, unknown 84.6
2844 Male, age 55, unknown 76.6
Dorsal tegmental nucleus
nTPM: 122.8
2083 Male, age 80, both hemispheres 140.2
2358 Male, age 61, both hemispheres 125.8
1936 Male, age 76, left hemisphere 114.2
2326 Male, age 74, both hemispheres 111.0
Dorsolateral tegmental area
nTPM: 128.2
2337 Male, age 61, both hemispheres 190.9
2654 Male, age 80, both hemispheres 134.0
2751 Female, age 85, both hemispheres 131.4
2360 Male, age 74, both hemispheres 93.6
2141 Male, age 76, both hemispheres 90.9
Gigantocellular reticular nuclei, medullary
nTPM: 113.9
2314 Male, age 61, both hemispheres 139.8
2387 Female, age 91, both hemispheres 119.1
1876 Female, age 85, both hemispheres 118.5
2022 Male, age 76, right hemisphere 117.9
2310 Male, age 80, both hemispheres 115.6
2462 Male, age 74, both hemispheres 72.7
Gigantocellular reticular nuclei, pars
nTPM: 119.4
2336 Male, age 61, both hemispheres 132.1
2330 Male, age 80, both hemispheres 128.5
2706 Male, age 80, both hemispheres 126.5
2084 Female, age 85, both hemispheres 118.6
2168 Male, age 76, both hemispheres 91.0
Inferior olive
nTPM: 111.5
2178 Male, age 61, both hemispheres 137.0
2628 Female, age 91, both hemispheres 118.9
2085 Female, age 85, both hemispheres 103.8
2379 Male, age 80, both hemispheres 102.8
2563 Male, age 74, both hemispheres 95.1
Kolliker-Fuse nucleus
nTPM: 113.0
2793 Female, age 91, left hemisphere 151.4
2163 Male, age 80, both hemispheres 119.8
2315 Male, age 76, right hemisphere 67.9
Lateral lemniscal nuclei
nTPM: 114.3
2320 Female, age 91, left hemisphere 146.9
2746 Female, age 85, left hemisphere 123.8
2036 Male, age 80, both hemispheres 104.7
2453 Male, age 74, right hemisphere 100.4
2169 Male, age 76, both hemispheres 95.5
Lateral medullary reticular nucleus
nTPM: 126.2
2852 Male, age 80, both hemispheres 168.7
2374 Male, age 61, both hemispheres 138.1
2190 Female, age 85, both hemispheres 130.2
2305 Male, age 74, both hemispheres 124.7
2044 Male, age 76, both hemispheres 110.6
2804 Female, age 91, both hemispheres 85.0
Lateral parabrachial nucleus
nTPM: 136.8
2790 Male, age 61, both hemispheres 176.8
2792 Male, age 76, both hemispheres 144.1
2013 Male, age 80, both hemispheres 136.7
2139 Female, age 85, right hemisphere 89.7
Lateral vestibular nucleus
nTPM: 124.0
2184 Male, age 76, both hemispheres 134.1
2311 Male, age 80, both hemispheres 113.9
Locus coeruleus
nTPM: 74.5
2720 Male, age 74, both hemispheres 93.8
2162 Male, age 80, both hemispheres 91.5
2317 Female, age 72, unknown 80.1
1980 Male, age 76, both hemispheres 76.6
2123 Female, age 91, both hemispheres 63.5
2788 Male, age 74, unknown 59.1
2014 Male, age 55, unknown 57.0
Medial olivary nucleus
nTPM: 140.5
1943 Male, age 61, both hemispheres 186.2
2851 Male, age 80, both hemispheres 153.4
1962 Male, age 76, both hemispheres 114.8
2138 Female, age 91, both hemispheres 107.5
Medial parabrachial nucleus
nTPM: 129.5
2156 Male, age 61, both hemispheres 159.0
2786 Male, age 76, both hemispheres 143.9
2170 Female, age 91, both hemispheres 119.4
2463 Female, age 85, right hemisphere 113.4
2854 Male, age 80, both hemispheres 111.5
Medial periolivary nuclei
nTPM: 108.2
2081 Male, age 80, both hemispheres 154.9
2458 Female, age 91, both hemispheres 132.4
2791 Male, age 74, right hemisphere 102.8
2063 Male, age 76, both hemispheres 80.5
2171 Female, age 85, both hemispheres 70.1
Medial vestibular nucleus
nTPM: 101.8
2093 Male, age 80, both hemispheres 116.5
2624 Male, age 61, both hemispheres 113.5
2803 Female, age 91, both hemispheres 108.8
2801 Male, age 74, both hemispheres 100.1
2743 Female, age 85, both hemispheres 90.0
2134 Male, age 76, both hemispheres 82.0
Motor facial nucleus
nTPM: 112.6
2697 Female, age 85, both hemispheres 159.3
2126 Male, age 61, both hemispheres 138.7
2327 Male, age 80, both hemispheres 105.4
2365 Male, age 74, right hemisphere 104.2
2795 Female, age 91, both hemispheres 96.5
2062 Male, age 76, both hemispheres 71.3
Motor hypoglossal nucleus
nTPM: 113.9
2182 Male, age 80, both hemispheres 159.7
2132 Female, age 85, both hemispheres 122.7
2125 Female, age 91, both hemispheres 114.4
2461 Male, age 61, both hemispheres 90.4
2277 Male, age 76, both hemispheres 82.5
Motor trigeminal nucleus
nTPM: 132.8
2309 Male, age 76, both hemispheres 146.6
2321 Female, age 91, both hemispheres 138.6
2335 Male, age 61, both hemispheres 129.4
2560 Male, age 74, both hemispheres 129.1
2079 Male, age 80, both hemispheres 120.3
Nuclei of the trapezoid body
nTPM: 90.2
2166 Male, age 80, both hemispheres 128.7
2368 Female, age 91, both hemispheres 99.7
2159 Male, age 61, both hemispheres 88.5
1983 Male, age 76, both hemispheres 74.6
2735 Female, age 85, both hemispheres 59.5
Nucleus ambiguus
nTPM: 150.3
2096 Female, age 85, both hemispheres 170.1
2071 Male, age 76, both hemispheres 130.5
Nucleus cuneatus
nTPM: 130.6
2808 Female, age 85, both hemispheres 157.9
2380 Male, age 80, both hemispheres 149.5
2100 Male, age 76, both hemispheres 142.7
2805 Female, age 91, both hemispheres 125.9
2376 Male, age 61, both hemispheres 125.5
2381 Male, age 80, both hemispheres 123.3
2562 Male, age 61, both hemispheres 122.1
2131 Male, age 76, both hemispheres 118.6
2564 Male, age 74, both hemispheres 109.8
Nucleus gracilis
nTPM: 158.6
2382 Male, age 80, both hemispheres 181.7
2299 Female, age 85, both hemispheres 161.0
2627 Male, age 74, both hemispheres 133.2
Nucleus raphe magnus
nTPM: 90.5
2328 Male, age 80, both hemispheres 121.0
2459 Female, age 91, both hemispheres 121.0
2051 Male, age 76, both hemispheres 113.7
2455 Male, age 74, both hemispheres 86.4
2172 Female, age 85, both hemispheres 54.1
2160 Male, age 61, both hemispheres 46.9
Nucleus raphe obscurus
nTPM: 146.7
2142 Male, age 76, midline 159.8
2845 Female, age 85, midline 143.3
2800 Male, age 61, midline 137.0
Nucleus raphe pallidus
nTPM: 148.5
1924 Male, age 61, midline 184.6
2183 Male, age 80, midline 135.5
2145 Male, age 76, midline 125.3
Nucleus tractus solitarii
nTPM: 76.0
2307 Male, age 80, both hemispheres 100.6
2656 Male, age 76, both hemispheres 95.2
2191 Female, age 85, both hemispheres 67.8
2144 Female, age 91, right hemisphere 40.4
Paramedian reticular nucleus
nTPM: 106.7
2057 Male, age 80, both hemispheres 124.7
2052 Male, age 76, both hemispheres 109.3
2313 Male, age 61, both hemispheres 99.1
2050 Female, age 85, both hemispheres 93.8
Parvicellular reticular nuclei
nTPM: 119.2
2119 Male, age 80, both hemispheres 129.5
2095 Male, age 76, both hemispheres 121.2
2558 Male, age 74, both hemispheres 106.8
Parvicellular reticular nuclei, medullary
nTPM: 109.5
2189 Female, age 91, both hemispheres 123.3
2091 Female, age 85, both hemispheres 103.7
2181 Male, age 80, left hemisphere 101.6
Pedunculopontine tegmental nucleus
nTPM: 123.9
2338 Male, age 61, both hemispheres 161.5
2334 Male, age 80, both hemispheres 118.8
1921 Female, age 85, both hemispheres 91.5
Peritrigeminal nucleus
nTPM: 113.4
2179 Male, age 61, both hemispheres 119.7
2067 Female, age 85, both hemispheres 114.0
2136 Male, age 76, both hemispheres 106.5
Pontine nuclei
nTPM: 126.4
2115 Male, age 80, left hemisphere 170.8
2319 Female, age 91, both hemispheres 155.3
2454 Male, age 74, left hemisphere 153.9
1968 Male, age 76, left hemisphere 129.4
2109 Female, age 72, unknown 125.2
1863 Male, age 55, unknown 108.7
2787 Female, age 85, both hemispheres 93.3
2727 Male, age 61, right hemisphere 74.4
Pontine raphe nucleus
nTPM: 93.8
2853 Male, age 76, midline 100.4
2122 Female, age 85, midline 87.2
Posteroventral cochlear nucleus
nTPM: 134.9
2135 Female, age 91, both hemispheres 183.2
2341 Male, age 80, both hemispheres 146.0
2070 Male, age 76, both hemispheres 142.3
2371 Male, age 61, both hemispheres 119.0
2752 Female, age 85, both hemispheres 83.8
Prepositus hypoglossal nucleus
nTPM: 94.3
2855 Female, age 85, right hemisphere 99.9
2086 Male, age 80, both hemispheres 88.6
Principal sensory trigeminal nucleus
nTPM: 103.4
2367 Female, age 91, left hemisphere 134.0
2324 Male, age 76, both hemispheres 125.9
2008 Male, age 80, left hemisphere 86.9
2158 Male, age 61, both hemispheres 66.7
Reticular pontine nucleus, caudal
nTPM: 124.9
2457 Female, age 91, both hemispheres 139.3
2559 Male, age 74, both hemispheres 137.9
2092 Male, age 76, both hemispheres 115.3
2332 Male, age 80, right hemisphere 106.9
Reticular pontine nucleus, oral
nTPM: 137.3
2366 Female, age 91, both hemispheres 166.6
2167 Male, age 76, both hemispheres 148.6
1939 Male, age 80, both hemispheres 147.1
2361 Male, age 74, both hemispheres 115.0
2012 Female, age 85, both hemispheres 109.1
Reticulotegmental nucleus
nTPM: 108.8
2452 Male, age 74, both hemispheres 124.9
2333 Male, age 80, both hemispheres 119.8
2322 Female, age 91, both hemispheres 102.6
2325 Male, age 76, both hemispheres 88.1
Spinal trigeminal nucleus, caudal
nTPM: 125.3
2312 Male, age 61, both hemispheres 145.2
2308 Male, age 80, both hemispheres 141.7
2642 Male, age 74, both hemispheres 129.2
2447 Male, age 76, both hemispheres 114.2
2390 Female, age 91, both hemispheres 96.5
Spinal trigeminal nucleus, interpolar
nTPM: 96.1
2033 Male, age 80, both hemispheres 112.0
2386 Female, age 85, both hemispheres 102.3
2389 Female, age 91, both hemispheres 100.4
2625 Male, age 61, both hemispheres 84.3
2066 Male, age 76, right hemisphere 81.7
Spinal trigeminal nucleus, oral
nTPM: 114.1
2164 Male, age 80, both hemispheres 133.9
1978 Male, age 76, both hemispheres 125.3
2737 Female, age 85, both hemispheres 83.1
Spinal vestibular nucleus
nTPM: 128.0
2748 Male, age 76, both hemispheres 182.3
2384 Male, age 74, both hemispheres 127.8
2780 Male, age 80, both hemispheres 125.6
2806 Female, age 85, both hemispheres 119.4
2186 Female, age 91, both hemispheres 113.6
2796 Male, age 61, both hemispheres 99.6
Subcoeruleus area
nTPM: 118.8
2369 Female, age 85, left hemisphere 158.4
2089 Male, age 76, left hemisphere 120.9
2451 Male, age 74, both hemispheres 116.9
2323 Female, age 91, left hemisphere 104.2
1958 Male, age 80, both hemispheres 93.8
Superior olive
nTPM: 115.3
2329 Male, age 80, right hemisphere 135.6
2020 Male, age 76, both hemispheres 118.4
2561 Female, age 91, both hemispheres 118.0
2364 Male, age 74, right hemisphere 102.7
1875 Female, age 85, both hemispheres 101.5
Superior vestibular nucleus
nTPM: 95.3
2061 Male, age 76, both hemispheres 104.4
2015 Male, age 80, both hemispheres 100.9
2383 Male, age 74, both hemispheres 80.7
Ventral medullary reticular nucleus
nTPM: 157.6
2060 Male, age 76, both hemispheres 179.7
2372 Male, age 61, both hemispheres 135.5
Ventral periolivary nuclei
nTPM: 98.1
2023 Male, age 76, both hemispheres 114.9
2794 Female, age 91, left hemisphere 100.3
2165 Male, age 80, both hemispheres 97.2
2130 Female, age 85, both hemispheres 80.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 112.2
2118 Male, age 80, both hemispheres 146.1
2180 Male, age 61, both hemispheres 120.2
1986 Male, age 76, both hemispheres 105.3
2741 Female, age 85, both hemispheres 98.0
2302 Female, age 91, both hemispheres 91.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 122.8
2359 Male, age 61, both hemispheres 160.5
2456 Female, age 91, both hemispheres 137.3
2840 Female, age 85, both hemispheres 121.8
2161 Male, age 80, both hemispheres 117.6
1959 Male, age 76, both hemispheres 103.1
2449 Male, age 74, both hemispheres 96.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 178.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 178.6
FF:10165-103B3 76 years, female 185.4
FF:10182-103D2 60 years, female 171.8
Medulla oblongata
Scaled Tags Per Million: 141.0
FF:10038-101F2 18-64 years, mixed 226.2
FF:10155-103A2 76 years, female 119.2
FF:10174-103C3 60 years, female 77.5
Pons
Scaled Tags Per Million: 177.4
FF:10033-101E6 18-54 years, mixed 177.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 63.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 63.3
Samples: 4

Max nTPM: 71.4
Min nTPM: 56.4
Sample A Female 63.4
Sample B Female 56.4
Sample C Male 71.4
Sample D Male 62.0
Pons
nTPM: 45.4
Samples: 4

Max nTPM: 54.5
Min nTPM: 40.1
Sample A Female 40.2
Sample B Female 46.8
Sample C Male 40.1
Sample D Male 54.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 68.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 68.7
Samples: 4

Max nTPM: 72.4
Min nTPM: 64.1
Sample A Male 72.4
Sample B Male 69.5
Sample C Female 68.6
Sample D Female 64.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.5
69169851 Antisense, RP_050321_04_C12, Mouse strain C57BL/6J (56 days, male) 6.5
Pons
Expression energy: 5.3
69169851 Antisense, RP_050321_04_C12, Mouse strain C57BL/6J (56 days, male) 5.3

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